RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W YMR206WQ03695 313 aa1.71□□□□□ -2.14
USO1YDL058W YLR296WQ05898 108 aa1.71□□□□□ -2.14
USO1YDL058W MIM1Q08176 113 aa1.71□□□□□ -2.14
USO1YDL058W ATG5Q12380 294 aa1.71□□□□□ -2.14
USO1YDL058W Q0142Q9ZZW4 58 aa1.71□□□□□ -2.14
USO1YDL058W ROM2P51862 1356 aaKnown RBP1.71□□□□□ -2.14
USO1YDL058W YJL171CP46992 396 aa1.71□□□□□ -2.14
USO1YDL058W MPC3P53311 146 aa1.71□□□□□ -2.14
USO1YDL058W PET191Q02772 108 aa1.71□□□□□ -2.14
USO1YDL058W PBP4Q07362 185 aaKnown RBP1.71□□□□□ -2.14
USO1YDL058W GAT3Q07928 141 aa1.71□□□□□ -2.14
USO1YDL058W YLR111WQ12528 110 aa1.71□□□□□ -2.14
USO1YDL058W RPL2AP0CX45 254 aaKnown RBP1.71□□□□□ -2.14
USO1YDL058W RPL2BP0CX46 254 aaKnown RBP1.71□□□□□ -2.14
USO1YDL058W QCR10P37299 77 aa1.71□□□□□ -2.14
USO1YDL058W YHR140WP38842 239 aa1.71□□□□□ -2.14
USO1YDL058W YOL118CQ08259 102 aa1.71□□□□□ -2.14
USO1YDL058W NIP7Q08962 181 aaKnown RBP1.71□□□□□ -2.14
USO1YDL058W YKL065W-AQ2V2P2 73 aa1.71□□□□□ -2.14
USO1YDL058W TIM9O74700 87 aa1.7□□□□□ -2.14
USO1YDL058W SFT1P43682 97 aa1.7□□□□□ -2.14
USO1YDL058W SGF11Q03067 99 aa1.7□□□□□ -2.14
USO1YDL058W YOL029CQ08187 201 aa1.7□□□□□ -2.14
USO1YDL058W SRL1Q08673 210 aa1.7□□□□□ -2.14
USO1YDL058W RPL15AP05748 204 aaKnown RBP1.7□□□□□ -2.14
USO1YDL058W AGA1P32323 725 aa1.7□□□□□ -2.14
USO1YDL058W PAU16P35994 123 aa1.7□□□□□ -2.14
USO1YDL058W VRP1P37370 817 aa1.7□□□□□ -2.14
USO1YDL058W YIL102CP40488 101 aa1.7□□□□□ -2.14
USO1YDL058W PAU15P40585 124 aa1.7□□□□□ -2.14
USO1YDL058W PAL1Q05518 499 aaKnown RBP1.7□□□□□ -2.14
USO1YDL058W YHR007C-AQ07074 71 aa1.7□□□□□ -2.14
USO1YDL058W YOR072WQ08486 104 aa1.7□□□□□ -2.14
USO1YDL058W YPL229WQ99395 206 aa1.7□□□□□ -2.14
USO1YDL058W ANS1P38832 159 aa1.7□□□□□ -2.14
USO1YDL058W YJL028WP47062 111 aa1.7□□□□□ -2.14
USO1YDL058W VPS55P47111 140 aa1.7□□□□□ -2.14
USO1YDL058W NRM1P53718 249 aa1.7□□□□□ -2.14
USO1YDL058W SNF2P22082 1703 aa1.7□□□□□ -2.14
USO1YDL058W YNL195CP40168 261 aa1.7□□□□□ -2.14
USO1YDL058W NCA3P46955 337 aa1.7□□□□□ -2.14
USO1YDL058W YGR219WP53307 113 aa1.7□□□□□ -2.14
USO1YDL058W YOR387CQ08910 206 aa1.7□□□□□ -2.14
USO1YDL058W YGL041C-BQ3E750 60 aa1.7□□□□□ -2.14
USO1YDL058W YPL038W-AQ3E7B4 63 aa1.7□□□□□ -2.14
USO1YDL058W PCP1P53259 346 aa1.69□□□□□ -2.14
USO1YDL058W YOR097CQ12274 175 aaPredicted RBP1.69□□□□□ -2.14
USO1YDL058W YIL134C-AQ45U18 67 aa1.69□□□□□ -2.14
USO1YDL058W TDA8Q6B2U8 126 aa1.69□□□□□ -2.14
USO1YDL058W UTH1P36135 365 aa1.69□□□□□ -2.14
USO1YDL058W VTC1P40046 129 aaRIP-Chip data1.69□□□□□ -2.14not detected
USO1YDL058W YGR269WP40326 108 aa1.69□□□□□ -2.14
USO1YDL058W SMD3P43321 101 aaKnown RBP1.69□□□□□ -2.14
USO1YDL058W YFL067WP43537 175 aa1.69□□□□□ -2.14
USO1YDL058W SPC1P46965 94 aa1.69□□□□□ -2.14
USO1YDL058W MIC27P50945 234 aa1.69□□□□□ -2.14
USO1YDL058W EMP24P32803 203 aaKnown RBP1.69□□□□□ -2.14
USO1YDL058W YMR141CP40211 102 aa1.69□□□□□ -2.14
USO1YDL058W YIL014C-AQ02598 104 aa1.69□□□□□ -2.14
USO1YDL058W UPS3Q04006 179 aa1.69□□□□□ -2.14
USO1YDL058W POC4Q12245 148 aaPredicted RBP1.69□□□□□ -2.14
USO1YDL058W OST5Q92316 86 aa1.69□□□□□ -2.14
USO1YDL058W SPS18P32572 300 aa1.69□□□□□ -2.14
USO1YDL058W SWT21P53873 357 aaPredicted RBP1.69□□□□□ -2.14
USO1YDL058W IGO1P53897 168 aa1.69□□□□□ -2.14
USO1YDL058W RPL15BP54780 204 aaPredicted RBP1.69□□□□□ -2.14
USO1YDL058W YOR385WQ08909 290 aa1.69□□□□□ -2.14
USO1YDL058W YLR236CA0A023PZG4 107 aa1.68□□□□□ -2.14
USO1YDL058W MRP10O75012 95 aa1.68□□□□□ -2.14
USO1YDL058W RPL22AP05749 121 aaKnown RBP1.68□□□□□ -2.14
USO1YDL058W IGD1P43598 195 aa1.68□□□□□ -2.14
USO1YDL058W COX12Q01519 83 aa1.68□□□□□ -2.14
USO1YDL058W LSM6Q06406 86 aaKnown RBP1.68□□□□□ -2.14
USO1YDL058W PFY1P07274 126 aa1.68□□□□□ -2.14
USO1YDL058W RPS19AP07280 144 aaKnown RBP1.68□□□□□ -2.14
USO1YDL058W RPS19BP07281 144 aaPredicted RBP1.68□□□□□ -2.14
USO1YDL058W RPS22AP0C0W1 130 aaKnown RBP1.68□□□□□ -2.14
USO1YDL058W YLR156WP0CE96 114 aa1.68□□□□□ -2.14
USO1YDL058W YLR159WP0CE97 114 aa1.68□□□□□ -2.14
USO1YDL058W YLR161WP0CE98 114 aa1.68□□□□□ -2.14
USO1YDL058W IMP1P28627 190 aa1.68□□□□□ -2.14
USO1YDL058W EMI1Q04406 187 aa1.68□□□□□ -2.14
USO1YDL058W SEN15Q04675 128 aa1.68□□□□□ -2.14
USO1YDL058W YOR343CQ12484 108 aa1.68□□□□□ -2.14
USO1YDL058W YLR365WQ7LIF2 110 aa1.68□□□□□ -2.14
USO1YDL058W QCR9P22289 66 aa1.68□□□□□ -2.14
USO1YDL058W YCR006CP25350 157 aa1.68□□□□□ -2.14
USO1YDL058W LDB16P25587 256 aa1.68□□□□□ -2.14
USO1YDL058W YHL018WP38744 120 aaPredicted RBP1.68□□□□□ -2.14
USO1YDL058W MRX7P53869 86 aa1.68□□□□□ -2.14
USO1YDL058W YIL102C-AQ2V2P5 75 aa1.68□□□□□ -2.14
USO1YDL058W HAL1Q01766 294 aa1.68□□□□□ -2.14
USO1YDL058W USV1Q12132 391 aa1.68□□□□□ -2.14
USO1YDL058W YOR314WQ12506 109 aa1.68□□□□□ -2.14
USO1YDL058W FKS3Q04952 1785 aa1.68□□□□□ -2.14
USO1YDL058W FZF1P32805 299 aa1.67□□□□□ -2.14
USO1YDL058W YSY6P38374 65 aa1.67□□□□□ -2.14
USO1YDL058W YHR180WP38868 163 aa1.67□□□□□ -2.14
USO1YDL058W YPL014WQ02606 381 aa1.67□□□□□ -2.14
USO1YDL058W YMR252CQ04814 134 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms