RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 CST3P01034 146 aaPredicted RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 USP17L7P0C7H9 530 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 WEE1P30291 646 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 IFNAR2P48551 515 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 FOXK2Q01167 660 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 AMPD2Q01433 879 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 CYP24A1Q07973 514 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 PSMD2Q13200 908 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 MAPRE1Q15691 268 aaKnown RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 RSPO4Q2I0M5 234 aaPredicted RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 WDR72Q3MJ13 1102 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 CFAP221Q4G0U5 840 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 ARL14EPQ8N8R7 260 aaPredicted RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 KBTBD7Q8WVZ9 684 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 FUBP3Q96I24 572 aaKnown RBP eCLIP12.85□□□□□ -0.35
TTC3-208ENST00000428693 MRPL45Q9BRJ2 306 aaKnown RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 KIF9Q9HAQ2 790 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 CRTAC1Q9NQ79 661 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 EXOC1Q9NV70 894 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 DUS2Q9NX74 493 aaKnown RBP12.85□□□□□ -0.35
TTC3-208ENST00000428693 UBE4BO95155 1302 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 C2orf78A6NCI8 922 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 A8MXQ7 604 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 HDCP19113 662 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 WARSP23381 471 aaKnown RBP12.84□□□□□ -0.35
TTC3-208ENST00000428693 PXNP49023 591 aaPredicted RBP12.84□□□□□ -0.35
TTC3-208ENST00000428693 CASP4P49662 377 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 MYL6P60660 151 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 SPEM2Q0P670 501 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 MTF1Q14872 753 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 PSMD6Q15008 389 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 PDGFRLQ15198 375 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 KNOP1Q1ED39 458 aaKnown RBP12.84□□□□□ -0.35
TTC3-208ENST00000428693 FAM171BQ6P995 826 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 ERMP1Q7Z2K6 904 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.84□□□□□ -0.35
TTC3-208ENST00000428693 CPA6Q8N4T0 437 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 NELL1Q92832 810 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 TRMT2BQ96GJ1 504 aaKnown RBP12.84□□□□□ -0.35
TTC3-208ENST00000428693 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 PKMYT1Q99640 499 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 FAM83CQ9BQN1 747 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 MED10Q9BTT4 135 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 HPS4Q9NQG7 708 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 SLC8A2Q9UPR5 921 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 WNT6Q9Y6F9 365 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 CEP250Q9BV73 2442 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 DENND4CQ5VZ89 1909 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
TTC3-208ENST00000428693 A0A1B0GVL5 298 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 PVALEFA0A1B0GWK0 134 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
TTC3-208ENST00000428693 F8VP50 259 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 TRIM66O15016 1216 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 TADA3O75528 432 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 TDGF1P13385 188 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 HOXC13P31276 330 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 MAGEA11P43364 429 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 FAM160A1Q05DH4 1040 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 CCINQ13939 588 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 PUM1Q14671 1186 aaKnown RBP eCLIP12.83□□□□□ -0.36
TTC3-208ENST00000428693 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 ATL3Q6DD88 541 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 VSTM1Q6UX27 236 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 DENND5BQ6ZUT9 1274 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 LONP2Q86WA8 852 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
TTC3-208ENST00000428693 RIN3Q8TB24 985 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 SH3RF2Q8TEC5 729 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
TTC3-208ENST00000428693 EXOC4Q96A65 974 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 DPEP3Q9H4B8 488 aa12.83□□□□□ -0.36
TTC3-208ENST00000428693 OBSL1O75147 1896 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 CLDN5O00501 218 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 HRO43593 1189 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 RNF40O75150 1001 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 EGFP01133 1207 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 SLFN14P0C7P3 912 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 PTPN1P18031 435 aaKnown RBP12.82□□□□□ -0.36
TTC3-208ENST00000428693 RAP1GAPP47736 663 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 GALK1P51570 392 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 USP46P62068 366 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 SNRPFP62306 86 aaKnown RBP12.82□□□□□ -0.36
TTC3-208ENST00000428693 NR1H3Q13133 447 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 ZNF268Q14587 947 aaPredicted RBP12.82□□□□□ -0.36
TTC3-208ENST00000428693 ZNF699Q32M78 642 aa12.82□□□□□ -0.36
TTC3-208ENST00000428693 TDRD10Q5VZ19 366 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms