RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W YNL033WP53964 284 aa1.29□□□□□ -2.2
SSF2YDR312W TLG1Q03322 224 aa1.29□□□□□ -2.2
SSF2YDR312W TAR1Q8TGM6 124 aa1.29□□□□□ -2.2
SSF2YDR312W PAM17P36147 197 aa1.28□□□□□ -2.2
SSF2YDR312W YER137CP40083 148 aaKnown RBP1.28□□□□□ -2.2
SSF2YDR312W YJL218WP40892 196 aaKnown RBP1.28□□□□□ -2.2
SSF2YDR312W HSK3P69852 69 aa1.28□□□□□ -2.2
SSF2YDR312W TMA20P89886 181 aaPredicted RBP1.28□□□□□ -2.2
SSF2YDR312W ATP20Q12233 115 aa1.28□□□□□ -2.2
SSF2YDR312W COX8P04039 78 aa1.27□□□□□ -2.21
SSF2YDR312W ANB1P19211 157 aa1.27□□□□□ -2.21
SSF2YDR312W RPB7P34087 171 aa1.27□□□□□ -2.21
SSF2YDR312W YBR032WP38223 100 aa1.27□□□□□ -2.21
SSF2YDR312W YHL018WP38744 120 aaPredicted RBP1.27□□□□□ -2.21
SSF2YDR312W IPT1P38954 527 aa1.27□□□□□ -2.21
SSF2YDR312W MPM1P40364 252 aa1.27□□□□□ -2.21
SSF2YDR312W YIP3P53633 176 aa1.27□□□□□ -2.21
SSF2YDR312W VPS28Q02767 242 aa1.27□□□□□ -2.21
SSF2YDR312W UPS1Q05776 175 aa1.27□□□□□ -2.21
SSF2YDR312W ADK1P07170 222 aaKnown RBP1.26□□□□□ -2.21
SSF2YDR312W RRT1P38192 103 aa1.26□□□□□ -2.21
SSF2YDR312W YNL200CP40165 246 aaKnown RBP1.26□□□□□ -2.21
SSF2YDR312W YFL065CP43539 102 aa1.26□□□□□ -2.21
SSF2YDR312W NQM1P53228 333 aaPredicted RBP1.26□□□□□ -2.21
SSF2YDR312W UPS3Q04006 179 aa1.26□□□□□ -2.21
SSF2YDR312W GAL83Q04739 417 aa1.26□□□□□ -2.21
SSF2YDR312W YOS1Q3E834 85 aa1.26□□□□□ -2.21
SSF2YDR312W VAR1P02381 398 aa1.25□□□□□ -2.21
SSF2YDR312W YBL010CP32788 280 aa1.25□□□□□ -2.21
SSF2YDR312W MRPL38P35996 138 aaPredicted RBP1.25□□□□□ -2.21
SSF2YDR312W RPS20P38701 121 aaKnown RBP1.25□□□□□ -2.21
SSF2YDR312W RRP17Q04031 235 aaPredicted RBP1.25□□□□□ -2.21
SSF2YDR312W YOR289WQ12012 251 aaPredicted RBP1.25□□□□□ -2.21
SSF2YDR312W NSL1Q12143 216 aa1.25□□□□□ -2.21
SSF2YDR312W RAD6P06104 172 aa1.24□□□□□ -2.21
SSF2YDR312W DLS1P40366 167 aa1.24□□□□□ -2.21
SSF2YDR312W SGF11Q03067 99 aa1.24□□□□□ -2.21
SSF2YDR312W MAK3Q03503 176 aa1.24□□□□□ -2.21
SSF2YDR312W YMR007WQ03675 126 aa1.24□□□□□ -2.21
SSF2YDR312W YMR252CQ04814 134 aa1.24□□□□□ -2.21
SSF2YDR312W YPD1Q07688 167 aa1.24□□□□□ -2.21
SSF2YDR312W VAM10Q08474 114 aa1.24□□□□□ -2.21
SSF2YDR312W HUT1Q12520 339 aa1.24□□□□□ -2.21
SSF2YDR312W NSE4P43124 402 aa1.23□□□□□ -2.21
SSF2YDR312W SBH1P52870 82 aa1.23□□□□□ -2.21
SSF2YDR312W FIT1Q04433 528 aa1.23□□□□□ -2.21
SSF2YDR312W YOR192C-CQ3E736 78 aa1.23□□□□□ -2.21
SSF2YDR312W YOR381W-AQ3E804 55 aa1.23□□□□□ -2.21
SSF2YDR312W QCR2P07257 368 aa1.22□□□□□ -2.21
SSF2YDR312W YCR001WP25347 104 aa1.22□□□□□ -2.21
SSF2YDR312W UBC8P28263 218 aa1.22□□□□□ -2.21
SSF2YDR312W PDX3P38075 228 aaKnown RBP1.22□□□□□ -2.21
SSF2YDR312W FYV4P38783 130 aaPredicted RBP1.22□□□□□ -2.21
SSF2YDR312W CCS1P40202 249 aaKnown RBP1.22□□□□□ -2.21
SSF2YDR312W HPM1P40481 377 aa1.22□□□□□ -2.21
SSF2YDR312W YNL019CP53975 284 aa1.22□□□□□ -2.21
SSF2YDR312W ELP6Q04868 273 aa1.22□□□□□ -2.21
SSF2YDR312W GPI11Q06636 219 aa1.22□□□□□ -2.21
SSF2YDR312W FIT2Q08906 153 aa1.22□□□□□ -2.21
SSF2YDR312W RDI1Q12434 202 aa1.22□□□□□ -2.21
SSF2YDR312W YCR101CP25607 182 aa1.21□□□□□ -2.21
SSF2YDR312W BUD23P25627 275 aaPredicted RBP1.21□□□□□ -2.21
SSF2YDR312W TRS20P38334 175 aa1.21□□□□□ -2.21
SSF2YDR312W YML079WQ03629 201 aa1.21□□□□□ -2.21
SSF2YDR312W YOL118CQ08259 102 aa1.21□□□□□ -2.21
SSF2YDR312W ATG41Q12048 136 aa1.21□□□□□ -2.21
SSF2YDR312W AHT1P29589 182 aa1.21□□□□□ -2.22
SSF2YDR312W YBR242WP38331 238 aa1.21□□□□□ -2.22
SSF2YDR312W THI74Q04083 370 aa1.21□□□□□ -2.22
SSF2YDR312W SYM1Q06563 197 aa1.21□□□□□ -2.22
SSF2YDR312W YOR011W-AQ3E807 68 aa1.21□□□□□ -2.22
SSF2YDR312W SPS2P08459 502 aa1.2□□□□□ -2.22
SSF2YDR312W PBI2P0CT04 75 aaKnown RBP1.2□□□□□ -2.22
SSF2YDR312W YPT31P38555 223 aaKnown RBP1.2□□□□□ -2.22
SSF2YDR312W YEL067CP39978 195 aa1.2□□□□□ -2.22
SSF2YDR312W HRD1Q08109 551 aa1.2□□□□□ -2.22
SSF2YDR312W FYV12Q08559 129 aa1.2□□□□□ -2.22
SSF2YDR312W PST2Q12335 198 aaKnown RBP1.2□□□□□ -2.22
SSF2YDR312W COA3Q3E7B2 85 aa1.2□□□□□ -2.22
SSF2YDR312W AME1P38313 324 aa1.19□□□□□ -2.22
SSF2YDR312W LST8P41318 303 aa1.19□□□□□ -2.22
SSF2YDR312W GNA1P43577 159 aaPredicted RBP1.19□□□□□ -2.22
SSF2YDR312W LIP1Q03579 150 aa1.19□□□□□ -2.22
SSF2YDR312W YDR010CQ12426 110 aa1.19□□□□□ -2.22
SSF2YDR312W SEN2P16658 377 aa1.18□□□□□ -2.22
SSF2YDR312W SNU13P39990 126 aaKnown RBP1.18□□□□□ -2.22
SSF2YDR312W YGR269WP40326 108 aa1.18□□□□□ -2.22
SSF2YDR312W YGL204CP53089 101 aa1.18□□□□□ -2.22
SSF2YDR312W NMA1Q06178 401 aaKnown RBP1.18□□□□□ -2.22
SSF2YDR312W ATP5P09457 212 aa1.17□□□□□ -2.22
SSF2YDR312W RPS25BP0C0T4 108 aaKnown RBP1.17□□□□□ -2.22
SSF2YDR312W YDR034C-AP0C289 58 aa1.17□□□□□ -2.22
SSF2YDR312W AQY2P0CD90 149 aa1.17□□□□□ -2.22
SSF2YDR312W RPS11AP0CX47 156 aaKnown RBP1.17□□□□□ -2.22
SSF2YDR312W RPS11BP0CX48 156 aaKnown RBP1.17□□□□□ -2.22
SSF2YDR312W DDR48P18899 430 aaKnown RBP1.17□□□□□ -2.22
SSF2YDR312W PRE1P22141 198 aaKnown RBP1.17□□□□□ -2.22
SSF2YDR312W SNF11P38956 169 aa1.17□□□□□ -2.22
SSF2YDR312W YEL008WP40001 126 aa1.17□□□□□ -2.22
SSF2YDR312W POR2P40478 281 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms