RNA–Protein interactions for RNA: YER171W

RAD3, Transcript of 5' to 3' DNA helicase, yeast

Gene RAD3, Length 2,337 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD3	YER171W	DPP1	Q05521	289 aa		4.63	□□□□□ -1.67
RAD3	YER171W	YFL068W	P0CX99	160 aa		4.62	□□□□□ -1.67
RAD3	YER171W	YLL066W-A	P0CY00	160 aa		4.62	□□□□□ -1.67
RAD3	YER171W	YLL067W-A	P0CY01	160 aa		4.62	□□□□□ -1.67
RAD3	YER171W	YNL194C	P40169	301 aa		4.62	□□□□□ -1.67
RAD3	YER171W	MSL1	P40567	111 aa	Predicted RBP	4.62	□□□□□ -1.67
RAD3	YER171W	UPS3	Q04006	179 aa		4.62	□□□□□ -1.67
RAD3	YER171W	RPL31A	P0C2H8	113 aa	Known RBP	4.62	□□□□□ -1.67
RAD3	YER171W	HAP3	P13434	144 aa		4.62	□□□□□ -1.67
RAD3	YER171W	PET8	P38921	284 aa		4.62	□□□□□ -1.67
RAD3	YER171W	YGR025W	P53216	100 aa		4.62	□□□□□ -1.67
RAD3	YER171W	YIL014C-A	Q02598	104 aa		4.62	□□□□□ -1.67
RAD3	YER171W	YMR317W	Q04893	1140 aa		4.62	□□□□□ -1.67
RAD3	YER171W	IZH3	Q07959	543 aa		4.62	□□□□□ -1.67
RAD3	YER171W	PAU23	Q07987	124 aa		4.62	□□□□□ -1.67
RAD3	YER171W	UTP23	Q12339	254 aa	Known RBP	4.62	□□□□□ -1.67
RAD3	YER171W	PAU17	Q12370	124 aa		4.62	□□□□□ -1.67
RAD3	YER171W	YER175W-A	Q8TGU4	54 aa		4.62	□□□□□ -1.67
RAD3	YER171W	RPL12A	P0CX53	165 aa	Known RBP	4.61	□□□□□ -1.67
RAD3	YER171W	RPL12B	P0CX54	165 aa		4.61	□□□□□ -1.67
RAD3	YER171W	YCR007C	P25354	239 aa		4.61	□□□□□ -1.67
RAD3	YER171W	YKR032W	P36127	104 aa		4.61	□□□□□ -1.67
RAD3	YER171W	YFR057W	P43625	151 aa		4.61	□□□□□ -1.67
RAD3	YER171W	UTR5	P32630	166 aa		4.61	□□□□□ -1.67
RAD3	YER171W	MST27	P53176	234 aa		4.61	□□□□□ -1.67
RAD3	YER171W	CAB4	P53332	305 aa		4.61	□□□□□ -1.67
RAD3	YER171W	GPI19	Q04082	140 aa		4.61	□□□□□ -1.67
RAD3	YER171W	TIM22	Q12328	207 aa		4.61	□□□□□ -1.67
RAD3	YER171W	YHR140W	P38842	239 aa		4.6	□□□□□ -1.67
RAD3	YER171W	SNF11	P38956	169 aa		4.6	□□□□□ -1.67
RAD3	YER171W	GRH1	Q04410	372 aa	Known RBP	4.6	□□□□□ -1.67
RAD3	YER171W	HTL1	Q9URQ5	78 aa		4.6	□□□□□ -1.67
RAD3	YER171W	RPL32	P38061	130 aa	Known RBP	4.6	□□□□□ -1.67
RAD3	YER171W	COX16	P47081	118 aa		4.6	□□□□□ -1.67
RAD3	YER171W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
RAD3	YER171W	Q0297	Q9ZZV8	51 aa		4.6	□□□□□ -1.67
RAD3	YER171W	FYV4	P38783	130 aa	Predicted RBP	4.59	□□□□□ -1.67
RAD3	YER171W	YLR050C	Q12155	161 aa	Known RBP	4.59	□□□□□ -1.67
RAD3	YER171W	VPS71	Q03433	280 aa		4.58	□□□□□ -1.68
RAD3	YER171W	ATG39	Q06159	398 aa		4.58	□□□□□ -1.68
RAD3	YER171W	INO2	P26798	304 aa		4.57	□□□□□ -1.68
RAD3	YER171W	SPI1	P40092	148 aa		4.57	□□□□□ -1.68
RAD3	YER171W	YER188W	P40103	239 aa		4.57	□□□□□ -1.68
RAD3	YER171W	YDR042C	Q03205	200 aa		4.57	□□□□□ -1.68
RAD3	YER171W	BET5	Q03630	159 aa		4.57	□□□□□ -1.68
RAD3	YER171W	YPR013C	Q12145	317 aa		4.57	□□□□□ -1.68
RAD3	YER171W	PRE1	P22141	198 aa	Known RBP	4.57	□□□□□ -1.68
RAD3	YER171W	YCR023C	P25351	611 aa		4.57	□□□□□ -1.68
RAD3	YER171W	YKR070W	P36151	352 aa	Known RBP	4.57	□□□□□ -1.68
RAD3	YER171W	TOS8	P53147	276 aa		4.57	□□□□□ -1.68
RAD3	YER171W	TVP18	Q04767	167 aa		4.57	□□□□□ -1.68
RAD3	YER171W	YBR121C-A	P0C5L4	52 aa		4.56	□□□□□ -1.68
RAD3	YER171W	TOA2	P32774	122 aa		4.56	□□□□□ -1.68
RAD3	YER171W	ELF1	P36053	145 aa		4.56	□□□□□ -1.68
RAD3	YER171W	MST28	P39552	234 aa		4.56	□□□□□ -1.68
RAD3	YER171W	ATP23	P53722	227 aa		4.56	□□□□□ -1.68
RAD3	YER171W	APS1	P35181	156 aa		4.56	□□□□□ -1.68
RAD3	YER171W	MRPL49	P40858	161 aa	Predicted RBP	4.56	□□□□□ -1.68
RAD3	YER171W	VPS55	P47111	140 aa		4.56	□□□□□ -1.68
RAD3	YER171W	CWC27	Q02770	301 aa		4.56	□□□□□ -1.68
RAD3	YER171W	YOL085C	Q99345	113 aa		4.56	□□□□□ -1.68
RAD3	YER171W	MGR2	Q02889	113 aa		4.55	□□□□□ -1.68
RAD3	YER171W	SRL1	Q08673	210 aa		4.55	□□□□□ -1.68
RAD3	YER171W	PRM7	Q12459	698 aa		4.55	□□□□□ -1.68
RAD3	YER171W	SAL1	D6W196	494 aa		4.55	□□□□□ -1.68
RAD3	YER171W	AGA1	P32323	725 aa		4.55	□□□□□ -1.68
RAD3	YER171W	YER076C	P40049	302 aa		4.55	□□□□□ -1.68
RAD3	YER171W	CAX4	P53223	239 aa		4.55	□□□□□ -1.68
RAD3	YER171W	YMR103C	Q04436	120 aa		4.55	□□□□□ -1.68
RAD3	YER171W	SPG4	Q04438	115 aa		4.55	□□□□□ -1.68
RAD3	YER171W	YOR011W-A	Q3E807	68 aa		4.55	□□□□□ -1.68
RAD3	YER171W	PFY1	P07274	126 aa		4.54	□□□□□ -1.68
RAD3	YER171W	AQY1	P0CD91	305 aa		4.54	□□□□□ -1.68
RAD3	YER171W	KTI12	P34253	313 aa	Known RBP	4.54	□□□□□ -1.68
RAD3	YER171W	HOR7	Q05827	59 aa		4.54	□□□□□ -1.68
RAD3	YER171W	DGA1	Q08650	418 aa		4.54	□□□□□ -1.68
RAD3	YER171W	YHR022C	P38763	256 aa		4.54	□□□□□ -1.68
RAD3	YER171W	YDR366C	P87287	132 aa		4.54	□□□□□ -1.68
RAD3	YER171W	FCF1	Q05498	189 aa	Predicted RBP	4.54	□□□□□ -1.68
RAD3	YER171W	RPL43A	P0CX25	92 aa	Known RBP	4.53	□□□□□ -1.68
RAD3	YER171W	RPL43B	P0CX26	92 aa		4.53	□□□□□ -1.68
RAD3	YER171W	MIC26	P50087	233 aa		4.53	□□□□□ -1.68
RAD3	YER171W	YLR363W-A	Q3E747	85 aa		4.53	□□□□□ -1.68
RAD3	YER171W	YPR170W-B	P0C5R9	85 aa		4.52	□□□□□ -1.69
RAD3	YER171W	CCW12	Q12127	133 aa		4.52	□□□□□ -1.69
RAD3	YER171W	YNL146C-A	Q3E7Z1	64 aa		4.52	□□□□□ -1.69
RAD3	YER171W	YKL044W	P36092	106 aa		4.52	□□□□□ -1.69
RAD3	YER171W	KEG1	P43614	200 aa		4.52	□□□□□ -1.69
RAD3	YER171W	YLR112W	Q12130	139 aa		4.52	□□□□□ -1.69
RAD3	YER171W	MBF1	O14467	151 aa	Known RBP	4.51	□□□□□ -1.69
RAD3	YER171W	HMRA2	P0CY13	119 aa		4.51	□□□□□ -1.69
RAD3	YER171W	YCR041W	P37265	110 aa		4.51	□□□□□ -1.69
RAD3	YER171W	RPF1	P38805	295 aa	Known RBP	4.51	□□□□□ -1.69
RAD3	YER171W	YER135C	P40082	130 aa		4.51	□□□□□ -1.69
RAD3	YER171W	YCH1	P42937	148 aa		4.51	□□□□□ -1.69
RAD3	YER171W	DFM1	Q12743	341 aa	Known RBP	4.51	□□□□□ -1.69
RAD3	YER171W	YBR200W-A	Q3E755	54 aa		4.51	□□□□□ -1.69
RAD3	YER171W	MRP49	P32388	137 aa		4.51	□□□□□ -1.69
RAD3	YER171W	TOS6	P48560	102 aa		4.51	□□□□□ -1.69
RAD3	YER171W	YPR053C	Q6Q5F3	151 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms