RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W RPL21AQ02753 160 aaKnown RBP1.05□□□□□ -2.24
CDC36YDL165W YDR042CQ03205 200 aa1.05□□□□□ -2.24
CDC36YDL165W YDR102CQ03864 110 aa1.05□□□□□ -2.24
CDC36YDL165W ELP6Q04868 273 aa1.05□□□□□ -2.24
CDC36YDL165W FSH2Q05015 223 aa1.05□□□□□ -2.24
CDC36YDL165W MSA1Q08471 629 aa1.05□□□□□ -2.24
CDC36YDL165W POC4Q12245 148 aaPredicted RBP1.05□□□□□ -2.24
CDC36YDL165W RNH203Q12338 110 aa1.05□□□□□ -2.24
CDC36YDL165W RPL21BQ12672 160 aaKnown RBP1.05□□□□□ -2.24
CDC36YDL165W YDR119W-AQ2V2P9 66 aa1.05□□□□□ -2.24
CDC36YDL165W YMR030W-AQ3E760 96 aa1.05□□□□□ -2.24
CDC36YDL165W TSC3Q3E790 80 aa1.05□□□□□ -2.24
CDC36YDL165W YPL038W-AQ3E7B4 63 aa1.05□□□□□ -2.24
CDC36YDL165W MIC10Q96VH5 97 aa1.05□□□□□ -2.24
CDC36YDL165W BNI1P41832 1953 aa1.05□□□□□ -2.24
CDC36YDL165W ESC1Q03661 1658 aaKnown RBP1.04□□□□□ -2.24
CDC36YDL165W YAL064W-BO13512 126 aa1.04□□□□□ -2.24
CDC36YDL165W Q0255P03881 472 aa1.04□□□□□ -2.24
CDC36YDL165W RPS22AP0C0W1 130 aaKnown RBP1.04□□□□□ -2.24
CDC36YDL165W MRPL31P14063 131 aaPredicted RBP1.04□□□□□ -2.24
CDC36YDL165W RPL16BP26785 198 aaKnown RBP1.04□□□□□ -2.24
CDC36YDL165W FZF1P32805 299 aa1.04□□□□□ -2.24
CDC36YDL165W GPX1P36014 167 aa1.04□□□□□ -2.24
CDC36YDL165W YKL044WP36092 106 aa1.04□□□□□ -2.24
CDC36YDL165W YBL081WP38180 368 aaKnown RBP1.04□□□□□ -2.24
CDC36YDL165W OM14P38325 134 aa1.04□□□□□ -2.24
CDC36YDL165W YAR068WP39564 161 aa1.04□□□□□ -2.24
CDC36YDL165W TDA2P40045 126 aa1.04□□□□□ -2.24
CDC36YDL165W YER187WP40102 141 aa1.04□□□□□ -2.24
CDC36YDL165W DFG10P40526 253 aa1.04□□□□□ -2.24
CDC36YDL165W GAT4P40569 121 aa1.04□□□□□ -2.24
CDC36YDL165W YFL012WP43580 148 aa1.04□□□□□ -2.24
CDC36YDL165W KEG1P43614 200 aa1.04□□□□□ -2.24
CDC36YDL165W UBC13P52490 153 aa1.04□□□□□ -2.24
CDC36YDL165W YGR050CP53231 118 aa1.04□□□□□ -2.24
CDC36YDL165W SMD1Q02260 146 aaPredicted RBP1.04□□□□□ -2.24
CDC36YDL165W PET191Q02772 108 aa1.04□□□□□ -2.24
CDC36YDL165W MIX14Q04341 121 aa1.04□□□□□ -2.24
CDC36YDL165W LPP1Q04396 274 aa1.04□□□□□ -2.24
CDC36YDL165W SPG3Q04398 127 aaPredicted RBP1.04□□□□□ -2.24
CDC36YDL165W SPG4Q04438 115 aa1.04□□□□□ -2.24
CDC36YDL165W YMR252CQ04814 134 aa1.04□□□□□ -2.24
CDC36YDL165W LSM6Q06406 86 aaKnown RBP1.04□□□□□ -2.24
CDC36YDL165W YLR012CQ07927 99 aa1.04□□□□□ -2.24
CDC36YDL165W YOR186WQ08560 144 aa1.04□□□□□ -2.24
CDC36YDL165W SMT3Q12306 101 aaKnown RBP1.04□□□□□ -2.24
CDC36YDL165W YPL247CQ12523 523 aa1.04□□□□□ -2.24
CDC36YDL165W YLR365WQ7LIF2 110 aa1.04□□□□□ -2.24
CDC36YDL165W RPA190P10964 1664 aaKnown RBP1.04□□□□□ -2.24
CDC36YDL165W DOP1Q03921 1698 aa1.04□□□□□ -2.24
CDC36YDL165W DUR1,2P32528 1835 aaKnown RBP1.03□□□□□ -2.24
CDC36YDL165W COX9P07255 59 aa1.03□□□□□ -2.24
CDC36YDL165W RPL16AP26784 199 aaKnown RBP1.03□□□□□ -2.24
CDC36YDL165W MRPL27P36526 146 aaPredicted RBP1.03□□□□□ -2.24
CDC36YDL165W CSH1P38287 376 aa1.03□□□□□ -2.24
CDC36YDL165W GGC1P38988 300 aa1.03□□□□□ -2.24
CDC36YDL165W YEL028WP39989 153 aa1.03□□□□□ -2.24
CDC36YDL165W RSM18P40033 138 aa1.03□□□□□ -2.24
CDC36YDL165W YNL217WP40152 326 aa1.03□□□□□ -2.24
CDC36YDL165W YNL200CP40165 246 aaKnown RBP1.03□□□□□ -2.24
CDC36YDL165W YFL019CP43576 117 aa1.03□□□□□ -2.24
CDC36YDL165W HUR1P45820 110 aa1.03□□□□□ -2.24
CDC36YDL165W PIR5P46999 287 aa1.03□□□□□ -2.24
CDC36YDL165W YPS5P53057 165 aa1.03□□□□□ -2.24
CDC36YDL165W BOL2P53082 120 aa1.03□□□□□ -2.24
CDC36YDL165W YGL193CP53097 103 aa1.03□□□□□ -2.24
CDC36YDL165W PIR1Q03178 341 aa1.03□□□□□ -2.24
CDC36YDL165W YMR295CQ03559 197 aa1.03□□□□□ -2.24
CDC36YDL165W ICY1Q04329 127 aa1.03□□□□□ -2.24
CDC36YDL165W SYM1Q06563 197 aa1.03□□□□□ -2.24
CDC36YDL165W MIM1Q08176 113 aa1.03□□□□□ -2.24
CDC36YDL165W YOL160WQ08321 113 aa1.03□□□□□ -2.24
CDC36YDL165W NIP7Q08962 181 aaKnown RBP1.03□□□□□ -2.24
CDC36YDL165W YPL261CQ08976 102 aa1.03□□□□□ -2.24
CDC36YDL165W YDR381C-AQ3E6R5 114 aa1.03□□□□□ -2.24
CDC36YDL165W YMR175W-AQ3E766 64 aa1.03□□□□□ -2.24
CDC36YDL165W YKL018C-AQ3E7A7 99 aa1.03□□□□□ -2.24
CDC36YDL165W YIL177CP40434 1758 aa1.03□□□□□ -2.24
CDC36YDL165W YJL225CP40889 1758 aa1.03□□□□□ -2.24
CDC36YDL165W YRF1-3P0CX14 1859 aa1.03□□□□□ -2.25
CDC36YDL165W YRF1-7P0CX15 1859 aa1.03□□□□□ -2.25
CDC36YDL165W YRF1-6P53819 1859 aa1.03□□□□□ -2.25
CDC36YDL165W YPR096CO13587 100 aa1.02□□□□□ -2.25
CDC36YDL165W DDR48P18899 430 aaKnown RBP1.02□□□□□ -2.25
CDC36YDL165W QCR9P22289 66 aa1.02□□□□□ -2.25
CDC36YDL165W ROX3P25046 220 aa1.02□□□□□ -2.25
CDC36YDL165W BUD3P25558 1636 aa1.02□□□□□ -2.25
CDC36YDL165W IMP1P28627 190 aa1.02□□□□□ -2.25
CDC36YDL165W RIF1P29539 1916 aa1.02□□□□□ -2.25
CDC36YDL165W FPR2P32472 135 aa1.02□□□□□ -2.25
CDC36YDL165W AGA2P32781 87 aa1.02□□□□□ -2.25
CDC36YDL165W URB1P34241 1764 aaKnown RBP1.02□□□□□ -2.25
CDC36YDL165W YSY6P38374 65 aa1.02□□□□□ -2.25
CDC36YDL165W VMR1P38735 1592 aa1.02□□□□□ -2.25
CDC36YDL165W DSE2P38844 325 aa1.02□□□□□ -2.25
CDC36YDL165W YER135CP40082 130 aa1.02□□□□□ -2.25
CDC36YDL165W YFR035CP43608 114 aa1.02□□□□□ -2.25
CDC36YDL165W CIS3P47001 227 aa1.02□□□□□ -2.25
CDC36YDL165W VPS55P47111 140 aa1.02□□□□□ -2.25
CDC36YDL165W IML1P47170 1584 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms