RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TDP1Q9NUW8 608 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 SPATA6Q9NWH7 488 aaPredicted RBP15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 MTF2Q9Y483 593 aaPredicted RBP15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 ZFHX2Q9C0A1 2572 aaPredicted RBP15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 SLC38A8A6NNN8 435 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 NRG2O14511 850 aaPredicted RBP15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 NR3C1P04150 777 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 SP9P0CG40 484 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 TRIM21P19474 475 aaKnown RBP15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 CD72P21854 359 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 ANXA13P27216 316 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 KPNA1P52294 538 aaPredicted RBP15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 NRLP54845 237 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 DPYDQ12882 1025 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 FZD5Q13467 585 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 DDR2Q16832 855 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 DGKKQ5KSL6 1271 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 TMEM150AQ86TG1 271 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 ZNF687Q8N1G0 1237 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 OR6B3Q8NGW1 331 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 TNIP3Q96KP6 325 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 C8orf48Q96LL4 319 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 DNAI2Q9GZS0 605 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 XYLT2Q9H1B5 865 aa15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 MAGED2Q9UNF1 606 aaPredicted RBP15.52■□□□□ 0.08
NIF3L1-205ENST00000409588 PRR23AA6NEV1 266 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 C4BPAP04003 597 aaKnown RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 PDGFRBP09619 1106 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 PTPN1P18031 435 aaKnown RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 TARSP26639 723 aaKnown RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 GRIK1P39086 918 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 MCCD1P59942 119 aaPredicted RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 MYL6P60660 151 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 NOP14P78316 857 aaKnown RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 BIRC3Q13489 604 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 NCOA4Q13772 614 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 LRRC32Q14392 662 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 ZNF667Q5HYK9 610 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 STXBP5Q5T5C0 1151 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 SCARA3Q6AZY7 606 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 CC2D1AQ6P1N0 951 aaPredicted RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 DENND5BQ6ZUT9 1274 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 INTS8Q75QN2 995 aaKnown RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 FRMD5Q7Z6J6 570 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 MAB21L3Q8N8X9 362 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 ELOVL4Q9GZR5 314 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 CRTAC1Q9NQ79 661 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 RMND1Q9NWS8 449 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 HOOK1Q9UJC3 728 aaKnown RBP15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 USP34Q70CQ2 3546 aa15.51■□□□□ 0.07
NIF3L1-205ENST00000409588 SHISA7A6NL88 538 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 LRRIQ3A6PVS8 624 aaPredicted RBP15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 A8MXQ7 604 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 LMNAP02545 664 aaKnown RBP15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 USP17L7P0C7H9 530 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 CYP4F8P98187 520 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 CYP27A1Q02318 531 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 ZNF699Q32M78 642 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 ITPRIPL2Q3MIP1 535 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 ZACNQ401N2 412 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 SCN4BQ8IWT1 228 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 EFCAB3Q8N7B9 438 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 RSPRY1Q96DX4 576 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 PCED1BQ96HM7 432 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 FAXDC2Q96IV6 333 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 LRRC3BQ96PB8 259 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 FAM83CQ9BQN1 747 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 CHRDQ9H2X0 955 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 LMAN1LQ9HAT1 526 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 NXF1Q9UBU9 619 aaKnown RBP15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 PCDHGA2Q9Y5H1 932 aa15.5■□□□□ 0.07
NIF3L1-205ENST00000409588 ATP8B3O60423 1300 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 TRAV19A0A0A6YYK7 116 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 ATP2C2O75185 946 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 KRT13P13646 458 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 TCF3P15923 654 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 BDNFP23560 247 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 CCNE1P24864 410 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 GTF2H1P32780 548 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 PSMC2P35998 433 aaKnown RBP15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 CCR3P51677 355 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 FAM160A1Q05DH4 1040 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 ADAM9Q13443 819 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 PDGFRLQ15198 375 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 EDRF1Q3B7T1 1238 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 TDRD10Q5VZ19 366 aaKnown RBP15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 TXNDC8Q6A555 127 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 UNC93AQ86WB7 457 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 ELOA2Q8IYF1 753 aaPredicted RBP15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 MAML2Q8IZL2 1156 aaPredicted RBP15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 B3GALNT2Q8NCR0 500 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 ATRIPQ8WXE1 791 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 NELL1Q92832 810 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 USP13Q92995 863 aaPredicted RBP15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 MYLPFQ96A32 169 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 FAM84AQ96KN4 292 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 TIGD1Q96MW7 591 aa15.49■□□□□ 0.07
NIF3L1-205ENST00000409588 GSDMAQ96QA5 445 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms