RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	NSL1	Q12143	216 aa		2.62	□□□□□ -1.99
RPB7	YDR404C	BOL1	Q3E793	110 aa		2.62	□□□□□ -1.99
RPB7	YDR404C	MHF2	Q3E829	80 aa		2.62	□□□□□ -1.99
RPB7	YDR404C	RIB3	Q99258	208 aa		2.62	□□□□□ -1.99
RPB7	YDR404C	TTI2	P47168	421 aa		2.61	□□□□□ -1.99
RPB7	YDR404C	KNH1	P50112	268 aa		2.61	□□□□□ -1.99
RPB7	YDR404C	ERV14	P53173	138 aa		2.61	□□□□□ -1.99
RPB7	YDR404C	SAY1	P53324	424 aa		2.61	□□□□□ -1.99
RPB7	YDR404C	POP3	P53833	195 aa	Predicted RBP	2.61	□□□□□ -1.99
RPB7	YDR404C	SHH3	Q04487	196 aa		2.61	□□□□□ -1.99
RPB7	YDR404C	IRC23	Q08416	157 aa		2.61	□□□□□ -1.99
RPB7	YDR404C	RAD28	Q12021	506 aa		2.61	□□□□□ -1.99
RPB7	YDR404C	RPS28B	P0C0X0	67 aa	Known RBP	2.6	□□□□□ -1.99
RPB7	YDR404C	NHP6A	P11632	93 aa	Known RBP	2.6	□□□□□ -1.99
RPB7	YDR404C	MRPL44	P19956	98 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	TMA19	P35691	167 aa	Known RBP	2.6	□□□□□ -1.99
RPB7	YDR404C	CSH1	P38287	376 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	IPT1	P38954	527 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	SPC25	P40014	221 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	YGL101W	P53144	215 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	YGR017W	P53210	297 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	HHO1	P53551	258 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	YCL001W-A	P87012	153 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	SAE3	P89114	91 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	CUE4	Q04201	117 aa	Predicted RBP	2.6	□□□□□ -1.99
RPB7	YDR404C	WIP1	Q2V2P8	89 aa		2.6	□□□□□ -1.99
RPB7	YDR404C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.6	□□□□□ -1.99
RPB7	YDR404C	PRE1	P22141	198 aa	Known RBP	2.59	□□□□□ -1.99
RPB7	YDR404C	YCR023C	P25351	611 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	PAM17	P36147	197 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	RPS20	P38701	121 aa	Known RBP	2.59	□□□□□ -1.99
RPB7	YDR404C	YAE1	P47118	141 aa	Predicted RBP	2.59	□□□□□ -1.99
RPB7	YDR404C	SBH1	P52870	82 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	YNL033W	P53964	284 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	YNL019C	P53975	284 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	BUD25	P85052	153 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	YMR253C	Q04835	414 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	TAR1	Q8TGM6	124 aa		2.59	□□□□□ -1.99
RPB7	YDR404C	SEC11	P15367	167 aa		2.58	□□□□□ -2
RPB7	YDR404C	IDP1	P21954	428 aa	Known RBP	2.58	□□□□□ -2
RPB7	YDR404C	ROX3	P25046	220 aa		2.58	□□□□□ -2
RPB7	YDR404C	HYM1	P32464	399 aa		2.58	□□□□□ -2
RPB7	YDR404C	PDX3	P38075	228 aa	Known RBP	2.58	□□□□□ -2
RPB7	YDR404C	MPC2	P38857	129 aa		2.58	□□□□□ -2
RPB7	YDR404C	NSA2	P40078	261 aa	Known RBP	2.58	□□□□□ -2
RPB7	YDR404C	YNL200C	P40165	246 aa	Known RBP	2.58	□□□□□ -2
RPB7	YDR404C	YFR035C	P43608	114 aa		2.58	□□□□□ -2
RPB7	YDR404C	MAK3	Q03503	176 aa		2.58	□□□□□ -2
RPB7	YDR404C	THI74	Q04083	370 aa		2.58	□□□□□ -2
RPB7	YDR404C	GAL83	Q04739	417 aa		2.58	□□□□□ -2
RPB7	YDR404C	TVP18	Q04767	167 aa		2.58	□□□□□ -2
RPB7	YDR404C	ANT1	Q06497	328 aa		2.58	□□□□□ -2
RPB7	YDR404C	GPI11	Q06636	219 aa		2.58	□□□□□ -2
RPB7	YDR404C	HUT1	Q12520	339 aa		2.58	□□□□□ -2
RPB7	YDR404C	YOR304C-A	O14468	76 aa		2.57	□□□□□ -2
RPB7	YDR404C	YBR013C	P38215	129 aa		2.57	□□□□□ -2
RPB7	YDR404C	SNN1	P48232	102 aa		2.57	□□□□□ -2
RPB7	YDR404C	ELP6	Q04868	273 aa		2.57	□□□□□ -2
RPB7	YDR404C	SCP1	Q08873	200 aa		2.57	□□□□□ -2
RPB7	YDR404C	ATP20	Q12233	115 aa		2.57	□□□□□ -2
RPB7	YDR404C	PET20	Q99373	253 aa		2.57	□□□□□ -2
RPB7	YDR404C	YJL197C-A	P0C5P0	93 aa		2.56	□□□□□ -2
RPB7	YDR404C	SEC59	P20048	519 aa		2.56	□□□□□ -2
RPB7	YDR404C	SSS1	P35179	80 aa		2.56	□□□□□ -2
RPB7	YDR404C	YKR045C	P36138	183 aa		2.56	□□□□□ -2
RPB7	YDR404C	FYV4	P38783	130 aa	Predicted RBP	2.56	□□□□□ -2
RPB7	YDR404C	MOG1	P47123	218 aa		2.56	□□□□□ -2
RPB7	YDR404C	NQM1	P53228	333 aa	Predicted RBP	2.56	□□□□□ -2
RPB7	YDR404C	DYN2	Q02647	92 aa		2.56	□□□□□ -2
RPB7	YDR404C	FRQ1	Q06389	190 aa		2.56	□□□□□ -2
RPB7	YDR404C	SLM6	P38343	150 aa		2.55	□□□□□ -2
RPB7	YDR404C	YPT31	P38555	223 aa	Known RBP	2.55	□□□□□ -2
RPB7	YDR404C	NSE4	P43124	402 aa		2.55	□□□□□ -2
RPB7	YDR404C	HRD1	Q08109	551 aa		2.55	□□□□□ -2
RPB7	YDR404C	YOR192C-C	Q3E736	78 aa		2.55	□□□□□ -2
RPB7	YDR404C	YLR361C-A	Q3E795	98 aa		2.55	□□□□□ -2
RPB7	YDR404C	IPI1	P38803	334 aa	Predicted RBP	2.54	□□□□□ -2
RPB7	YDR404C	YPL073C	P40323	161 aa		2.54	□□□□□ -2
RPB7	YDR404C	SEN15	Q04675	128 aa		2.54	□□□□□ -2
RPB7	YDR404C	UPS1	Q05776	175 aa		2.54	□□□□□ -2
RPB7	YDR404C	YOL118C	Q08259	102 aa		2.54	□□□□□ -2
RPB7	YDR404C	ADK1	P07170	222 aa	Known RBP	2.53	□□□□□ -2
RPB7	YDR404C	UBI4	P0CG63	381 aa	Known RBP	2.53	□□□□□ -2
RPB7	YDR404C	FUN14	P18411	198 aa		2.53	□□□□□ -2
RPB7	YDR404C	RRT1	P38192	103 aa		2.53	□□□□□ -2
RPB7	YDR404C	YBR219C	P38317	127 aa		2.53	□□□□□ -2
RPB7	YDR404C	DLS1	P40366	167 aa		2.53	□□□□□ -2
RPB7	YDR404C	GLC8	P41818	229 aa		2.53	□□□□□ -2
RPB7	YDR404C	COX12	Q01519	83 aa		2.53	□□□□□ -2
RPB7	YDR404C	VPS28	Q02767	242 aa		2.53	□□□□□ -2
RPB7	YDR404C	YPR013C	Q12145	317 aa		2.53	□□□□□ -2
RPB7	YDR404C	YGL194C-A	Q2V2P6	80 aa		2.53	□□□□□ -2
RPB7	YDR404C	PCC1	Q3E833	88 aa		2.53	□□□□□ -2
RPB7	YDR404C	YOS1	Q3E834	85 aa		2.53	□□□□□ -2
RPB7	YDR404C	SPS2	P08459	502 aa		2.52	□□□□□ -2.01
RPB7	YDR404C	SRB6	P32570	121 aa		2.52	□□□□□ -2.01
RPB7	YDR404C	UPS2	P35200	230 aa		2.52	□□□□□ -2.01
RPB7	YDR404C	YIR021W-A	Q3E739	70 aa		2.52	□□□□□ -2.01
RPB7	YDR404C	SLO1	Q3E784	85 aa		2.52	□□□□□ -2.01
RPB7	YDR404C	MED11	Q99278	115 aa		2.52	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 89.9 ms