RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W NRM1P53718 249 aa3.9□□□□□ -1.79
CDC28YBR160W GPI19Q04082 140 aa3.9□□□□□ -1.79
CDC28YBR160W FCF1Q05498 189 aaPredicted RBP3.9□□□□□ -1.79
CDC28YBR160W GEP3Q08622 556 aa3.9□□□□□ -1.79
CDC28YBR160W DGA1Q08650 418 aa3.9□□□□□ -1.79
CDC28YBR160W VPS13Q07878 3144 aa3.89□□□□□ -1.79
CDC28YBR160W PFY1P07274 126 aa3.89□□□□□ -1.79
CDC28YBR160W YHR213WP0CI67 198 aa3.89□□□□□ -1.79
CDC28YBR160W RRT1P38192 103 aa3.89□□□□□ -1.79
CDC28YBR160W YER076CP40049 302 aa3.89□□□□□ -1.79
CDC28YBR160W YER181CP40097 107 aa3.89□□□□□ -1.79
CDC28YBR160W YJL213WP40896 331 aa3.89□□□□□ -1.79
CDC28YBR160W GAT3Q07928 141 aa3.89□□□□□ -1.79
CDC28YBR160W YDR034W-BQ6Q5X2 51 aa3.89□□□□□ -1.79
CDC28YBR160W YMR105W-AQ8TGS8 64 aa3.89□□□□□ -1.79
CDC28YBR160W BEM2P39960 2167 aaKnown RBP3.88□□□□□ -1.79
CDC28YBR160W TIR2P33890 251 aa3.88□□□□□ -1.79
CDC28YBR160W YKL070WP36087 169 aa3.88□□□□□ -1.79
CDC28YBR160W GPI18P38211 433 aa3.88□□□□□ -1.79
CDC28YBR160W YHR140WP38842 239 aa3.88□□□□□ -1.79
CDC28YBR160W MBB1P39534 108 aa3.88□□□□□ -1.79
CDC28YBR160W TOS6P48560 102 aa3.88□□□□□ -1.79
CDC28YBR160W MST27P53176 234 aa3.88□□□□□ -1.79
CDC28YBR160W YOR029WQ12243 111 aa3.88□□□□□ -1.79
CDC28YBR160W DFM1Q12743 341 aaKnown RBP3.88□□□□□ -1.79
CDC28YBR160W YKR045CP36138 183 aa3.87□□□□□ -1.79
CDC28YBR160W YJL027CP47063 138 aaPredicted RBP3.87□□□□□ -1.79
CDC28YBR160W DIA1P54005 336 aa3.87□□□□□ -1.79
CDC28YBR160W YOR097CQ12274 175 aaPredicted RBP3.87□□□□□ -1.79
CDC28YBR160W CRC1Q12289 327 aa3.87□□□□□ -1.79
CDC28YBR160W RNH203Q12338 110 aa3.87□□□□□ -1.79
CDC28YBR160W RPL39P04650 51 aa3.86□□□□□ -1.79
CDC28YBR160W COX10P21592 462 aa3.86□□□□□ -1.79
CDC28YBR160W NHP2P32495 156 aaPredicted RBP3.86□□□□□ -1.79
CDC28YBR160W ATX1P38636 73 aa3.86□□□□□ -1.79
CDC28YBR160W GLE2P40066 365 aa3.86□□□□□ -1.79
CDC28YBR160W SPI1P40092 148 aa3.86□□□□□ -1.79
CDC28YBR160W YNL217WP40152 326 aa3.86□□□□□ -1.79
CDC28YBR160W OST2P46964 130 aa3.86□□□□□ -1.79
CDC28YBR160W YIP3P53633 176 aa3.86□□□□□ -1.79
CDC28YBR160W SNA4Q07549 140 aa3.86□□□□□ -1.79
CDC28YBR160W TIM22Q12328 207 aa3.86□□□□□ -1.79
CDC28YBR160W COA3Q3E7B2 85 aa3.86□□□□□ -1.79
CDC28YBR160W YNL046WP53956 172 aa3.85□□□□□ -1.79
CDC28YBR160W FOL3Q12676 427 aaPredicted RBP3.85□□□□□ -1.79
CDC28YBR160W YCR075W-AQ3E830 75 aa3.85□□□□□ -1.79
CDC28YBR160W VAR1P02381 398 aa3.84□□□□□ -1.79
CDC28YBR160W INO4P13902 151 aa3.84□□□□□ -1.79
CDC28YBR160W ADH5P38113 351 aaKnown RBP3.84□□□□□ -1.79
CDC28YBR160W YHL037CP38733 133 aa3.84□□□□□ -1.79
CDC28YBR160W OXA1P39952 402 aa3.84□□□□□ -1.79
CDC28YBR160W YEL067CP39978 195 aa3.84□□□□□ -1.79
CDC28YBR160W YAR1P46683 200 aa3.84□□□□□ -1.79
CDC28YBR160W YNR077CP53758 84 aa3.84□□□□□ -1.79
CDC28YBR160W YNL234WP53857 426 aa3.84□□□□□ -1.79
CDC28YBR160W RPL15BP54780 204 aaPredicted RBP3.84□□□□□ -1.79
CDC28YBR160W LSM6Q06406 86 aaKnown RBP3.84□□□□□ -1.79
CDC28YBR160W MSA1Q08471 629 aa3.84□□□□□ -1.79
CDC28YBR160W YPL261CQ08976 102 aa3.84□□□□□ -1.79
CDC28YBR160W IGO2Q9P305 131 aa3.84□□□□□ -1.79
CDC28YBR160W HMRA2P0CY13 119 aa3.83□□□□□ -1.8
CDC28YBR160W YFL065CP43539 102 aa3.83□□□□□ -1.8
CDC28YBR160W YNL184CP53876 108 aa3.83□□□□□ -1.8
CDC28YBR160W UBC7Q02159 165 aa3.83□□□□□ -1.8
CDC28YBR160W YTH1Q06102 208 aaPredicted RBP3.83□□□□□ -1.8
CDC28YBR160W HPA2Q06592 156 aa3.83□□□□□ -1.8
CDC28YBR160W YPR203WQ08994 102 aa3.83□□□□□ -1.8
CDC28YBR160W ISD11Q6Q560 94 aa3.83□□□□□ -1.8
CDC28YBR160W SEN1Q00416 2231 aaKnown RBP3.83□□□□□ -1.8
CDC28YBR160W YDL022C-AP0C5L6 82 aa3.82□□□□□ -1.8
CDC28YBR160W KRE1P17260 313 aa3.82□□□□□ -1.8
CDC28YBR160W AGA1P32323 725 aa3.82□□□□□ -1.8
CDC28YBR160W KTI12P34253 313 aaKnown RBP3.82□□□□□ -1.8
CDC28YBR160W YFL051CP43552 160 aa3.82□□□□□ -1.8
CDC28YBR160W LCB3P47013 409 aa3.82□□□□□ -1.8
CDC28YBR160W EOS1P53938 366 aa3.82□□□□□ -1.8
CDC28YBR160W HFA1P32874 2273 aa3.82□□□□□ -1.8
CDC28YBR160W CCW14O13547 238 aa3.81□□□□□ -1.8
CDC28YBR160W RPS8AP0CX39 200 aaKnown RBP3.81□□□□□ -1.8
CDC28YBR160W RPS8BP0CX40 200 aaKnown RBP3.81□□□□□ -1.8
CDC28YBR160W LDB16P25587 256 aa3.81□□□□□ -1.8
CDC28YBR160W POR2P40478 281 aa3.81□□□□□ -1.8
CDC28YBR160W SED1Q01589 338 aa3.81□□□□□ -1.8
CDC28YBR160W MRPL23Q12487 163 aaPredicted RBP3.81□□□□□ -1.8
CDC28YBR160W YOR304C-AO14468 76 aa3.8□□□□□ -1.8
CDC28YBR160W RPL42AP0CX27 106 aaKnown RBP3.8□□□□□ -1.8
CDC28YBR160W RPL42BP0CX28 106 aaKnown RBP3.8□□□□□ -1.8
CDC28YBR160W RPA12P32529 125 aaKnown RBP3.8□□□□□ -1.8
CDC28YBR160W IES6P32617 166 aa3.8□□□□□ -1.8
CDC28YBR160W MRPL49P40858 161 aaPredicted RBP3.8□□□□□ -1.8
CDC28YBR160W YFR057WP43625 151 aa3.8□□□□□ -1.8
CDC28YBR160W YLR194CQ05777 254 aa3.8□□□□□ -1.8
CDC28YBR160W YOL160WQ08321 113 aa3.8□□□□□ -1.8
CDC28YBR160W YDL009CQ12210 107 aa3.8□□□□□ -1.8
CDC28YBR160W JID1Q12350 301 aa3.8□□□□□ -1.8
CDC28YBR160W YOR008C-AQ3E7B9 74 aa3.8□□□□□ -1.8
CDC28YBR160W MRPL38P35996 138 aaPredicted RBP3.79□□□□□ -1.8
CDC28YBR160W CTR2P38865 189 aa3.79□□□□□ -1.8
CDC28YBR160W VTC1P40046 129 aaRIP-Chip data3.79□□□□□ -1.8not detected
CDC28YBR160W YGR219WP53307 113 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms