RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C YOR385WQ08909 290 aa4.21□□□□□ -1.74
RPT6YGL048C HUG1Q6Q5K6 68 aa4.21□□□□□ -1.74
RPT6YGL048C HTL1Q9URQ5 78 aa4.21□□□□□ -1.74
RPT6YGL048C YBL081WP38180 368 aaKnown RBP4.2□□□□□ -1.74
RPT6YGL048C LAG1P38703 411 aa4.2□□□□□ -1.74
RPT6YGL048C HPA3P39979 161 aa4.2□□□□□ -1.74
RPT6YGL048C YFR045WP43617 309 aa4.2□□□□□ -1.74
RPT6YGL048C VPS55P47111 140 aa4.2□□□□□ -1.74
RPT6YGL048C ARP3P47117 449 aaKnown RBP4.2□□□□□ -1.74
RPT6YGL048C LPP1Q04396 274 aa4.2□□□□□ -1.74
RPT6YGL048C JID1Q12350 301 aa4.2□□□□□ -1.74
RPT6YGL048C YHR212W-AP0CX91 67 aa4.19□□□□□ -1.74
RPT6YGL048C FUN14P18411 198 aa4.19□□□□□ -1.74
RPT6YGL048C RPL14AP36105 138 aaKnown RBP4.19□□□□□ -1.74
RPT6YGL048C MIG1P27705 504 aa4.18□□□□□ -1.74
RPT6YGL048C PAM17P36147 197 aa4.18□□□□□ -1.74
RPT6YGL048C YPT10P38146 199 aa4.18□□□□□ -1.74
RPT6YGL048C SNN1P48232 102 aa4.18□□□□□ -1.74
RPT6YGL048C FMP41P53889 259 aaKnown RBP4.18□□□□□ -1.74
RPT6YGL048C HOR7Q05827 59 aa4.18□□□□□ -1.74
RPT6YGL048C TIM18Q08749 192 aa4.18□□□□□ -1.74
RPT6YGL048C YPL229WQ99395 206 aa4.18□□□□□ -1.74
RPT6YGL048C HMRA1P0CY11 126 aa4.17□□□□□ -1.74
RPT6YGL048C AHT1P29589 182 aa4.17□□□□□ -1.74
RPT6YGL048C SSS1P35179 80 aa4.17□□□□□ -1.74
RPT6YGL048C PET8P38921 284 aa4.17□□□□□ -1.74
RPT6YGL048C YER181CP40097 107 aa4.17□□□□□ -1.74
RPT6YGL048C SWM2P40342 146 aa4.17□□□□□ -1.74
RPT6YGL048C PHS1P40857 217 aa4.17□□□□□ -1.74
RPT6YGL048C CRH1P53301 507 aa4.17□□□□□ -1.74
RPT6YGL048C ATG5Q12380 294 aa4.17□□□□□ -1.74
RPT6YGL048C RPB3P16370 318 aaKnown RBP4.16□□□□□ -1.74
RPT6YGL048C MRS4P23500 304 aa4.16□□□□□ -1.74
RPT6YGL048C YMR090WQ04304 227 aaKnown RBP4.16□□□□□ -1.74
RPT6YGL048C YPL162CQ12042 273 aa4.16□□□□□ -1.74
RPT6YGL048C YNL162W-AQ3E7A8 72 aa4.16□□□□□ -1.74
RPT6YGL048C YHR138CP38841 114 aaPredicted RBP4.15□□□□□ -1.75
RPT6YGL048C YAR029WP39549 74 aa4.15□□□□□ -1.75
RPT6YGL048C YGL088WP53151 121 aa4.15□□□□□ -1.75
RPT6YGL048C YGR050CP53231 118 aa4.15□□□□□ -1.75
RPT6YGL048C SMD1Q02260 146 aaPredicted RBP4.15□□□□□ -1.75
RPT6YGL048C YHP1Q04116 353 aa4.15□□□□□ -1.75
RPT6YGL048C SOD1P00445 154 aaKnown RBP4.14□□□□□ -1.75
RPT6YGL048C NOP1P15646 327 aaKnown RBP4.14□□□□□ -1.75
RPT6YGL048C RPL16AP26784 199 aaKnown RBP4.14□□□□□ -1.75
RPT6YGL048C PRM3Q08931 133 aa4.14□□□□□ -1.75
RPT6YGL048C TDA8Q6B2U8 126 aa4.14□□□□□ -1.75
RPT6YGL048C KSH1Q8TGJ3 72 aa4.14□□□□□ -1.75
RPT6YGL048C UTR5P32630 166 aa4.13□□□□□ -1.75
RPT6YGL048C LST8P41318 303 aa4.13□□□□□ -1.75
RPT6YGL048C ERG25P53045 309 aa4.13□□□□□ -1.75
RPT6YGL048C EST3Q03096 181 aa4.13□□□□□ -1.75
RPT6YGL048C YOL029CQ08187 201 aa4.13□□□□□ -1.75
RPT6YGL048C IRC23Q08416 157 aa4.13□□□□□ -1.75
RPT6YGL048C YDR029WQ12111 104 aa4.13□□□□□ -1.75
RPT6YGL048C COA6Q3E846 104 aa4.13□□□□□ -1.75
RPT6YGL048C YHR139C-AO13536 103 aa4.12□□□□□ -1.75
RPT6YGL048C RPS8AP0CX39 200 aaKnown RBP4.12□□□□□ -1.75
RPT6YGL048C RPS8BP0CX40 200 aaKnown RBP4.12□□□□□ -1.75
RPT6YGL048C MRPL38P35996 138 aaPredicted RBP4.12□□□□□ -1.75
RPT6YGL048C SDS23P53172 527 aa4.12□□□□□ -1.75
RPT6YGL048C SWT21P53873 357 aaPredicted RBP4.12□□□□□ -1.75
RPT6YGL048C FSH2Q05015 223 aa4.12□□□□□ -1.75
RPT6YGL048C YBL008W-AQ3E821 79 aa4.12□□□□□ -1.75
RPT6YGL048C YFR032C-BQ8TGU2 87 aa4.12□□□□□ -1.75
RPT6YGL048C ECM12O13529 151 aa4.11□□□□□ -1.75
RPT6YGL048C PAI3P01094 68 aa4.11□□□□□ -1.75
RPT6YGL048C UBC4P15731 148 aa4.11□□□□□ -1.75
RPT6YGL048C AGA1P32323 725 aa4.11□□□□□ -1.75
RPT6YGL048C LSM2P38203 95 aaKnown RBP4.11□□□□□ -1.75
RPT6YGL048C IRC22P40006 225 aa4.11□□□□□ -1.75
RPT6YGL048C YFL065CP43539 102 aa4.11□□□□□ -1.75
RPT6YGL048C YMR181CQ03231 154 aa4.11□□□□□ -1.75
RPT6YGL048C CUE4Q04201 117 aaPredicted RBP4.11□□□□□ -1.75
RPT6YGL048C YPR203WQ08994 102 aa4.11□□□□□ -1.75
RPT6YGL048C YGL258W-AQ3E740 77 aa4.11□□□□□ -1.75
RPT6YGL048C YCR024C-BQ3E7Z8 88 aa4.11□□□□□ -1.75
RPT6YGL048C HSP12P22943 109 aaKnown RBP4.1□□□□□ -1.75
RPT6YGL048C AUA1P32450 94 aa4.1□□□□□ -1.75
RPT6YGL048C YRA2P36036 203 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
RPT6YGL048C SMP1P38128 452 aa4.1□□□□□ -1.75
RPT6YGL048C EDC2P40023 145 aaPredicted RBP4.1□□□□□ -1.75
RPT6YGL048C SEN15Q04675 128 aa4.1□□□□□ -1.75
RPT6YGL048C YOL014WQ08110 124 aa4.1□□□□□ -1.75
RPT6YGL048C RPL23AP0CX41 137 aaKnown RBP4.09□□□□□ -1.75
RPT6YGL048C RPL23BP0CX42 137 aaKnown RBP4.09□□□□□ -1.75
RPT6YGL048C INO4P13902 151 aa4.09□□□□□ -1.75
RPT6YGL048C FLO5P38894 1075 aa4.09□□□□□ -1.75
RPT6YGL048C YAR068WP39564 161 aa4.09□□□□□ -1.75
RPT6YGL048C YER134CP40081 178 aa4.09□□□□□ -1.75
RPT6YGL048C MRPS16Q02608 121 aa4.09□□□□□ -1.75
RPT6YGL048C YML100W-AQ8TGT0 57 aa4.09□□□□□ -1.75
RPT6YGL048C TRP1P00912 224 aa4.08□□□□□ -1.76
RPT6YGL048C MSL1P40567 111 aaPredicted RBP4.08□□□□□ -1.76
RPT6YGL048C YLR281CQ05863 155 aa4.08□□□□□ -1.76
RPT6YGL048C YPR013CQ12145 317 aa4.08□□□□□ -1.76
RPT6YGL048C DFM1Q12743 341 aaKnown RBP4.08□□□□□ -1.76
RPT6YGL048C MRP17P28778 131 aa4.07□□□□□ -1.76
RPT6YGL048C RPA12P32529 125 aaKnown RBP4.07□□□□□ -1.76
RPT6YGL048C MPC2P38857 129 aa4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms