RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	HPA2	Q06592	156 aa		1.03	□□□□□ -2.24
ATP16	YDL004W	GTT2	Q12390	233 aa		1.03	□□□□□ -2.24
ATP16	YDL004W	OCA6	Q12454	224 aa		1.03	□□□□□ -2.24
ATP16	YDL004W	RPL33A	P05744	107 aa	Known RBP	1.02	□□□□□ -2.25
ATP16	YDL004W	YER188C-A	P0C0V2	99 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	YER039C-A	P0CD97	72 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	REV3	P14284	1504 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	BUD23	P25627	275 aa	Predicted RBP	1.02	□□□□□ -2.25
ATP16	YDL004W	YAR029W	P39549	74 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	YIL014C-A	Q02598	104 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	TRM732	Q03496	1420 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	SEN15	Q04675	128 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	YLR296W	Q05898	108 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	YOS1	Q3E834	85 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	YLR365W	Q7LIF2	110 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	YCL001W-B	Q96VH2	84 aa		1.02	□□□□□ -2.25
ATP16	YDL004W	PDR11	P40550	1411 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	KRE5	P22023	1365 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	YOL013W-A	P0C272	63 aa	Predicted RBP	1.01	□□□□□ -2.25
ATP16	YDL004W	YCR101C	P25607	182 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	YEA6	P39953	335 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	HUR1	P45820	110 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	YJL009W	P47078	108 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	BRP1	P53194	125 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	YOR072W	Q08486	104 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	YPL261C	Q08976	102 aa		1.01	□□□□□ -2.25
ATP16	YDL004W	YHR213W	P0CI67	198 aa		1	□□□□□ -2.25
ATP16	YDL004W	UBC5	P15732	148 aa		1	□□□□□ -2.25
ATP16	YDL004W	YNL122C	P53921	115 aa	Predicted RBP	1	□□□□□ -2.25
ATP16	YDL004W	YMR103C	Q04436	120 aa		1	□□□□□ -2.25
ATP16	YDL004W	YLR363W-A	Q3E747	85 aa		1	□□□□□ -2.25
ATP16	YDL004W	OST5	Q92316	86 aa		1	□□□□□ -2.25
ATP16	YDL004W	CDC39	P25655	2108 aa	Known RBP	1	□□□□□ -2.25
ATP16	YDL004W	YPK9	Q12697	1472 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	TY1B-H	O13535	1793 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	YGL014C-A	P0C5N1	53 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	AIM18	P38884	321 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	YER187W	P40102	141 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	YFR035C	P43608	114 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	SNN1	P48232	102 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	RSM19	P53733	91 aa	Predicted RBP	0.99	□□□□□ -2.25
ATP16	YDL004W	RPL22B	P56628	122 aa	Known RBP	0.99	□□□□□ -2.25
ATP16	YDL004W	FIT3	Q08907	204 aa		0.99	□□□□□ -2.25
ATP16	YDL004W	HFA1	P32874	2273 aa		0.98	□□□□□ -2.25
ATP16	YDL004W	YJL197C-A	P0C5P0	93 aa		0.98	□□□□□ -2.25
ATP16	YDL004W	YHR138C	P38841	114 aa	Predicted RBP	0.98	□□□□□ -2.25
ATP16	YDL004W	GCV3	P39726	170 aa	Predicted RBP	0.98	□□□□□ -2.25
ATP16	YDL004W	EMC5	P40540	141 aa		0.98	□□□□□ -2.25
ATP16	YDL004W	MIX14	Q04341	121 aa		0.98	□□□□□ -2.25
ATP16	YDL004W	YCL048W-A	Q2V2Q2	79 aa		0.98	□□□□□ -2.25
ATP16	YDL004W	YGL041C-B	Q3E750	60 aa		0.98	□□□□□ -2.25
ATP16	YDL004W	SUS1	Q6WNK7	96 aa		0.98	□□□□□ -2.25
ATP16	YDL004W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.98	□□□□□ -2.25
ATP16	YDL004W	LYS2	P07702	1392 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	RTC6	O14464	93 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	UBC4	P15731	148 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	EMP24	P32803	203 aa	Known RBP	0.97	□□□□□ -2.25
ATP16	YDL004W	SRX1	P36077	127 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	ICS3	P47034	131 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	YMR122C	Q03879	124 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	YMR321C	Q04898	105 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	PCC1	Q3E833	88 aa		0.97	□□□□□ -2.25
ATP16	YDL004W	ROM2	P51862	1356 aa	Known RBP	0.96	□□□□□ -2.26
ATP16	YDL004W	RPL22A	P05749	121 aa	Known RBP	0.96	□□□□□ -2.26
ATP16	YDL004W	RPS22A	P0C0W1	130 aa	Known RBP	0.96	□□□□□ -2.26
ATP16	YDL004W	TRS20	P38334	175 aa		0.96	□□□□□ -2.26
ATP16	YDL004W	HHY1	P39982	102 aa		0.96	□□□□□ -2.26
ATP16	YDL004W	MSL1	P40567	111 aa	Predicted RBP	0.96	□□□□□ -2.26
ATP16	YDL004W	LST8	P41318	303 aa		0.96	□□□□□ -2.26
ATP16	YDL004W	MGR2	Q02889	113 aa		0.96	□□□□□ -2.26
ATP16	YDL004W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.96	□□□□□ -2.26
ATP16	YDL004W	YOR376W-A	Q3E805	51 aa		0.96	□□□□□ -2.26
ATP16	YDL004W	RSF2	P46974	1380 aa		0.96	□□□□□ -2.26
ATP16	YDL004W	YHL005C	P38752	130 aa		0.95	□□□□□ -2.26
ATP16	YDL004W	YHR130C	P38834	111 aa		0.95	□□□□□ -2.26
ATP16	YDL004W	POR2	P40478	281 aa		0.95	□□□□□ -2.26
ATP16	YDL004W	COA4	Q05809	96 aa		0.95	□□□□□ -2.26
ATP16	YDL004W	YHR213W-B	Q8TGK1	99 aa		0.95	□□□□□ -2.26
ATP16	YDL004W	SSN2	P38931	1420 aa		0.95	□□□□□ -2.26
ATP16	YDL004W	PAU19	P0CE85	124 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	PAU3	P25610	124 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	MRP17	P28778	131 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	SNU13	P39990	126 aa	Known RBP	0.94	□□□□□ -2.26
ATP16	YDL004W	CYB5	P40312	120 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	YLR194C	Q05777	254 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	YOL118C	Q08259	102 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	YCR075W-A	Q3E830	75 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	MIC10	Q96VH5	97 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	LTE1	P07866	1435 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	YLR419W	Q06698	1435 aa	Known RBP	0.94	□□□□□ -2.26
ATP16	YDL004W	YRF1-3	P0CX14	1859 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	YRF1-7	P0CX15	1859 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	YRF1-6	P53819	1859 aa		0.94	□□□□□ -2.26
ATP16	YDL004W	ECM12	O13529	151 aa		0.93	□□□□□ -2.26
ATP16	YDL004W	YSF3	P0C074	85 aa	Predicted RBP	0.93	□□□□□ -2.26
ATP16	YDL004W	RPL40A	P0CH08	128 aa	Known RBP	0.93	□□□□□ -2.26
ATP16	YDL004W	RPL40B	P0CH09	128 aa	Known RBP	0.93	□□□□□ -2.26
ATP16	YDL004W	MRPL31	P14063	131 aa	Predicted RBP	0.93	□□□□□ -2.26
ATP16	YDL004W	PDX3	P38075	228 aa	Known RBP	0.93	□□□□□ -2.26
ATP16	YDL004W	YIL163C	P40448	117 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms