RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeastyeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA1YDR358W FPR1P20081 114 aaKnown RBP2.6□□□□□ -1.99
GGA1YDR358W YLR365WQ7LIF2 110 aa2.6□□□□□ -1.99
GGA1YDR358W RTC6O14464 93 aa2.6□□□□□ -1.99
GGA1YDR358W YHR213WP0CI67 198 aa2.6□□□□□ -1.99
GGA1YDR358W EMP24P32803 203 aaKnown RBP2.6□□□□□ -1.99
GGA1YDR358W ATG8P38182 117 aaRIP-Chip data2.6□□□□□ -1.99not detected
GGA1YDR358W SED1Q01589 338 aa2.6□□□□□ -1.99
GGA1YDR358W YLR296WQ05898 108 aa2.6□□□□□ -1.99
GGA1YDR358W RPL33AP05744 107 aaKnown RBP2.59□□□□□ -2
GGA1YDR358W MRPL15P36523 253 aa2.59□□□□□ -2
GGA1YDR358W TRM732Q03496 1420 aa2.59□□□□□ -2
GGA1YDR358W FIT1Q04433 528 aa2.59□□□□□ -2
GGA1YDR358W YGL014C-AP0C5N1 53 aa2.58□□□□□ -2
GGA1YDR358W YEA6P39953 335 aa2.58□□□□□ -2
GGA1YDR358W YMR103CQ04436 120 aa2.58□□□□□ -2
GGA1YDR358W YPL261CQ08976 102 aa2.58□□□□□ -2
GGA1YDR358W PFY1P07274 126 aa2.57□□□□□ -2
GGA1YDR358W UBC5P15732 148 aa2.57□□□□□ -2
GGA1YDR358W BUD23P25627 275 aaPredicted RBP2.57□□□□□ -2
GGA1YDR358W AIM18P38884 321 aa2.57□□□□□ -2
GGA1YDR358W IGO1P53897 168 aa2.57□□□□□ -2
GGA1YDR358W YRF1-1P0CX20 1796 aa2.57□□□□□ -2
GGA1YDR358W YRF1-5P0CX21 1796 aa2.57□□□□□ -2
GGA1YDR358W YRF1-8P0CX22 1796 aa2.57□□□□□ -2
GGA1YDR358W DOP1Q03921 1698 aa2.57□□□□□ -2
GGA1YDR358W HAP2P06774 265 aa2.57□□□□□ -2
GGA1YDR358W RPL40AP0CH08 128 aaKnown RBP2.57□□□□□ -2
GGA1YDR358W RPL40BP0CH09 128 aaKnown RBP2.57□□□□□ -2
GGA1YDR358W YHR130CP38834 111 aa2.57□□□□□ -2
GGA1YDR358W HPA2Q06592 156 aa2.57□□□□□ -2
GGA1YDR358W DAD1Q12248 94 aa2.57□□□□□ -2
GGA1YDR358W SKI3P17883 1432 aaKnown RBP2.56□□□□□ -2
GGA1YDR358W YER187WP40102 141 aa2.56□□□□□ -2
GGA1YDR358W GTT1P40582 234 aa2.56□□□□□ -2
GGA1YDR358W LST8P41318 303 aa2.56□□□□□ -2
GGA1YDR358W YPR203WQ08994 102 aa2.56□□□□□ -2
GGA1YDR358W OST5Q92316 86 aa2.56□□□□□ -2
GGA1YDR358W YPK9Q12697 1472 aa2.55□□□□□ -2
GGA1YDR358W SWC7Q06707 132 aa2.55□□□□□ -2
GGA1YDR358W KRE5P22023 1365 aa2.55□□□□□ -2
GGA1YDR358W YMR122CQ03879 124 aa2.54□□□□□ -2
GGA1YDR358W YMR090WQ04304 227 aaKnown RBP2.54□□□□□ -2
GGA1YDR358W SEN15Q04675 128 aa2.54□□□□□ -2
GGA1YDR358W RIF1P29539 1916 aa2.54□□□□□ -2
GGA1YDR358W VPS15P22219 1454 aa2.54□□□□□ -2
GGA1YDR358W TY1B-BRQ12193 1756 aa2.54□□□□□ -2
GGA1YDR358W TY1B-GR3Q12316 1755 aa2.54□□□□□ -2
GGA1YDR358W TY1B-ORQ92393 1755 aa2.54□□□□□ -2
GGA1YDR358W PAU12P53343 120 aa2.53□□□□□ -2
GGA1YDR358W CDC39P25655 2108 aaKnown RBP2.53□□□□□ -2
GGA1YDR358W YJL197C-AP0C5P0 93 aa2.53□□□□□ -2
GGA1YDR358W YLR194CQ05777 254 aa2.53□□□□□ -2
GGA1YDR358W CYR1P08678 2026 aaKnown RBP2.52□□□□□ -2.01
GGA1YDR358W ESP1Q03018 1630 aa2.52□□□□□ -2.01
GGA1YDR358W VMA21P41806 77 aa2.52□□□□□ -2.01
GGA1YDR358W HUR1P45820 110 aa2.52□□□□□ -2.01
GGA1YDR358W YIL014C-AQ02598 104 aa2.52□□□□□ -2.01
GGA1YDR358W RPL22BP56628 122 aaKnown RBP2.51□□□□□ -2.01
GGA1YDR358W PCC1Q3E833 88 aa2.51□□□□□ -2.01
GGA1YDR358W YOS1Q3E834 85 aa2.51□□□□□ -2.01
GGA1YDR358W DNF3Q12674 1656 aa2.51□□□□□ -2.01
GGA1YDR358W YHL037CP38733 133 aa2.5□□□□□ -2.01
GGA1YDR358W SNN1P48232 102 aa2.5□□□□□ -2.01
GGA1YDR358W IRC21Q04772 201 aa2.5□□□□□ -2.01
GGA1YDR358W YCL001W-BQ96VH2 84 aa2.5□□□□□ -2.01
GGA1YDR358W COA4Q05809 96 aa2.5□□□□□ -2.01
GGA1YDR358W YHR212W-AP0CX91 67 aa2.49□□□□□ -2.01
GGA1YDR358W PRM3Q08931 133 aa2.49□□□□□ -2.01
GGA1YDR358W COA6Q3E846 104 aa2.49□□□□□ -2.01
GGA1YDR358W LYS2P07702 1392 aa2.48□□□□□ -2.01
GGA1YDR358W NUP170P38181 1502 aa2.48□□□□□ -2.01
GGA1YDR358W MIC10Q96VH5 97 aa2.48□□□□□ -2.01
GGA1YDR358W UFD4P33202 1483 aa2.48□□□□□ -2.01
GGA1YDR358W PDR11P40550 1411 aa2.48□□□□□ -2.01
GGA1YDR358W UBC4P15731 148 aa2.47□□□□□ -2.01
GGA1YDR358W PAU2P32612 120 aa2.47□□□□□ -2.01
GGA1YDR358W SRX1P36077 127 aa2.47□□□□□ -2.01
GGA1YDR358W ACC1Q00955 2233 aaKnown RBP2.47□□□□□ -2.01
GGA1YDR358W SCC2Q04002 1493 aa2.47□□□□□ -2.01
GGA1YDR358W GEA1P47102 1408 aaPredicted RBP2.47□□□□□ -2.01
GGA1YDR358W SPO14P36126 1683 aa2.46□□□□□ -2.02
GGA1YDR358W AQY2P0CD90 149 aa2.46□□□□□ -2.02
GGA1YDR358W COX23P38824 151 aa2.46□□□□□ -2.02
GGA1YDR358W PAU19P0CE85 124 aa2.45□□□□□ -2.02
GGA1YDR358W PAU3P25610 124 aa2.45□□□□□ -2.02
GGA1YDR358W PAU24P38155 120 aa2.45□□□□□ -2.02
GGA1YDR358W AIM4P38305 123 aaPredicted RBP2.45□□□□□ -2.02
GGA1YDR358W YIR020CP40575 100 aa2.45□□□□□ -2.02
GGA1YDR358W TY1B-HO13535 1793 aa2.44□□□□□ -2.02
GGA1YDR358W YSF3P0C074 85 aaPredicted RBP2.44□□□□□ -2.02
GGA1YDR358W POR2P40478 281 aa2.44□□□□□ -2.02
GGA1YDR358W YLR363W-AQ3E747 85 aa2.44□□□□□ -2.02
GGA1YDR358W TY1B-DR5P0C2I2 1755 aa2.44□□□□□ -2.02
GGA1YDR358W TY1B-DR6P0C2I3 1755 aa2.44□□□□□ -2.02
GGA1YDR358W TY1B-LR2P0C2I5 1755 aa2.44□□□□□ -2.02
GGA1YDR358W TY1B-LR3P0C2I6 1755 aaKnown RBP2.44□□□□□ -2.02
GGA1YDR358W TY1B-PR1P0C2I9 1755 aaKnown RBP2.44□□□□□ -2.02
GGA1YDR358W TY1B-PR2P0C2J0 1756 aa2.44□□□□□ -2.02
GGA1YDR358W TY1B-PR3P0C2J1 1755 aaKnown RBP2.44□□□□□ -2.02
GGA1YDR358W TY2B-LR1P0C2J3 1770 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms