RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	MMS2	P53152	137 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	MPC3	P53311	146 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	GRX5	Q02784	150 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	GRX3	Q03835	250 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	HUG1	Q6Q5K6	68 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	YDR157W	A0A023PZE8	133 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	RTC6	O14464	93 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	SEN2	P16658	377 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	HYP2	P23301	157 aa	Known RBP	0.67	□□□□□ -2.3
SHE9	YDR393W	POR2	P40478	281 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	AIM25	P47140	327 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	YGL204C	P53089	101 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	DYN2	Q02647	92 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	LCL1	Q02786	101 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	YMR226C	Q05016	267 aa	Known RBP	0.67	□□□□□ -2.3
SHE9	YDR393W	ADF1	Q2V2Q1	113 aa		0.67	□□□□□ -2.3
SHE9	YDR393W	ARG80	P07249	177 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	YHR213W	P0CI67	198 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	PAN3	P36102	679 aa	Predicted RBP	0.66	□□□□□ -2.3
SHE9	YDR393W	RRT1	P38192	103 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	YHR138C	P38841	114 aa	Predicted RBP	0.66	□□□□□ -2.3
SHE9	YDR393W	SPC1	P46965	94 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	ARP3	P47117	449 aa	Known RBP	0.66	□□□□□ -2.3
SHE9	YDR393W	YGR017W	P53210	297 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	DAD4	P69851	72 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	EST3	Q03096	181 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	SPC2	Q04969	178 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	YPR108W-A	Q3E7B3	70 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	YCR075W-A	Q3E830	75 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	YLR365W	Q7LIF2	110 aa		0.66	□□□□□ -2.3
SHE9	YDR393W	YAR023C	D6VPM8	179 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	PET54	P10834	293 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	TIR1	P10863	254 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	SFK1	P35735	353 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	HPA3	P39979	161 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	NSA2	P40078	261 aa	Known RBP	0.65	□□□□□ -2.31
SHE9	YDR393W	UBC12	P52491	188 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	YGL149W	P53116	101 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	YGR042W	P53227	271 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	PAU12	P53343	120 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	YMR295C	Q03559	197 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	COA4	Q05809	96 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	YLR099W-A	Q3E798	87 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	CMC4	Q3E7A9	73 aa		0.65	□□□□□ -2.31
SHE9	YDR393W	COX9	P07255	59 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	RFA3	P26755	122 aa	Known RBP	0.64	□□□□□ -2.31
SHE9	YDR393W	TRR1	P29509	319 aa	Known RBP	0.64	□□□□□ -2.31
SHE9	YDR393W	PAU2	P32612	120 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	PAU24	P38155	120 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	YEA4	P40004	342 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	MSS2	P40990	351 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	DIE2	P50076	525 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	CWC23	P52868	283 aa	Predicted RBP	0.64	□□□□□ -2.31
SHE9	YDR393W	SNO1	Q03144	224 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	THI74	Q04083	370 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	HRD1	Q08109	551 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	KTI11	Q3E840	82 aa		0.64	□□□□□ -2.31
SHE9	YDR393W	RPL33A	P05744	107 aa	Known RBP	0.63	□□□□□ -2.31
SHE9	YDR393W	YGL041W-A	P0C5N3	154 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	SHB17	P36136	271 aa	Known RBP	0.63	□□□□□ -2.31
SHE9	YDR393W	YBL071C	P38185	102 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	YHL018W	P38744	120 aa	Predicted RBP	0.63	□□□□□ -2.31
SHE9	YDR393W	YER134C	P40081	178 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	TMA22	P47089	198 aa	Predicted RBP	0.63	□□□□□ -2.31
SHE9	YDR393W	UPS3	Q04006	179 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	SHH3	Q04487	196 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	YMR320W	Q04897	101 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	YGL258W-A	Q3E740	77 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	YGR240C-A	Q3E786	66 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	YKL068W-A	Q3E826	78 aa		0.63	□□□□□ -2.31
SHE9	YDR393W	COX8	P04039	78 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	CNB1	P25296	175 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	LSM2	P38203	95 aa	Known RBP	0.62	□□□□□ -2.31
SHE9	YDR393W	CSH1	P38287	376 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	YEL008W	P40001	126 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	PDS1	P40316	373 aa	Predicted RBP	0.62	□□□□□ -2.31
SHE9	YDR393W	SER2	P42941	309 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	TMA23	Q03525	211 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	YMR253C	Q04835	414 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	YDR029W	Q12111	104 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	CCW12	Q12127	133 aa		0.62	□□□□□ -2.31
SHE9	YDR393W	POC4	Q12245	148 aa	Predicted RBP	0.62	□□□□□ -2.31
SHE9	YDR393W	MBF1	O14467	151 aa	Known RBP	0.61	□□□□□ -2.31
SHE9	YDR393W	IDP1	P21954	428 aa	Known RBP	0.61	□□□□□ -2.31
SHE9	YDR393W	HTD2	P38790	280 aa	Known RBP	0.61	□□□□□ -2.31
SHE9	YDR393W	IMP2	P46972	177 aa		0.61	□□□□□ -2.31
SHE9	YDR393W	SNA2	P56508	79 aa		0.61	□□□□□ -2.31
SHE9	YDR393W	RAV2	Q03956	351 aa		0.61	□□□□□ -2.31
SHE9	YDR393W	YLR031W	Q07978	186 aa		0.61	□□□□□ -2.31
SHE9	YDR393W	YLR042C	Q07990	161 aa		0.61	□□□□□ -2.31
SHE9	YDR393W	FIT2	Q08906	153 aa		0.61	□□□□□ -2.31
SHE9	YDR393W	COA3	Q3E7B2	85 aa		0.61	□□□□□ -2.31
SHE9	YDR393W	UBC4	P15731	148 aa		0.6	□□□□□ -2.31
SHE9	YDR393W	AHC2	P25649	128 aa		0.6	□□□□□ -2.31
SHE9	YDR393W	EMP24	P32803	203 aa	Known RBP	0.6	□□□□□ -2.31
SHE9	YDR393W	SFT2	P38166	215 aa		0.6	□□□□□ -2.31
SHE9	YDR393W	NVJ1	P38881	321 aa		0.6	□□□□□ -2.31
SHE9	YDR393W	YAL064W	P39711	94 aa		0.6	□□□□□ -2.31
SHE9	YDR393W	AIM19	P40502	157 aa		0.6	□□□□□ -2.31
SHE9	YDR393W	EMC5	P40540	141 aa		0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms