RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	MRPL11	P36521	249 aa	Predicted RBP	2.98	□□□□□ -1.93
SMP1	YBR182C	IGO1	P53897	168 aa		2.98	□□□□□ -1.93
SMP1	YBR182C	YPL067C	Q02754	198 aa		2.98	□□□□□ -1.93
SMP1	YBR182C	POL1	P13382	1468 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	YER187W	P40102	141 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	YFL051C	P43552	160 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	KSH1	Q8TGJ3	72 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	TAR1	Q8TGM6	124 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	MIC10	Q96VH5	97 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	RPO31	P04051	1460 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	SCC2	Q04002	1493 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	BPT1	P14772	1559 aa		2.97	□□□□□ -1.93
SMP1	YBR182C	RPL13B	P40212	199 aa	Known RBP	2.96	□□□□□ -1.94
SMP1	YBR182C	HUR1	P45820	110 aa		2.96	□□□□□ -1.94
SMP1	YBR182C	NHP10	Q03435	203 aa		2.96	□□□□□ -1.94
SMP1	YBR182C	YPL261C	Q08976	102 aa		2.96	□□□□□ -1.94
SMP1	YBR182C	RKR1	Q04781	1562 aa		2.96	□□□□□ -1.94
SMP1	YBR182C	YGL010W	P25338	174 aa		2.95	□□□□□ -1.94
SMP1	YBR182C	YHR130C	P38834	111 aa		2.95	□□□□□ -1.94
SMP1	YBR182C	GTT1	P40582	234 aa		2.95	□□□□□ -1.94
SMP1	YBR182C	YNL146C-A	Q3E7Z1	64 aa		2.95	□□□□□ -1.94
SMP1	YBR182C	MHF1	Q3E835	90 aa		2.95	□□□□□ -1.94
SMP1	YBR182C	SMC4	Q12267	1418 aa		2.95	□□□□□ -1.94
SMP1	YBR182C	YRF1-3	P0CX14	1859 aa		2.94	□□□□□ -1.94
SMP1	YBR182C	YRF1-7	P0CX15	1859 aa		2.94	□□□□□ -1.94
SMP1	YBR182C	YRF1-6	P53819	1859 aa		2.94	□□□□□ -1.94
SMP1	YBR182C	RTC6	O14464	93 aa		2.94	□□□□□ -1.94
SMP1	YBR182C	RPL40A	P0CH08	128 aa	Known RBP	2.94	□□□□□ -1.94
SMP1	YBR182C	RPL40B	P0CH09	128 aa	Known RBP	2.94	□□□□□ -1.94
SMP1	YBR182C	DAD1	Q12248	94 aa		2.94	□□□□□ -1.94
SMP1	YBR182C	COA6	Q3E846	104 aa		2.94	□□□□□ -1.94
SMP1	YBR182C	RSF2	P46974	1380 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	YJL197C-A	P0C5P0	93 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	YEL008W	P40001	126 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	VMA21	P41806	77 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	SCP1	Q08873	200 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	YGL194C-A	Q2V2P6	80 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	OST5	Q92316	86 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	RIF1	P29539	1916 aa		2.93	□□□□□ -1.94
SMP1	YBR182C	YCF1	P39109	1515 aa	Known RBP	2.92	□□□□□ -1.94
SMP1	YBR182C	SNU13	P39990	126 aa	Known RBP	2.92	□□□□□ -1.94
SMP1	YBR182C	LTE1	P07866	1435 aa		2.92	□□□□□ -1.94
SMP1	YBR182C	PDR10	P51533	1564 aa		2.92	□□□□□ -1.94
SMP1	YBR182C	MYO4	P32492	1471 aa		2.92	□□□□□ -1.94
SMP1	YBR182C	MMS22	Q06164	1454 aa		2.92	□□□□□ -1.94
SMP1	YBR182C	RPL36B	O14455	100 aa	Known RBP	2.91	□□□□□ -1.94
SMP1	YBR182C	RPL36A	P05745	100 aa	Predicted RBP	2.91	□□□□□ -1.94
SMP1	YBR182C	PAU12	P53343	120 aa		2.91	□□□□□ -1.94
SMP1	YBR182C	MIX14	Q04341	121 aa		2.91	□□□□□ -1.94
SMP1	YBR182C	FPR1	P20081	114 aa	Known RBP	2.9	□□□□□ -1.94
SMP1	YBR182C	VAM10	Q08474	114 aa		2.9	□□□□□ -1.94
SMP1	YBR182C	FIT3	Q08907	204 aa		2.9	□□□□□ -1.94
SMP1	YBR182C	YLR296W	Q05898	108 aa		2.89	□□□□□ -1.95
SMP1	YBR182C	COA3	Q3E7B2	85 aa		2.89	□□□□□ -1.95
SMP1	YBR182C	CDC25	P04821	1589 aa		2.89	□□□□□ -1.95
SMP1	YBR182C	YBR027C	P38220	110 aa		2.88	□□□□□ -1.95
SMP1	YBR182C	ESC1	Q03661	1658 aa	Known RBP	2.88	□□□□□ -1.95
SMP1	YBR182C	YCL042W	P25572	119 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	PAU2	P32612	120 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	YIR020C	P40575	100 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	RPL22B	P56628	122 aa	Known RBP	2.87	□□□□□ -1.95
SMP1	YBR182C	YIL014C-A	Q02598	104 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	YDR029W	Q12111	104 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	SNQ2	P32568	1501 aa	Known RBP	2.87	□□□□□ -1.95
SMP1	YBR182C	YHR213W	P0CI67	198 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	SNN1	P48232	102 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	SED1	Q01589	338 aa		2.87	□□□□□ -1.95
SMP1	YBR182C	TY2B-LR1	P0C2J3	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-F	P0CX63	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-GR2	P0CX64	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-C	P25384	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-DR2	Q03494	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY1B-DR1	Q03855	1755 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-DR3	Q07791	1770 aa	Known RBP	2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-OR1	Q12113	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-DR1	Q12472	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	TY2B-OR2	Q12501	1770 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	VTH1	P40438	1549 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	VTH2	P40890	1549 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	PFY1	P07274	126 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	MSL1	P40567	111 aa	Predicted RBP	2.86	□□□□□ -1.95
SMP1	YBR182C	YFL065C	P43539	102 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	YMR082C	Q04276	118 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	YLR194C	Q05777	254 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	PCC1	Q3E833	88 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	BNI1	P41832	1953 aa		2.86	□□□□□ -1.95
SMP1	YBR182C	CDC39	P25655	2108 aa	Known RBP	2.85	□□□□□ -1.95
SMP1	YBR182C	CYR1	P08678	2026 aa	Known RBP	2.85	□□□□□ -1.95
SMP1	YBR182C	YGL014C-A	P0C5N1	53 aa		2.85	□□□□□ -1.95
SMP1	YBR182C	ATG8	P38182	117 aa	RIP-Chip data	2.85	□□□□□ -1.95	not detected
SMP1	YBR182C	EMC5	P40540	141 aa		2.85	□□□□□ -1.95
SMP1	YBR182C	HPA2	Q06592	156 aa		2.85	□□□□□ -1.95
SMP1	YBR182C	RPL33A	P05744	107 aa	Known RBP	2.84	□□□□□ -1.96
SMP1	YBR182C	PAU19	P0CE85	124 aa		2.84	□□□□□ -1.96
SMP1	YBR182C	PAU3	P25610	124 aa		2.84	□□□□□ -1.96
SMP1	YBR182C	PAU24	P38155	120 aa		2.84	□□□□□ -1.96
SMP1	YBR182C	NUP159	P40477	1460 aa		2.84	□□□□□ -1.96
SMP1	YBR182C	LST8	P41318	303 aa		2.84	□□□□□ -1.96
SMP1	YBR182C	ROM2	P51862	1356 aa	Known RBP	2.84	□□□□□ -1.96
SMP1	YBR182C	PDR15	Q04182	1529 aa	Known RBP	2.84	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 108.9 ms