RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W UTP23Q12339 254 aaKnown RBP0.78□□□□□ -2.28
SMC1YFL008W YPR145C-AQ2V2P0 78 aa0.78□□□□□ -2.28
SMC1YFL008W SPO24Q3E752 67 aa0.78□□□□□ -2.28
SMC1YFL008W YFL041W-AQ3E817 63 aa0.78□□□□□ -2.28
SMC1YFL008W YCR075W-AQ3E830 75 aa0.78□□□□□ -2.28
SMC1YFL008W MBF1O14467 151 aaKnown RBP0.78□□□□□ -2.29
SMC1YFL008W CPA1P07258 411 aaKnown RBP0.78□□□□□ -2.29
SMC1YFL008W KRE1P17260 313 aa0.78□□□□□ -2.29
SMC1YFL008W MDH2P22133 377 aa0.78□□□□□ -2.29
SMC1YFL008W MRS4P23500 304 aa0.78□□□□□ -2.29
SMC1YFL008W VMA11P32842 164 aa0.78□□□□□ -2.29
SMC1YFL008W TRM7P38238 310 aaKnown RBP0.78□□□□□ -2.29
SMC1YFL008W TEM1P38987 245 aa0.78□□□□□ -2.29
SMC1YFL008W YFL012WP43580 148 aa0.78□□□□□ -2.29
SMC1YFL008W DSK2P48510 373 aa0.78□□□□□ -2.29
SMC1YFL008W YGL235WP53071 178 aa0.78□□□□□ -2.29
SMC1YFL008W YNL046WP53956 172 aa0.78□□□□□ -2.29
SMC1YFL008W ATP19P81451 68 aa0.78□□□□□ -2.29
SMC1YFL008W MET31Q03081 177 aa0.78□□□□□ -2.29
SMC1YFL008W INP1Q03694 420 aa0.78□□□□□ -2.29
SMC1YFL008W FSH2Q05015 223 aa0.78□□□□□ -2.29
SMC1YFL008W DPP1Q05521 289 aa0.78□□□□□ -2.29
SMC1YFL008W YLR296WQ05898 108 aa0.78□□□□□ -2.29
SMC1YFL008W CSI2Q08054 341 aa0.78□□□□□ -2.29
SMC1YFL008W YMR030W-AQ3E760 96 aa0.78□□□□□ -2.29
SMC1YFL008W YNL277W-AQ3E7Z0 62 aa0.78□□□□□ -2.29
SMC1YFL008W YAL064W-BO13512 126 aa0.77□□□□□ -2.29
SMC1YFL008W CTA1P15202 515 aa0.77□□□□□ -2.29
SMC1YFL008W CWP1P28319 239 aa0.77□□□□□ -2.29
SMC1YFL008W NTF2P33331 125 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W YBR013CP38215 129 aa0.77□□□□□ -2.29
SMC1YFL008W PHO88P38264 188 aaPredicted RBP0.77□□□□□ -2.29
SMC1YFL008W UMP1P38293 148 aa0.77□□□□□ -2.29
SMC1YFL008W YEL073CP39974 107 aa0.77□□□□□ -2.29
SMC1YFL008W YER188WP40103 239 aa0.77□□□□□ -2.29
SMC1YFL008W MMS2P53152 137 aa0.77□□□□□ -2.29
SMC1YFL008W TRM112P53738 135 aaPredicted RBP0.77□□□□□ -2.29
SMC1YFL008W POP3P53833 195 aaPredicted RBP0.77□□□□□ -2.29
SMC1YFL008W COX12Q01519 83 aa0.77□□□□□ -2.29
SMC1YFL008W YDR042CQ03205 200 aa0.77□□□□□ -2.29
SMC1YFL008W YDR209CQ03480 137 aa0.77□□□□□ -2.29
SMC1YFL008W GPI19Q04082 140 aa0.77□□□□□ -2.29
SMC1YFL008W ELP6Q04868 273 aa0.77□□□□□ -2.29
SMC1YFL008W SHH4Q06236 168 aa0.77□□□□□ -2.29
SMC1YFL008W YDR029WQ12111 104 aa0.77□□□□□ -2.29
SMC1YFL008W USB1Q12208 290 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W YPR011CQ12251 326 aa0.77□□□□□ -2.29
SMC1YFL008W MRPL23Q12487 163 aaPredicted RBP0.77□□□□□ -2.29
SMC1YFL008W ENV10Q99382 181 aa0.77□□□□□ -2.29
SMC1YFL008W CCW14O13547 238 aa0.77□□□□□ -2.29
SMC1YFL008W POR1P04840 283 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W YPL073CP40323 161 aa0.77□□□□□ -2.29
SMC1YFL008W YGL034CP53186 121 aa0.77□□□□□ -2.29
SMC1YFL008W RRT7Q07829 113 aa0.77□□□□□ -2.29
SMC1YFL008W YOR186WQ08560 144 aa0.77□□□□□ -2.29
SMC1YFL008W FIT3Q08907 204 aa0.77□□□□□ -2.29
SMC1YFL008W YDL157CQ12082 118 aa0.77□□□□□ -2.29
SMC1YFL008W YKL183C-AQ3E765 70 aa0.77□□□□□ -2.29
SMC1YFL008W ISD11Q6Q560 94 aa0.77□□□□□ -2.29
SMC1YFL008W VPS63O13549 108 aa0.77□□□□□ -2.29
SMC1YFL008W YPR096CO13587 100 aa0.77□□□□□ -2.29
SMC1YFL008W RPL28P02406 149 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W HMRA2P0CY13 119 aa0.77□□□□□ -2.29
SMC1YFL008W UBC5P15732 148 aa0.77□□□□□ -2.29
SMC1YFL008W YMR31P19955 123 aa0.77□□□□□ -2.29
SMC1YFL008W PEX34P25584 144 aa0.77□□□□□ -2.29
SMC1YFL008W FPR2P32472 135 aa0.77□□□□□ -2.29
SMC1YFL008W RPB7P34087 171 aa0.77□□□□□ -2.29
SMC1YFL008W MSA2P36157 363 aa0.77□□□□□ -2.29
SMC1YFL008W YBL081WP38180 368 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W ERG28P40030 148 aa0.77□□□□□ -2.29
SMC1YFL008W YER121WP40076 114 aa0.77□□□□□ -2.29
SMC1YFL008W YNL200CP40165 246 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W YIA6P40556 373 aa0.77□□□□□ -2.29
SMC1YFL008W CUP9P41817 306 aa0.77□□□□□ -2.29
SMC1YFL008W CWP2P43497 92 aa0.77□□□□□ -2.29
SMC1YFL008W FIP1P45976 327 aa0.77□□□□□ -2.29
SMC1YFL008W SKI6P46948 246 aaPredicted RBP0.77□□□□□ -2.29
SMC1YFL008W NRM1P53718 249 aa0.77□□□□□ -2.29
SMC1YFL008W EST3Q03096 181 aa0.77□□□□□ -2.29
SMC1YFL008W LSM6Q06406 86 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W RRS1Q08746 203 aaKnown RBP0.77□□□□□ -2.29
SMC1YFL008W DAD1Q12248 94 aa0.77□□□□□ -2.29
SMC1YFL008W IGO2Q9P305 131 aa0.77□□□□□ -2.29
SMC1YFL008W BET1P22804 142 aa0.76□□□□□ -2.29
SMC1YFL008W YSY6P38374 65 aa0.76□□□□□ -2.29
SMC1YFL008W EMC4P53073 190 aa0.76□□□□□ -2.29
SMC1YFL008W CPD1P53314 239 aa0.76□□□□□ -2.29
SMC1YFL008W VPS71Q03433 280 aa0.76□□□□□ -2.29
SMC1YFL008W YMR082CQ04276 118 aa0.76□□□□□ -2.29
SMC1YFL008W SEN15Q04675 128 aa0.76□□□□□ -2.29
SMC1YFL008W SYM1Q06563 197 aa0.76□□□□□ -2.29
SMC1YFL008W DGA1Q08650 418 aa0.76□□□□□ -2.29
SMC1YFL008W PRM3Q08931 133 aa0.76□□□□□ -2.29
SMC1YFL008W TSC3Q3E790 80 aa0.76□□□□□ -2.29
SMC1YFL008W FLO9P39712 1322 aa0.76□□□□□ -2.29
SMC1YFL008W SPS100P13130 326 aa0.76□□□□□ -2.29
SMC1YFL008W KTI12P34253 313 aaKnown RBP0.76□□□□□ -2.29
SMC1YFL008W YHL018WP38744 120 aaPredicted RBP0.76□□□□□ -2.29
SMC1YFL008W YHR173CP38864 112 aa0.76□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms