RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	RPL12A	P0CX53	165 aa	Known RBP	4.9	□□□□□ -1.63
VMA3	YEL027W	RPL12B	P0CX54	165 aa		4.9	□□□□□ -1.63
VMA3	YEL027W	MRPL31	P14063	131 aa	Predicted RBP	4.9	□□□□□ -1.63
VMA3	YEL027W	PRE1	P22141	198 aa	Known RBP	4.9	□□□□□ -1.63
VMA3	YEL027W	DAD2	P36162	133 aa		4.9	□□□□□ -1.63
VMA3	YEL027W	MIG3	P39943	394 aa		4.9	□□□□□ -1.63
VMA3	YEL027W	COX16	P47081	118 aa		4.9	□□□□□ -1.63
VMA3	YEL027W	MRPS8	Q03799	155 aa		4.9	□□□□□ -1.63
VMA3	YEL027W	CUP2	P15315	225 aa		4.89	□□□□□ -1.63
VMA3	YEL027W	AUA1	P32450	94 aa		4.89	□□□□□ -1.63
VMA3	YEL027W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
VMA3	YEL027W	MIX23	P38162	196 aa		4.89	□□□□□ -1.63
VMA3	YEL027W	YDR366C	P87287	132 aa		4.89	□□□□□ -1.63
VMA3	YEL027W	PAU23	Q07987	124 aa		4.89	□□□□□ -1.63
VMA3	YEL027W	YDR215C	Q12240	137 aa		4.89	□□□□□ -1.63
VMA3	YEL027W	TPT1	Q12272	230 aa	Known RBP	4.89	□□□□□ -1.63
VMA3	YEL027W	PAU17	Q12370	124 aa		4.89	□□□□□ -1.63
VMA3	YEL027W	ADH2	P00331	348 aa	Known RBP	4.88	□□□□□ -1.63
VMA3	YEL027W	AIM29	P36154	155 aa		4.88	□□□□□ -1.63
VMA3	YEL027W	CSM4	Q08955	156 aa		4.88	□□□□□ -1.63
VMA3	YEL027W	TIM22	Q12328	207 aa		4.88	□□□□□ -1.63
VMA3	YEL027W	YPR170W-B	P0C5R9	85 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	PAU16	P35994	123 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	PAM17	P36147	197 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	POP7	P38291	140 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	RPB11	P38902	120 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	YER134C	P40081	178 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	YJL028W	P47062	111 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	DIA1	P54005	336 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	ATG33	Q06485	197 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	YDL157C	Q12082	118 aa		4.87	□□□□□ -1.63
VMA3	YEL027W	MDN1	Q12019	4910 aa	Known RBP	4.87	□□□□□ -1.63
VMA3	YEL027W	VAR1	P02381	398 aa		4.86	□□□□□ -1.63
VMA3	YEL027W	PAU7	P39545	55 aa		4.86	□□□□□ -1.63
VMA3	YEL027W	KEG1	P43614	200 aa		4.86	□□□□□ -1.63
VMA3	YEL027W	SCW10	Q04951	389 aa		4.86	□□□□□ -1.63
VMA3	YEL027W	YOL085C	Q99345	113 aa		4.86	□□□□□ -1.63
VMA3	YEL027W	THG1	P53215	237 aa	Known RBP	4.85	□□□□□ -1.63
VMA3	YEL027W	COX12	Q01519	83 aa		4.85	□□□□□ -1.63
VMA3	YEL027W	YCR024C-B	Q3E7Z8	88 aa		4.85	□□□□□ -1.63
VMA3	YEL027W	CYC7	P00045	113 aa		4.84	□□□□□ -1.63
VMA3	YEL027W	RPL27A	P0C2H6	136 aa	Known RBP	4.84	□□□□□ -1.63
VMA3	YEL027W	RPL2A	P0CX45	254 aa	Known RBP	4.84	□□□□□ -1.63
VMA3	YEL027W	RPL2B	P0CX46	254 aa	Known RBP	4.84	□□□□□ -1.63
VMA3	YEL027W	RPS11A	P0CX47	156 aa	Known RBP	4.84	□□□□□ -1.63
VMA3	YEL027W	RPS11B	P0CX48	156 aa	Known RBP	4.84	□□□□□ -1.63
VMA3	YEL027W	AGA1	P32323	725 aa		4.84	□□□□□ -1.63
VMA3	YEL027W	YHR140W	P38842	239 aa		4.84	□□□□□ -1.63
VMA3	YEL027W	CIN5	P40917	295 aa		4.84	□□□□□ -1.63
VMA3	YEL027W	ARC18	Q05933	178 aa	Known RBP	4.84	□□□□□ -1.63
VMA3	YEL027W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.84	□□□□□ -1.63
VMA3	YEL027W	Q0255	P03881	472 aa		4.83	□□□□□ -1.64
VMA3	YEL027W	YCR007C	P25354	239 aa		4.83	□□□□□ -1.64
VMA3	YEL027W	MLF3	P32047	452 aa		4.83	□□□□□ -1.64
VMA3	YEL027W	RPF1	P38805	295 aa	Known RBP	4.83	□□□□□ -1.64
VMA3	YEL027W	TEM1	P38987	245 aa		4.83	□□□□□ -1.64
VMA3	YEL027W	SDS23	P53172	527 aa		4.83	□□□□□ -1.64
VMA3	YEL027W	YBR200W-A	Q3E755	54 aa		4.83	□□□□□ -1.64
VMA3	YEL027W	MBF1	O14467	151 aa	Known RBP	4.82	□□□□□ -1.64
VMA3	YEL027W	RPL23A	P0CX41	137 aa	Known RBP	4.82	□□□□□ -1.64
VMA3	YEL027W	RPL23B	P0CX42	137 aa	Known RBP	4.82	□□□□□ -1.64
VMA3	YEL027W	ZRT1	P32804	376 aa		4.82	□□□□□ -1.64
VMA3	YEL027W	YFR035C	P43608	114 aa		4.82	□□□□□ -1.64
VMA3	YEL027W	BRP1	P53194	125 aa		4.82	□□□□□ -1.64
VMA3	YEL027W	YGR017W	P53210	297 aa		4.82	□□□□□ -1.64
VMA3	YEL027W	GPI19	Q04082	140 aa		4.82	□□□□□ -1.64
VMA3	YEL027W	GTO3	Q04806	366 aa		4.82	□□□□□ -1.64
VMA3	YEL027W	CNL1	Q06333	122 aa		4.82	□□□□□ -1.64
VMA3	YEL027W	SAL1	D6W196	494 aa		4.81	□□□□□ -1.64
VMA3	YEL027W	GSP1	P32835	219 aa	Known RBP	4.81	□□□□□ -1.64
VMA3	YEL027W	GSP2	P32836	220 aa	Known RBP	4.81	□□□□□ -1.64
VMA3	YEL027W	NRG2	P38082	220 aa		4.81	□□□□□ -1.64
VMA3	YEL027W	VHS2	P40463	436 aa		4.81	□□□□□ -1.64
VMA3	YEL027W	HAC1	P41546	238 aa		4.81	□□□□□ -1.64
VMA3	YEL027W	YGL230C	P53074	147 aa		4.81	□□□□□ -1.64
VMA3	YEL027W	FSF1	Q12029	327 aa	Known RBP	4.81	□□□□□ -1.64
VMA3	YEL027W	CPR1	P14832	162 aa	Known RBP	4.8	□□□□□ -1.64
VMA3	YEL027W	SEC11	P15367	167 aa		4.8	□□□□□ -1.64
VMA3	YEL027W	RPL16B	P26785	198 aa	Known RBP	4.8	□□□□□ -1.64
VMA3	YEL027W	YCH1	P42937	148 aa		4.8	□□□□□ -1.64
VMA3	YEL027W	YPL257W	Q08974	193 aa		4.8	□□□□□ -1.64
VMA3	YEL027W	WIP1	Q2V2P8	89 aa		4.8	□□□□□ -1.64
VMA3	YEL027W	YPR053C	Q6Q5F3	151 aa		4.8	□□□□□ -1.64
VMA3	YEL027W	SEC4	P07560	215 aa	Known RBP	4.79	□□□□□ -1.64
VMA3	YEL027W	RRT13	P40042	185 aa		4.79	□□□□□ -1.64
VMA3	YEL027W	MSL1	P40567	111 aa	Predicted RBP	4.79	□□□□□ -1.64
VMA3	YEL027W	AIM34	Q03673	198 aa		4.79	□□□□□ -1.64
VMA3	YEL027W	YCR075W-A	Q3E830	75 aa		4.79	□□□□□ -1.64
VMA3	YEL027W	SCS22	Q6Q595	175 aa		4.79	□□□□□ -1.64
VMA3	YEL027W	YBR126W-A	Q8TGU7	68 aa		4.79	□□□□□ -1.64
VMA3	YEL027W	MRP49	P32388	137 aa		4.78	□□□□□ -1.64
VMA3	YEL027W	VAM10	Q08474	114 aa		4.78	□□□□□ -1.64
VMA3	YEL027W	FYV4	P38783	130 aa	Predicted RBP	4.77	□□□□□ -1.65
VMA3	YEL027W	YGL118C	P53132	145 aa		4.77	□□□□□ -1.65
VMA3	YEL027W	RDS3	Q06835	107 aa	Predicted RBP	4.77	□□□□□ -1.65
VMA3	YEL027W	RPL42A	P0CX27	106 aa	Known RBP	4.76	□□□□□ -1.65
VMA3	YEL027W	RPL42B	P0CX28	106 aa	Known RBP	4.76	□□□□□ -1.65
VMA3	YEL027W	YCR001W	P25347	104 aa		4.76	□□□□□ -1.65
VMA3	YEL027W	ARO2	P28777	376 aa	Known RBP	4.76	□□□□□ -1.65
VMA3	YEL027W	KTI12	P34253	313 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 108.8 ms