RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W YLR159WP0CE97 114 aa2.99□□□□□ -1.93
HPR1YDR138W YLR161WP0CE98 114 aa2.99□□□□□ -1.93
HPR1YDR138W DDR48P18899 430 aaKnown RBP2.99□□□□□ -1.93
HPR1YDR138W MAK31P23059 88 aa2.99□□□□□ -1.93
HPR1YDR138W YER084WP40057 128 aa2.99□□□□□ -1.93
HPR1YDR138W ANT1Q06497 328 aa2.99□□□□□ -1.93
HPR1YDR138W ARO1P08566 1588 aaKnown RBP2.99□□□□□ -1.93
HPR1YDR138W KRE1P17260 313 aa2.99□□□□□ -1.93
HPR1YDR138W RRT15Q3E811 62 aa2.99□□□□□ -1.93
HPR1YDR138W ATG40Q99325 256 aa2.99□□□□□ -1.93
HPR1YDR138W TY3B-IQ7LHG5 1498 aaKnown RBP2.98□□□□□ -1.93
HPR1YDR138W YOL162WP0CF19 215 aa2.98□□□□□ -1.93
HPR1YDR138W NRG2P38082 220 aa2.98□□□□□ -1.93
HPR1YDR138W YBR032WP38223 100 aa2.98□□□□□ -1.93
HPR1YDR138W FYV4P38783 130 aaPredicted RBP2.98□□□□□ -1.93
HPR1YDR138W YAL064WP39711 94 aa2.98□□□□□ -1.93
HPR1YDR138W YDL157CQ12082 118 aa2.98□□□□□ -1.93
HPR1YDR138W ATO3Q12359 275 aa2.98□□□□□ -1.93
HPR1YDR138W YDR119W-AQ2V2P9 66 aa2.98□□□□□ -1.93
HPR1YDR138W DOP1Q03921 1698 aa2.98□□□□□ -1.93
HPR1YDR138W RPL40AP0CH08 128 aaKnown RBP2.98□□□□□ -1.93
HPR1YDR138W RPL40BP0CH09 128 aaKnown RBP2.98□□□□□ -1.93
HPR1YDR138W ATP15P21306 62 aa2.98□□□□□ -1.93
HPR1YDR138W RPA12P32529 125 aaKnown RBP2.98□□□□□ -1.93
HPR1YDR138W HTD2P38790 280 aaKnown RBP2.98□□□□□ -1.93
HPR1YDR138W TDA2P40045 126 aa2.98□□□□□ -1.93
HPR1YDR138W AVO2Q04749 426 aa2.98□□□□□ -1.93
HPR1YDR138W MRPS9P38120 278 aa2.97□□□□□ -1.93
HPR1YDR138W YBR292CP38357 123 aa2.97□□□□□ -1.93
HPR1YDR138W YHR125WP38831 101 aa2.97□□□□□ -1.93
HPR1YDR138W SVP26P38869 228 aa2.97□□□□□ -1.93
HPR1YDR138W PAU15P40585 124 aa2.97□□□□□ -1.93
HPR1YDR138W YFL019CP43576 117 aa2.97□□□□□ -1.93
HPR1YDR138W YDR102CQ03864 110 aa2.97□□□□□ -1.93
HPR1YDR138W MLP1Q02455 1875 aaKnown RBP2.97□□□□□ -1.93
HPR1YDR138W DNF1P32660 1571 aa2.97□□□□□ -1.93
HPR1YDR138W YHR032W-AP0C5N6 59 aa2.96□□□□□ -1.93
HPR1YDR138W YFR035CP43608 114 aa2.96□□□□□ -1.93
HPR1YDR138W SPG3Q04398 127 aaPredicted RBP2.96□□□□□ -1.93
HPR1YDR138W RPS23AP0CX29 145 aaKnown RBP2.96□□□□□ -1.94
HPR1YDR138W RPS23BP0CX30 145 aa2.96□□□□□ -1.94
HPR1YDR138W MDH2P22133 377 aa2.96□□□□□ -1.94
HPR1YDR138W SNF11P38956 169 aa2.96□□□□□ -1.94
HPR1YDR138W YER135CP40082 130 aa2.96□□□□□ -1.94
HPR1YDR138W MPC1P53157 130 aaKnown RBP2.96□□□□□ -1.94
HPR1YDR138W RSM19P53733 91 aaPredicted RBP2.96□□□□□ -1.94
HPR1YDR138W YDR042CQ03205 200 aa2.96□□□□□ -1.94
HPR1YDR138W YLR296WQ05898 108 aa2.96□□□□□ -1.94
HPR1YDR138W EMC6Q12431 108 aa2.96□□□□□ -1.94
HPR1YDR138W YLR363W-AQ3E747 85 aa2.96□□□□□ -1.94
HPR1YDR138W YLR365WQ7LIF2 110 aa2.96□□□□□ -1.94
HPR1YDR138W MSB2P32334 1306 aa2.96□□□□□ -1.94
HPR1YDR138W SOD1P00445 154 aaKnown RBP2.95□□□□□ -1.94
HPR1YDR138W RPL22AP05749 121 aaKnown RBP2.95□□□□□ -1.94
HPR1YDR138W BET1P22804 142 aa2.95□□□□□ -1.94
HPR1YDR138W ELP6Q04868 273 aa2.95□□□□□ -1.94
HPR1YDR138W YIL102C-AQ2V2P5 75 aa2.95□□□□□ -1.94
HPR1YDR138W TY4B-JP47024 1803 aa2.95□□□□□ -1.94
HPR1YDR138W SNF2P22082 1703 aa2.95□□□□□ -1.94
HPR1YDR138W TOM6P33448 61 aa2.95□□□□□ -1.94
HPR1YDR138W YKL044WP36092 106 aa2.95□□□□□ -1.94
HPR1YDR138W YNL217WP40152 326 aa2.95□□□□□ -1.94
HPR1YDR138W YFL012WP43580 148 aa2.95□□□□□ -1.94
HPR1YDR138W PAU19P0CE85 124 aa2.94□□□□□ -1.94
HPR1YDR138W PAU21P0CE86 164 aa2.94□□□□□ -1.94
HPR1YDR138W PAU22P0CE87 164 aa2.94□□□□□ -1.94
HPR1YDR138W PAU3P25610 124 aa2.94□□□□□ -1.94
HPR1YDR138W GCV3P39726 170 aaPredicted RBP2.94□□□□□ -1.94
HPR1YDR138W ECO1P43605 281 aa2.94□□□□□ -1.94
HPR1YDR138W YNR064CP53750 290 aa2.94□□□□□ -1.94
HPR1YDR138W POP3P53833 195 aaPredicted RBP2.94□□□□□ -1.94
HPR1YDR138W RIM9Q04734 239 aa2.94□□□□□ -1.94
HPR1YDR138W YML100W-AQ8TGT0 57 aa2.94□□□□□ -1.94
HPR1YDR138W YAR068WP39564 161 aa2.94□□□□□ -1.94
HPR1YDR138W SPG1P50088 95 aa2.94□□□□□ -1.94
HPR1YDR138W YOR385WQ08909 290 aa2.94□□□□□ -1.94
HPR1YDR138W YMR175W-AQ3E766 64 aa2.94□□□□□ -1.94
HPR1YDR138W NHP2P32495 156 aaPredicted RBP2.93□□□□□ -1.94
HPR1YDR138W YHL042WP38729 150 aa2.93□□□□□ -1.94
HPR1YDR138W PEP8P40335 379 aa2.93□□□□□ -1.94
HPR1YDR138W MIX14Q04341 121 aa2.93□□□□□ -1.94
HPR1YDR138W SYM1Q06563 197 aa2.93□□□□□ -1.94
HPR1YDR138W YOL014WQ08110 124 aa2.93□□□□□ -1.94
HPR1YDR138W YFL041W-AQ3E817 63 aa2.93□□□□□ -1.94
HPR1YDR138W AGA2P32781 87 aa2.93□□□□□ -1.94
HPR1YDR138W RPB7P34087 171 aa2.93□□□□□ -1.94
HPR1YDR138W VTC1P40046 129 aaRIP-Chip data2.93□□□□□ -1.94not detected
HPR1YDR138W ARC15P40518 154 aaRIP-Chip data2.93□□□□□ -1.94not detected
HPR1YDR138W MIC27P50945 234 aa2.93□□□□□ -1.94
HPR1YDR138W ATG41Q12048 136 aa2.93□□□□□ -1.94
HPR1YDR138W YML079WQ03629 201 aa2.92□□□□□ -1.94
HPR1YDR138W RPA190P10964 1664 aaKnown RBP2.92□□□□□ -1.94
HPR1YDR138W YEL028WP39989 153 aa2.91□□□□□ -1.94
HPR1YDR138W NUP188P52593 1655 aaKnown RBP2.91□□□□□ -1.94
HPR1YDR138W URA5P13298 226 aaKnown RBP2.91□□□□□ -1.94
HPR1YDR138W PAU16P35994 123 aa2.91□□□□□ -1.94
HPR1YDR138W YMR295CQ03559 197 aa2.91□□□□□ -1.94
HPR1YDR138W MZM1Q03429 123 aaPredicted RBP2.9□□□□□ -1.94
HPR1YDR138W SCS22Q6Q595 175 aa2.9□□□□□ -1.94
HPR1YDR138W ODC2Q99297 307 aa2.9□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms