RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NOS1P29475 1434 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 DCCP43146 1447 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 SOAT2O75908 522 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 RHOP08100 348 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 TYRP14679 529 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 WT1P19544 449 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 ITGALP20701 1170 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 IBSPP21815 317 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 USP37Q86T82 979 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 CHMP4CQ96CF2 233 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 HAPLN3Q96S86 360 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 TINAGL1Q9GZM7 467 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 KMT5AQ9NQR1 393 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 PNPOQ9NVS9 261 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 FRMD4BQ9Y2L6 1034 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 PCDHA1Q9Y5I3 950 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 RAD54BQ9Y620 910 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 LMTK2Q8IWU2 1503 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 RIMS2Q9UQ26 1411 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 AHSGP02765 367 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 GNAI2P04899 355 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 NR2F6P10588 404 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 LMO1P25800 156 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 PGS1Q32NB8 556 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 CCDC157Q569K6 752 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 RBM20Q5T481 1227 aaKnown RBP6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 PPP1R3BQ86XI6 285 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 DDX17Q92841 729 aaKnown RBP6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 SARAFQ96BY9 339 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 FAM167AQ96KS9 214 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 ACTRT3Q9BYD9 372 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 GTPBP4Q9BZE4 634 aaKnown RBP6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P5-201ENST00000428894 ZFYVE9O95405 1425 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 RPRD2Q5VT52 1461 aaKnown RBP6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 M0QYG6 137 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 TTLL1O95922 423 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 AKAP5P24588 427 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 GCLCP48506 637 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 TOB1P50616 345 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 SOX10P56693 466 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 TCF15Q12870 199 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 FAM153CQ494X1 144 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 ZNF788Q6ZQV5 615 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 PPP1R32Q7Z5V6 425 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 RASAL3Q86YV0 1011 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 MVB12AQ96EY5 273 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 PBKQ96KB5 322 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 AASDHPPTQ9NRN7 309 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 IP6K2Q9UHH9 426 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 SETBP1Q9Y6X0 1596 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 MYO5BQ9ULV0 1848 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 PNPLA6Q8IY17 1366 aa6.18□□□□□ -1.42
HMGB3P5-201ENST00000428894 NHSL1Q5SYE7 1610 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 ASXL1Q8IXJ9 1541 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 H3BUI4 141 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 URI1O94763 535 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 VCAM1P19320 739 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 CD6P30203 668 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 NEK2P51955 445 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 AMIGO2Q86SJ2 522 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 FAM46DQ8NEK8 389 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 RFKQ969G6 155 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 FKBP10Q96AY3 582 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 FAM136AQ96C01 138 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 GPATCH3Q96I76 525 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 ALG8Q9BVK2 526 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 EHD3Q9NZN3 535 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 NOP58Q9Y2X3 529 aaKnown RBP6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 WNT6Q9Y6F9 365 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 ANKRD30AQ9BXX3 1397 aa6.17□□□□□ -1.42
HMGB3P5-201ENST00000428894 PTCH1Q13635 1447 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 TRPM2O94759 1503 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 CDK4P11802 303 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 ITPKBP27987 946 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 PROK1P58294 105 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 EXOSC10Q01780 885 aaKnown RBP6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 BOP1Q14137 746 aaKnown RBP6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 PLS1Q14651 629 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 TBCCQ15814 346 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 FAM160B1Q5W0V3 765 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 CAMKK1Q8N5S9 505 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 HOOK2Q96ED9 719 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 TCF7L1Q9HCS4 588 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 DKK3Q9UBP4 350 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 BLMP54132 1417 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 ADAMTS13Q76LX8 1427 aa6.16□□□□□ -1.42
HMGB3P5-201ENST00000428894 TMEM131LA2VDJ0 1609 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 GCC2Q8IWJ2 1684 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 ANKRD62A6NC57 917 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 GCOM1H8Y6P7 765 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 PF4V1P10720 104 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 ZFXP17010 805 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 HDCP19113 662 aa6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 EXOSC9Q06265 439 aaKnown RBP6.15□□□□□ -1.42
HMGB3P5-201ENST00000428894 FOXF2Q12947 444 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms