RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W ATP23P53722 227 aa8.06□□□□□ -1.12
SNF1YDR477W RPB10P22139 70 aa8.05□□□□□ -1.12
SNF1YDR477W YNR077CP53758 84 aa8.05□□□□□ -1.12
SNF1YDR477W YFR057WP43625 151 aa8.05□□□□□ -1.12
SNF1YDR477W OST2P46964 130 aa8.05□□□□□ -1.12
SNF1YDR477W PFY1P07274 126 aa8.04□□□□□ -1.12
SNF1YDR477W HMRA2P0CY13 119 aa8.04□□□□□ -1.12
SNF1YDR477W DUT1P33317 147 aa8.04□□□□□ -1.12
SNF1YDR477W YKL070WP36087 169 aa8.04□□□□□ -1.12
SNF1YDR477W OXA1P39952 402 aa8.04□□□□□ -1.12
SNF1YDR477W YPL261CQ08976 102 aa8.04□□□□□ -1.12
SNF1YDR477W VAR1P02381 398 aa8.03□□□□□ -1.12
SNF1YDR477W HEM13P11353 328 aaKnown RBP8.03□□□□□ -1.12
SNF1YDR477W DAL80P26343 269 aa8.03□□□□□ -1.12
SNF1YDR477W NHP2P32495 156 aaPredicted RBP8.03□□□□□ -1.12
SNF1YDR477W ATX1P38636 73 aa8.03□□□□□ -1.12
SNF1YDR477W YIP1P53039 248 aa8.03□□□□□ -1.12
SNF1YDR477W SED1Q01589 338 aa8.03□□□□□ -1.12
SNF1YDR477W TIM22Q12328 207 aa8.03□□□□□ -1.12
SNF1YDR477W COA3Q3E7B2 85 aa8.03□□□□□ -1.12
SNF1YDR477W INO4P13902 151 aa8.03□□□□□ -1.12
SNF1YDR477W WSC3Q12215 556 aa8.03□□□□□ -1.12
SNF1YDR477W ISD11Q6Q560 94 aa8.03□□□□□ -1.12
SNF1YDR477W TRA1P38811 3744 aa8.02□□□□□ -1.13
SNF1YDR477W YOR097CQ12274 175 aaPredicted RBP8.02□□□□□ -1.13
SNF1YDR477W YCR075W-AQ3E830 75 aa8.01□□□□□ -1.13
SNF1YDR477W AGA1P32323 725 aa8.01□□□□□ -1.13
SNF1YDR477W RPL32P38061 130 aaKnown RBP8.01□□□□□ -1.13
SNF1YDR477W JID1Q12350 301 aa8.01□□□□□ -1.13
SNF1YDR477W VTC1P40046 129 aaRIP-Chip data8□□□□□ -1.13not detected
SNF1YDR477W FCY1Q12178 158 aa8□□□□□ -1.13
SNF1YDR477W YDL009CQ12210 107 aa8□□□□□ -1.13
SNF1YDR477W YFL065CP43539 102 aa7.99□□□□□ -1.13
SNF1YDR477W TOS6P48560 102 aa7.99□□□□□ -1.13
SNF1YDR477W NUP42P49686 430 aaKnown RBP7.99□□□□□ -1.13
SNF1YDR477W YPR203WQ08994 102 aa7.99□□□□□ -1.13
SNF1YDR477W YAR1P46683 200 aa7.99□□□□□ -1.13
SNF1YDR477W YNL092WP53934 400 aa7.99□□□□□ -1.13
SNF1YDR477W UBC7Q02159 165 aa7.99□□□□□ -1.13
SNF1YDR477W YOL160WQ08321 113 aa7.99□□□□□ -1.13
SNF1YDR477W KTI12P34253 313 aaKnown RBP7.97□□□□□ -1.13
SNF1YDR477W MRPL38P35996 138 aaPredicted RBP7.97□□□□□ -1.13
SNF1YDR477W YHL037CP38733 133 aa7.97□□□□□ -1.13
SNF1YDR477W WWM1P43582 211 aaKnown RBP7.97□□□□□ -1.13
SNF1YDR477W PBP4Q07362 185 aaKnown RBP7.97□□□□□ -1.13
SNF1YDR477W SPI1P40092 148 aa7.96□□□□□ -1.13
SNF1YDR477W YNL046WP53956 172 aa7.96□□□□□ -1.13
SNF1YDR477W HPA2Q06592 156 aa7.96□□□□□ -1.13
SNF1YDR477W COX10P21592 462 aa7.95□□□□□ -1.14
SNF1YDR477W MOH1P38191 138 aa7.95□□□□□ -1.14
SNF1YDR477W SGN1P40561 250 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
SNF1YDR477W LCB3P47013 409 aa7.95□□□□□ -1.14
SNF1YDR477W YGR025WP53216 100 aa7.95□□□□□ -1.14
SNF1YDR477W YMR181CQ03231 154 aa7.95□□□□□ -1.14
SNF1YDR477W LSM6Q06406 86 aaKnown RBP7.95□□□□□ -1.14
SNF1YDR477W YGR045CP53229 120 aa7.95□□□□□ -1.14
SNF1YDR477W VHS2P40463 436 aa7.94□□□□□ -1.14
SNF1YDR477W AIM34Q03673 198 aa7.94□□□□□ -1.14
SNF1YDR477W MET32Q12041 191 aa7.94□□□□□ -1.14
SNF1YDR477W YCL048W-AQ2V2Q2 79 aa7.94□□□□□ -1.14
SNF1YDR477W LDB16P25587 256 aa7.93□□□□□ -1.14
SNF1YDR477W YNL217WP40152 326 aa7.93□□□□□ -1.14
SNF1YDR477W GLO1P50107 326 aa7.93□□□□□ -1.14
SNF1YDR477W AIM11P87275 137 aa7.93□□□□□ -1.14
SNF1YDR477W SNA4Q07549 140 aa7.93□□□□□ -1.14
SNF1YDR477W IGO2Q9P305 131 aa7.93□□□□□ -1.14
SNF1YDR477W BPH1P25356 2167 aa7.93□□□□□ -1.14
SNF1YDR477W RPA12P32529 125 aaKnown RBP7.92□□□□□ -1.14
SNF1YDR477W YER121WP40076 114 aa7.92□□□□□ -1.14
SNF1YDR477W EOS1P53938 366 aa7.92□□□□□ -1.14
SNF1YDR477W YPL229WQ99395 206 aa7.92□□□□□ -1.14
SNF1YDR477W PHO85P17157 305 aa7.91□□□□□ -1.14
SNF1YDR477W PRM7Q12459 698 aa7.91□□□□□ -1.14
SNF1YDR477W YER085CP40058 173 aa7.91□□□□□ -1.14
SNF1YDR477W YPR053CQ6Q5F3 151 aa7.91□□□□□ -1.14
SNF1YDR477W RPS8AP0CX39 200 aaKnown RBP7.9□□□□□ -1.14
SNF1YDR477W RPS8BP0CX40 200 aaKnown RBP7.9□□□□□ -1.14
SNF1YDR477W IES6P32617 166 aa7.9□□□□□ -1.14
SNF1YDR477W MRPL49P40858 161 aaPredicted RBP7.9□□□□□ -1.14
SNF1YDR477W POR2P40478 281 aa7.89□□□□□ -1.15
SNF1YDR477W DUO1P53168 247 aaKnown RBP7.89□□□□□ -1.15
SNF1YDR477W YLR194CQ05777 254 aa7.89□□□□□ -1.15
SNF1YDR477W YOR008C-AQ3E7B9 74 aa7.89□□□□□ -1.15
SNF1YDR477W ATP15P21306 62 aa7.88□□□□□ -1.15
SNF1YDR477W YKL069WP36088 180 aa7.88□□□□□ -1.15
SNF1YDR477W ERF2Q06551 359 aa7.88□□□□□ -1.15
SNF1YDR477W MRPL23Q12487 163 aaPredicted RBP7.88□□□□□ -1.15
SNF1YDR477W YOL085CQ99345 113 aa7.88□□□□□ -1.15
SNF1YDR477W YOR304C-AO14468 76 aa7.88□□□□□ -1.15
SNF1YDR477W MID2P36027 376 aa7.88□□□□□ -1.15
SNF1YDR477W YPL080CQ02826 108 aa7.88□□□□□ -1.15
SNF1YDR477W YHR130CP38834 111 aa7.86□□□□□ -1.15
SNF1YDR477W YGR219WP53307 113 aa7.86□□□□□ -1.15
SNF1YDR477W URM1P40554 99 aaPredicted RBP7.86□□□□□ -1.15
SNF1YDR477W YIP3P53633 176 aa7.86□□□□□ -1.15
SNF1YDR477W RPL42AP0CX27 106 aaKnown RBP7.85□□□□□ -1.15
SNF1YDR477W RPL42BP0CX28 106 aaKnown RBP7.85□□□□□ -1.15
SNF1YDR477W RRG8Q06109 277 aa7.85□□□□□ -1.15
SNF1YDR477W FIP1P45976 327 aa7.84□□□□□ -1.15
SNF1YDR477W YNL190WP53872 204 aa7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms