RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS52	YDR484W	RPS20	P38701	121 aa	Known RBP	0.22	□□□□□ -2.37
VPS52	YDR484W	SNF11	P38956	169 aa		0.22	□□□□□ -2.37
VPS52	YDR484W	YGR017W	P53210	297 aa		0.22	□□□□□ -2.37
VPS52	YDR484W	GPI19	Q04082	140 aa		0.22	□□□□□ -2.37
VPS52	YDR484W	YLR285C-A	Q3E771	56 aa		0.22	□□□□□ -2.37
VPS52	YDR484W	YNL277W-A	Q3E7Z0	62 aa		0.22	□□□□□ -2.37
VPS52	YDR484W	ENV10	Q99382	181 aa		0.22	□□□□□ -2.37
VPS52	YDR484W	RPL36B	O14455	100 aa	Known RBP	0.21	□□□□□ -2.38
VPS52	YDR484W	RPL36A	P05745	100 aa	Predicted RBP	0.21	□□□□□ -2.38
VPS52	YDR484W	SEC59	P20048	519 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	MRP49	P32388	137 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	PAU24	P38155	120 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	YFR035C	P43608	114 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	SAE3	P89114	91 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	DYN2	Q02647	92 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	CNL1	Q06333	122 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	RAD50	P12753	1312 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	TRM732	Q03496	1420 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	BRR2	P32639	2163 aa	Known RBP	0.21	□□□□□ -2.38
VPS52	YDR484W	PAU2	P32612	120 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	CYB5	P40312	120 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	HPA2	Q06592	156 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	YLR099W-A	Q3E798	87 aa		0.21	□□□□□ -2.38
VPS52	YDR484W	SEC7	P11075	2009 aa	Known RBP	0.2	□□□□□ -2.38
VPS52	YDR484W	DNA2	P38859	1522 aa		0.2	□□□□□ -2.38
VPS52	YDR484W	COX23	P38824	151 aa		0.2	□□□□□ -2.38
VPS52	YDR484W	YGL204C	P53089	101 aa		0.2	□□□□□ -2.38
VPS52	YDR484W	YGR042W	P53227	271 aa		0.2	□□□□□ -2.38
VPS52	YDR484W	MRPS12	P53732	153 aa		0.2	□□□□□ -2.38
VPS52	YDR484W	SPC24	Q04477	213 aa		0.2	□□□□□ -2.38
VPS52	YDR484W	HMRA2	P0CY13	119 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	YAR029W	P39549	74 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	MPC1	P53157	130 aa	Known RBP	0.19	□□□□□ -2.38
VPS52	YDR484W	PCC1	Q3E833	88 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	TAO3	P40468	2376 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	YLR255C	O13574	117 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	RPL22A	P05749	121 aa	Known RBP	0.19	□□□□□ -2.38
VPS52	YDR484W	ARL3	Q02804	198 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	SPC2	Q04969	178 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	YLR042C	Q07990	161 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	Q0144	Q9ZZW2	109 aa		0.19	□□□□□ -2.38
VPS52	YDR484W	POP7	P38291	140 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	YEA6	P39953	335 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	TDA2	P40045	126 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	PAM16	P42949	149 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	YDR278C	Q05612	105 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	YOR097C	Q12274	175 aa	Predicted RBP	0.18	□□□□□ -2.38
VPS52	YDR484W	YLR118C	Q12354	227 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	WIP1	Q2V2P8	89 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	YGR240C-A	Q3E786	66 aa		0.18	□□□□□ -2.38
VPS52	YDR484W	ICS3	P47034	131 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	YJL197C-A	P0C5P0	93 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	RPA12	P32529	125 aa	Known RBP	0.17	□□□□□ -2.38
VPS52	YDR484W	YER187W	P40102	141 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	YIR020C	P40575	100 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	VPS55	P47111	140 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	NKP2	Q06162	153 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	YPL261C	Q08976	102 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	OCA6	Q12454	224 aa		0.17	□□□□□ -2.38
VPS52	YDR484W	MYO2	P19524	1574 aa	Known RBP	0.16	□□□□□ -2.38
VPS52	YDR484W	PAU19	P0CE85	124 aa		0.16	□□□□□ -2.38
VPS52	YDR484W	PAU3	P25610	124 aa		0.16	□□□□□ -2.38
VPS52	YDR484W	RPB11	P38902	120 aa		0.16	□□□□□ -2.38
VPS52	YDR484W	SLO1	Q3E784	85 aa		0.16	□□□□□ -2.38
VPS52	YDR484W	OST5	Q92316	86 aa		0.16	□□□□□ -2.38
VPS52	YDR484W	FAS2	P19097	1887 aa	Known RBP	0.16	□□□□□ -2.38
VPS52	YDR484W	BUD23	P25627	275 aa	Predicted RBP	0.15	□□□□□ -2.39
VPS52	YDR484W	LHP1	P33399	275 aa	Known RBP	0.15	□□□□□ -2.39
VPS52	YDR484W	YOL164W-A	Q3E7A5	60 aa		0.15	□□□□□ -2.39
VPS52	YDR484W	POL2	P21951	2222 aa	Known RBP	0.15	□□□□□ -2.39
VPS52	YDR484W	MYO1	P08964	1928 aa		0.15	□□□□□ -2.39
VPS52	YDR484W	YRF1-6	P53819	1859 aa		0.15	□□□□□ -2.39
VPS52	YDR484W	SNN1	P48232	102 aa		0.15	□□□□□ -2.39
VPS52	YDR484W	YDR010C	Q12426	110 aa		0.15	□□□□□ -2.39
VPS52	YDR484W	YGL041C-B	Q3E750	60 aa		0.15	□□□□□ -2.39
VPS52	YDR484W	VMA7	P39111	118 aa		0.14	□□□□□ -2.39
VPS52	YDR484W	RPL22B	P56628	122 aa	Known RBP	0.14	□□□□□ -2.39
VPS52	YDR484W	PAU16	P35994	123 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	GCV3	P39726	170 aa	Predicted RBP	0.13	□□□□□ -2.39
VPS52	YDR484W	PAU15	P40585	124 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	AIM11	P87275	137 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	FRQ1	Q06389	190 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	DAD1	Q12248	94 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	ECM5	Q03214	1411 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	TY4B-H	P0C2J7	1802 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	YER039C-A	P0CD97	72 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	YHR173C	P38864	112 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	LSM6	Q06406	86 aa	Known RBP	0.13	□□□□□ -2.39
VPS52	YDR484W	YLR363W-A	Q3E747	85 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	YLR365W	Q7LIF2	110 aa		0.13	□□□□□ -2.39
VPS52	YDR484W	YCR099C	P25657	155 aa		0.12	□□□□□ -2.39
VPS52	YDR484W	RPO41	P13433	1351 aa	Known RBP	0.12	□□□□□ -2.39
VPS52	YDR484W	RUB1	Q03919	77 aa		0.11	□□□□□ -2.39
VPS52	YDR484W	YIR021W-A	Q3E739	70 aa		0.11	□□□□□ -2.39
VPS52	YDR484W	YDR210W	Q03482	75 aa		0.11	□□□□□ -2.39
VPS52	YDR484W	RTR2	Q12378	196 aa		0.11	□□□□□ -2.39
VPS52	YDR484W	ROX3	P25046	220 aa		0.1	□□□□□ -2.39
VPS52	YDR484W	SHU1	P38751	150 aa		0.1	□□□□□ -2.39
VPS52	YDR484W	PAU5	P43575	122 aa		0.1	□□□□□ -2.39
VPS52	YDR484W	APS2	Q00381	147 aa		0.1	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms