RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W WIP1Q2V2P8 89 aa1.95□□□□□ -2.1
HSH49YOR319W MHF1Q3E835 90 aa1.95□□□□□ -2.1
HSH49YOR319W QCR10P37299 77 aa1.94□□□□□ -2.1
HSH49YOR319W SAE3P89114 91 aa1.94□□□□□ -2.1
HSH49YOR319W ATG8P38182 117 aaRIP-Chip data1.93□□□□□ -2.1not detected
HSH49YOR319W YBR027CP38220 110 aa1.93□□□□□ -2.1
HSH49YOR319W MPC1P53157 130 aaKnown RBP1.93□□□□□ -2.1
HSH49YOR319W ECM5Q03214 1411 aa1.92□□□□□ -2.1
HSH49YOR319W YHL037CP38733 133 aa1.92□□□□□ -2.1
HSH49YOR319W DCV1P43595 202 aa1.92□□□□□ -2.1
HSH49YOR319W YGL149WP53116 101 aa1.92□□□□□ -2.1
HSH49YOR319W YPL067CQ02754 198 aa1.92□□□□□ -2.1
HSH49YOR319W YLR099W-AQ3E798 87 aa1.92□□□□□ -2.1
HSH49YOR319W CDC39P25655 2108 aaKnown RBP1.91□□□□□ -2.1
HSH49YOR319W RPO41P13433 1351 aaKnown RBP1.91□□□□□ -2.1
HSH49YOR319W FUN14P18411 198 aa1.91□□□□□ -2.1
HSH49YOR319W SFT2P38166 215 aa1.91□□□□□ -2.1
HSH49YOR319W YFL051CP43552 160 aa1.91□□□□□ -2.1
HSH49YOR319W AIM11P87275 137 aa1.91□□□□□ -2.1
HSH49YOR319W YLR118CQ12354 227 aa1.91□□□□□ -2.1
HSH49YOR319W RPL33AP05744 107 aaKnown RBP1.9□□□□□ -2.11
HSH49YOR319W SED1Q01589 338 aa1.9□□□□□ -2.11
HSH49YOR319W SPC24Q04477 213 aa1.9□□□□□ -2.11
HSH49YOR319W HSL1P34244 1518 aa1.9□□□□□ -2.11
HSH49YOR319W HSP10P38910 106 aa1.89□□□□□ -2.11
HSH49YOR319W GAT4P40569 121 aa1.89□□□□□ -2.11
HSH49YOR319W BRP1P53194 125 aa1.89□□□□□ -2.11
HSH49YOR319W APS2Q00381 147 aa1.89□□□□□ -2.11
HSH49YOR319W SEN15Q04675 128 aa1.89□□□□□ -2.11
HSH49YOR319W PAU21P0CE86 164 aa1.88□□□□□ -2.11
HSH49YOR319W PAU22P0CE87 164 aa1.88□□□□□ -2.11
HSH49YOR319W HAP3P13434 144 aa1.88□□□□□ -2.11
HSH49YOR319W NMT1P14743 455 aa1.88□□□□□ -2.11
HSH49YOR319W YGL014C-AP0C5N1 53 aa1.87□□□□□ -2.11
HSH49YOR319W ANB1P19211 157 aa1.87□□□□□ -2.11
HSH49YOR319W ERV14P53173 138 aa1.87□□□□□ -2.11
HSH49YOR319W YMR007WQ03675 126 aa1.87□□□□□ -2.11
HSH49YOR319W SRL3P36167 246 aa1.86□□□□□ -2.11
HSH49YOR319W RPL40AP0CH08 128 aaKnown RBP1.85□□□□□ -2.11
HSH49YOR319W RPL40BP0CH09 128 aaKnown RBP1.85□□□□□ -2.11
HSH49YOR319W UTP11P34247 250 aaPredicted RBP1.85□□□□□ -2.11
HSH49YOR319W MRPL11P36521 249 aaPredicted RBP1.85□□□□□ -2.11
HSH49YOR319W YAR064WP39563 99 aa1.85□□□□□ -2.11
HSH49YOR319W AIM36Q03798 255 aa1.85□□□□□ -2.11
HSH49YOR319W KTI11Q3E840 82 aa1.85□□□□□ -2.11
HSH49YOR319W YHR213WP0CI67 198 aa1.84□□□□□ -2.11
HSH49YOR319W SEC59P20048 519 aa1.84□□□□□ -2.11
HSH49YOR319W UGX2P32772 223 aa1.84□□□□□ -2.11
HSH49YOR319W RPB11P38902 120 aa1.84□□□□□ -2.11
HSH49YOR319W GTT2Q12390 233 aa1.84□□□□□ -2.11
HSH49YOR319W YIR021W-AQ3E739 70 aa1.84□□□□□ -2.11
HSH49YOR319W YOR376W-AQ3E805 51 aa1.84□□□□□ -2.11
HSH49YOR319W GSC2P40989 1895 aa1.84□□□□□ -2.12
HSH49YOR319W TRM732Q03496 1420 aa1.83□□□□□ -2.12
HSH49YOR319W YKL044WP36092 106 aa1.83□□□□□ -2.12
HSH49YOR319W YMR122CQ03879 124 aa1.83□□□□□ -2.12
HSH49YOR319W YLR296WQ05898 108 aa1.83□□□□□ -2.12
HSH49YOR319W FCF2Q12035 217 aaPredicted RBP1.83□□□□□ -2.12
HSH49YOR319W CCW12Q12127 133 aa1.83□□□□□ -2.12
HSH49YOR319W YIL102CP40488 101 aa1.82□□□□□ -2.12
HSH49YOR319W LST8P41318 303 aa1.82□□□□□ -2.12
HSH49YOR319W IRC21Q04772 201 aa1.82□□□□□ -2.12
HSH49YOR319W YOR304C-AO14468 76 aa1.81□□□□□ -2.12
HSH49YOR319W ADK1P07170 222 aaKnown RBP1.81□□□□□ -2.12
HSH49YOR319W LDB18Q07887 179 aa1.81□□□□□ -2.12
HSH49YOR319W PRM3Q08931 133 aa1.81□□□□□ -2.12
HSH49YOR319W SNT2P53127 1403 aa1.81□□□□□ -2.12
HSH49YOR319W SLH1P53327 1967 aaKnown RBP1.8□□□□□ -2.12
HSH49YOR319W HAP2P06774 265 aa1.8□□□□□ -2.12
HSH49YOR319W PFY1P07274 126 aa1.8□□□□□ -2.12
HSH49YOR319W SNF11P38956 169 aa1.8□□□□□ -2.12
HSH49YOR319W GPI19Q04082 140 aa1.8□□□□□ -2.12
HSH49YOR319W RPL36BO14455 100 aaKnown RBP1.79□□□□□ -2.12
HSH49YOR319W RTC6O14464 93 aa1.79□□□□□ -2.12
HSH49YOR319W RPL36AP05745 100 aaPredicted RBP1.79□□□□□ -2.12
HSH49YOR319W AIM18P38884 321 aa1.79□□□□□ -2.12
HSH49YOR319W TDA2P40045 126 aa1.79□□□□□ -2.12
HSH49YOR319W ARL3Q02804 198 aa1.79□□□□□ -2.12
HSH49YOR319W LCL2Q08045 131 aa1.79□□□□□ -2.12
HSH49YOR319W YOR072WQ08486 104 aa1.79□□□□□ -2.12
HSH49YOR319W GSP1P32835 219 aaKnown RBP1.78□□□□□ -2.12
HSH49YOR319W YAR029WP39549 74 aa1.78□□□□□ -2.12
HSH49YOR319W HUA1P40325 198 aa1.78□□□□□ -2.12
HSH49YOR319W YNL122CP53921 115 aaPredicted RBP1.78□□□□□ -2.12
HSH49YOR319W RUB1Q03919 77 aa1.78□□□□□ -2.12
HSH49YOR319W COA4Q05809 96 aa1.78□□□□□ -2.12
HSH49YOR319W YLR042CQ07990 161 aa1.78□□□□□ -2.12
HSH49YOR319W MDS3P53094 1487 aa1.77□□□□□ -2.13
HSH49YOR319W SPP41P38904 1435 aa1.77□□□□□ -2.13
HSH49YOR319W YOL013W-AP0C272 63 aaPredicted RBP1.77□□□□□ -2.13
HSH49YOR319W YCR001WP25347 104 aa1.77□□□□□ -2.13
HSH49YOR319W YJL009WP47078 108 aa1.77□□□□□ -2.13
HSH49YOR319W HPA2Q06592 156 aa1.77□□□□□ -2.13
HSH49YOR319W YOR097CQ12274 175 aaPredicted RBP1.77□□□□□ -2.13
HSH49YOR319W RTR2Q12378 196 aa1.77□□□□□ -2.13
HSH49YOR319W AIM4P38305 123 aaPredicted RBP1.76□□□□□ -2.13
HSH49YOR319W MED11Q99278 115 aa1.76□□□□□ -2.13
HSH49YOR319W YCR099CP25657 155 aa1.75□□□□□ -2.13
HSH49YOR319W YFR035CP43608 114 aa1.75□□□□□ -2.13
HSH49YOR319W RPS22AP0C0W1 130 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms