RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 WDR5BQ86VZ2 330 aa18.47■□□□□ 0.55
PDCD2-207ENST00000539212 SYNPOQ8N3V7 929 aa18.47■□□□□ 0.55
PDCD2-207ENST00000539212 ARL14EPQ8N8R7 260 aaPredicted RBP18.47■□□□□ 0.55
PDCD2-207ENST00000539212 EZH1Q92800 747 aaPredicted RBP18.47■□□□□ 0.55
PDCD2-207ENST00000539212 MYRFLQ96LU7 910 aa18.47■□□□□ 0.55
PDCD2-207ENST00000539212 MRPL45Q9BRJ2 306 aaKnown RBP18.47■□□□□ 0.55
PDCD2-207ENST00000539212 ZMYM5Q9UJ78 669 aa18.47■□□□□ 0.55
PDCD2-207ENST00000539212 SPTBN2O15020 2390 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 TRAV19A0A0A6YYK7 116 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 ZNF233A6NK53 670 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 CLIC2O15247 247 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 TGFB1I1O43294 461 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 BDNFP23560 247 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 GALK1P51570 392 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 CYP2J2P51589 502 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 FAM160A1Q05DH4 1040 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 GRSF1Q12849 480 aaKnown RBP eCLIP18.46■□□□□ 0.55
PDCD2-207ENST00000539212 MYO1EQ12965 1108 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 PRR23CQ6ZRP0 262 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 NELFCDQ8IXH7 590 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 HHIPQ96QV1 700 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 BLZF1Q9H2G9 400 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 ECT2Q9H8V3 914 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 AGPAT3Q9NRZ7 376 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 DUS2Q9NX74 493 aaKnown RBP18.46■□□□□ 0.55
PDCD2-207ENST00000539212 GCNT4Q9P109 453 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 UXTQ9UBK9 157 aaPredicted RBP18.46■□□□□ 0.55
PDCD2-207ENST00000539212 MYOFQ9NZM1 2061 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 SDK1Q7Z5N4 2213 aa18.46■□□□□ 0.55
PDCD2-207ENST00000539212 LAMA1P25391 3075 aa18.46■□□□□ 0.54
PDCD2-207ENST00000539212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.45■□□□□ 0.54
PDCD2-207ENST00000539212 ANTXRLA6NF34 631 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 USP17L7P0C7H9 530 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 DLATP10515 647 aaKnown RBP18.45■□□□□ 0.54
PDCD2-207ENST00000539212 CNR2P34972 360 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 CACNA2D1P54289 1103 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 ZXDBP98169 803 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 PDGFRLQ15198 375 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 DUOXA2Q1HG44 320 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 MDH1BQ5I0G3 518 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 FAM26FQ5R3K3 315 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 TRAPPC11Q7Z392 1133 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 WDR49Q8IV35 697 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 SPATA18Q8TC71 538 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 SH3RF2Q8TEC5 729 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 OSCP1Q8WVF1 389 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 FUBP3Q96I24 572 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDCD2-207ENST00000539212 MMS19Q96T76 1030 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 P2RY13Q9BPV8 354 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 RTKNQ9BST9 563 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 DPEP3Q9H4B8 488 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 MAGEC2Q9UBF1 373 aaPredicted RBP18.45■□□□□ 0.54
PDCD2-207ENST00000539212 CDH9Q9ULB4 789 aa18.45■□□□□ 0.54
PDCD2-207ENST00000539212 R3HCC1Q9Y3T6 440 aaKnown RBP18.45■□□□□ 0.54
PDCD2-207ENST00000539212 SOBPA7XYQ1 873 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 SCAMP3O14828 347 aaKnown RBP18.44■□□□□ 0.54
PDCD2-207ENST00000539212 KIAA0391O15091 583 aaKnown RBP18.44■□□□□ 0.54
PDCD2-207ENST00000539212 AXIN1O15169 862 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 EIF3DO15371 548 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDCD2-207ENST00000539212 PPP6R2O75170 966 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 CST3P01034 146 aaPredicted RBP18.44■□□□□ 0.54
PDCD2-207ENST00000539212 WARSP23381 471 aaKnown RBP18.44■□□□□ 0.54
PDCD2-207ENST00000539212 HOXA6P31267 233 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 MAGEA11P43364 429 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 IFNAR2P48551 515 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 CSRP2Q16527 193 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 SNRNP35Q16560 246 aaKnown RBP18.44■□□□□ 0.54
PDCD2-207ENST00000539212 EML3Q32P44 896 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 C4orf50Q6ZRC1 276 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 STXBP4Q6ZWJ1 553 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 KBTBD6Q86V97 674 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 CPA6Q8N4T0 437 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 RPLP0P6Q8NHW5 317 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 ZNF507Q8TCN5 953 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 SCFD1Q8WVM8 642 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 CCDC127Q96BQ5 260 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 PCED1BQ96HM7 432 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 BACH2Q9BYV9 841 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
PDCD2-207ENST00000539212 LINC00597Q9H2U6 94 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 TMEM30AQ9NV96 361 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 SLC8A2Q9UPR5 921 aa18.44■□□□□ 0.54
PDCD2-207ENST00000539212 MYH10P35580 1976 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 CUTAO60888 179 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 RPP40O75818 363 aaKnown RBP18.43■□□□□ 0.54
PDCD2-207ENST00000539212 SDHBP21912 280 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 GRIK1P39086 918 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 KCNB1Q14721 858 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 SF3A2Q15428 464 aaKnown RBP18.43■□□□□ 0.54
PDCD2-207ENST00000539212 SURF1Q15526 300 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 DPH6Q7L8W6 267 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 GRAMD1CQ8IYS0 662 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 NETO1Q8TDF5 533 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 GAB3Q8WWW8 586 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 ELMO3Q96BJ8 720 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 ZNF396Q96N95 335 aaPredicted RBP18.43■□□□□ 0.54
PDCD2-207ENST00000539212 CGRRF1Q99675 332 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 ARRDC1-AS1Q9H2J1 176 aa18.43■□□□□ 0.54
PDCD2-207ENST00000539212 SMOC1Q9H4F8 434 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms