RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C DAD1Q12248 94 aa6.47□□□□□ -1.37
SRP54YPR088C FZF1P32805 299 aa6.47□□□□□ -1.37
SRP54YPR088C YKL069WP36088 180 aa6.47□□□□□ -1.37
SRP54YPR088C YMR141CP40211 102 aa6.47□□□□□ -1.37
SRP54YPR088C MIX23P38162 196 aa6.46□□□□□ -1.38
SRP54YPR088C YFR045WP43617 309 aa6.46□□□□□ -1.38
SRP54YPR088C RRG8Q06109 277 aa6.46□□□□□ -1.38
SRP54YPR088C YGR035W-AQ45U48 73 aa6.46□□□□□ -1.38
SRP54YPR088C YHR212W-AP0CX91 67 aa6.45□□□□□ -1.38
SRP54YPR088C CUP2P15315 225 aa6.45□□□□□ -1.38
SRP54YPR088C DUT1P33317 147 aa6.45□□□□□ -1.38
SRP54YPR088C MST28P39552 234 aa6.45□□□□□ -1.38
SRP54YPR088C MST27P53176 234 aa6.45□□□□□ -1.38
SRP54YPR088C YGR025WP53216 100 aa6.45□□□□□ -1.38
SRP54YPR088C UTP23Q12339 254 aaKnown RBP6.45□□□□□ -1.38
SRP54YPR088C MRPL31P14063 131 aaPredicted RBP6.44□□□□□ -1.38
SRP54YPR088C YLR342W-AQ3E810 57 aa6.44□□□□□ -1.38
SRP54YPR088C YKL102CP34249 101 aa6.43□□□□□ -1.38
SRP54YPR088C PAM17P36147 197 aa6.43□□□□□ -1.38
SRP54YPR088C PRE5P40302 234 aaKnown RBP6.43□□□□□ -1.38
SRP54YPR088C MRPL49P40858 161 aaPredicted RBP6.43□□□□□ -1.38
SRP54YPR088C TDA4P47153 279 aa6.43□□□□□ -1.38
SRP54YPR088C YIP3P53633 176 aa6.43□□□□□ -1.38
SRP54YPR088C YNL146C-AQ3E7Z1 64 aa6.43□□□□□ -1.38
SRP54YPR088C CPT1P17898 393 aa6.43□□□□□ -1.38
SRP54YPR088C UTR5P32630 166 aa6.43□□□□□ -1.38
SRP54YPR088C ARL3Q02804 198 aa6.43□□□□□ -1.38
SRP54YPR088C YPL162CQ12042 273 aa6.43□□□□□ -1.38
SRP54YPR088C YOR011W-AQ3E807 68 aa6.43□□□□□ -1.38
SRP54YPR088C SOH1P38633 127 aa6.42□□□□□ -1.38
SRP54YPR088C SPI1P40092 148 aa6.42□□□□□ -1.38
SRP54YPR088C UPS3Q04006 179 aa6.42□□□□□ -1.38
SRP54YPR088C PRM7Q12459 698 aa6.42□□□□□ -1.38
SRP54YPR088C CMC2Q3E7A4 109 aa6.42□□□□□ -1.38
SRP54YPR088C POR1P04840 283 aaKnown RBP6.41□□□□□ -1.38
SRP54YPR088C RPB11P38902 120 aa6.41□□□□□ -1.38
SRP54YPR088C ATG33Q06485 197 aa6.41□□□□□ -1.38
SRP54YPR088C RPL12AP0CX53 165 aaKnown RBP6.4□□□□□ -1.38
SRP54YPR088C RPL12BP0CX54 165 aa6.4□□□□□ -1.38
SRP54YPR088C MSN1P22148 382 aa6.4□□□□□ -1.38
SRP54YPR088C YBR144CP34215 104 aa6.4□□□□□ -1.38
SRP54YPR088C SIM1P40472 476 aa6.4□□□□□ -1.38
SRP54YPR088C AGE2P40529 298 aa6.4□□□□□ -1.38
SRP54YPR088C YGR149WP48236 432 aa6.4□□□□□ -1.38
SRP54YPR088C CSM4Q08955 156 aa6.4□□□□□ -1.38
SRP54YPR088C CCW12Q12127 133 aa6.4□□□□□ -1.38
SRP54YPR088C RPS22BQ3E7Y3 130 aaKnown RBP6.4□□□□□ -1.38
SRP54YPR088C TAR1Q8TGM6 124 aa6.4□□□□□ -1.38
SRP54YPR088C TY1A-HP0C2I4 478 aaKnown RBP6.39□□□□□ -1.39
SRP54YPR088C MRPL28P36527 147 aa6.39□□□□□ -1.39
SRP54YPR088C MPC2P38857 129 aa6.39□□□□□ -1.39
SRP54YPR088C PAU7P39545 55 aa6.39□□□□□ -1.39
SRP54YPR088C COX16P47081 118 aa6.39□□□□□ -1.39
SRP54YPR088C YJR096WP47137 282 aa6.39□□□□□ -1.39
SRP54YPR088C CYT2Q00873 224 aa6.39□□□□□ -1.39
SRP54YPR088C YPR063CQ12160 140 aa6.39□□□□□ -1.39
SRP54YPR088C YDR215CQ12240 137 aa6.39□□□□□ -1.39
SRP54YPR088C YHR022CP38763 256 aa6.39□□□□□ -1.39
SRP54YPR088C UTP20P35194 2493 aaKnown RBP6.38□□□□□ -1.39
SRP54YPR088C RTG1P32607 177 aa6.38□□□□□ -1.39
SRP54YPR088C YER135CP40082 130 aa6.38□□□□□ -1.39
SRP54YPR088C ALG13P53178 202 aa6.38□□□□□ -1.39
SRP54YPR088C DXO1Q06349 442 aa6.38□□□□□ -1.39
SRP54YPR088C MED7Q08278 222 aa6.38□□□□□ -1.39
SRP54YPR088C POM33Q12164 279 aa6.38□□□□□ -1.39
SRP54YPR088C TIM22Q12328 207 aa6.38□□□□□ -1.39
SRP54YPR088C YCR024C-BQ3E7Z8 88 aa6.38□□□□□ -1.39
SRP54YPR088C MDM10P18409 493 aa6.37□□□□□ -1.39
SRP54YPR088C ECM33P38248 429 aaKnown RBP6.37□□□□□ -1.39
SRP54YPR088C SDS23P53172 527 aa6.37□□□□□ -1.39
SRP54YPR088C YMR244WQ04018 355 aa6.37□□□□□ -1.39
SRP54YPR088C ARC18Q05933 178 aaKnown RBP6.37□□□□□ -1.39
SRP54YPR088C SSS1P35179 80 aa6.36□□□□□ -1.39
SRP54YPR088C MIC26P50087 233 aa6.36□□□□□ -1.39
SRP54YPR088C THG1P53215 237 aaKnown RBP6.36□□□□□ -1.39
SRP54YPR088C VMA16P23968 213 aa6.36□□□□□ -1.39
SRP54YPR088C DIA1P54005 336 aa6.36□□□□□ -1.39
SRP54YPR088C CUE4Q04201 117 aaPredicted RBP6.36□□□□□ -1.39
SRP54YPR088C GTO3Q04806 366 aa6.36□□□□□ -1.39
SRP54YPR088C RPL27AP0C2H6 136 aaKnown RBP6.35□□□□□ -1.39
SRP54YPR088C RPL23AP0CX41 137 aaKnown RBP6.35□□□□□ -1.39
SRP54YPR088C RPL23BP0CX42 137 aaKnown RBP6.35□□□□□ -1.39
SRP54YPR088C MRPS8Q03799 155 aa6.35□□□□□ -1.39
SRP54YPR088C SEC4P07560 215 aaKnown RBP6.34□□□□□ -1.39
SRP54YPR088C ZRT1P32804 376 aa6.34□□□□□ -1.39
SRP54YPR088C SDH8P38345 138 aa6.34□□□□□ -1.39
SRP54YPR088C YHR140WP38842 239 aa6.34□□□□□ -1.39
SRP54YPR088C MIG3P39943 394 aa6.34□□□□□ -1.39
SRP54YPR088C GPI19Q04082 140 aa6.34□□□□□ -1.39
SRP54YPR088C FSF1Q12029 327 aaKnown RBP6.34□□□□□ -1.39
SRP54YPR088C YOL085CQ99345 113 aa6.34□□□□□ -1.39
SRP54YPR088C VAR1P02381 398 aa6.33□□□□□ -1.4
SRP54YPR088C KEG1P43614 200 aa6.33□□□□□ -1.4
SRP54YPR088C YGR017WP53210 297 aa6.33□□□□□ -1.4
SRP54YPR088C MIG1P27705 504 aa6.32□□□□□ -1.4
SRP54YPR088C AGA1P32323 725 aa6.32□□□□□ -1.4
SRP54YPR088C YDR274CP87283 123 aa6.32□□□□□ -1.4
SRP54YPR088C WIP1Q2V2P8 89 aa6.32□□□□□ -1.4
SRP54YPR088C FRS1P15624 595 aaKnown RBP6.31□□□□□ -1.4
SRP54YPR088C OST3P48439 350 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms