RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	ANT1	Q06497	328 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	SUS1	Q6WNK7	96 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	YLR422W	Q06409	1932 aa		2.64	□□□□□ -1.99
VAM10	YOR068C	SNQ2	P32568	1501 aa	Known RBP	2.63	□□□□□ -1.99
VAM10	YOR068C	YLR419W	Q06698	1435 aa	Known RBP	2.63	□□□□□ -1.99
VAM10	YOR068C	YOL162W	P0CF19	215 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	SPO73	P40031	143 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	YNL200C	P40165	246 aa	Known RBP	2.63	□□□□□ -1.99
VAM10	YOR068C	CWP2	P43497	92 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	IGD1	P43598	195 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	YFR035C	P43608	114 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	MIX14	Q04341	121 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	EMI1	Q04406	187 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	YDR115W	Q04598	105 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	PAU23	Q07987	124 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	NIP7	Q08962	181 aa	Known RBP	2.63	□□□□□ -1.99
VAM10	YOR068C	PAU17	Q12370	124 aa		2.63	□□□□□ -1.99
VAM10	YOR068C	YLR156W	P0CE96	114 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YLR159W	P0CE97	114 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YLR161W	P0CE98	114 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	KRE1	P17260	313 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	DDR48	P18899	430 aa	Known RBP	2.62	□□□□□ -1.99
VAM10	YOR068C	YCR025C	P25352	136 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	MIG1	P27705	504 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	ZRT3	P34240	503 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	MID2	P36027	376 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	GPI18	P38211	433 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	SVP26	P38869	228 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	SNF11	P38956	169 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YAR068W	P39564	161 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YEL028W	P39989	153 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YER135C	P40082	130 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	EMC5	P40540	141 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	SMD3	P43321	101 aa	Known RBP	2.62	□□□□□ -1.99
VAM10	YOR068C	PIR5	P46999	287 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YDR102C	Q03864	110 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	PIN3	Q06449	215 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	SYM1	Q06563	197 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YOL131W	Q08270	108 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	HRT1	Q08273	121 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	NAT5	Q08689	176 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	YLR365W	Q7LIF2	110 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	MIC10	Q96VH5	97 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	PDR12	Q02785	1511 aa		2.62	□□□□□ -1.99
VAM10	YOR068C	RPS25B	P0C0T4	108 aa	Known RBP	2.61	□□□□□ -1.99
VAM10	YOR068C	UTR5	P32630	166 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	MSA2	P36157	363 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	FYV4	P38783	130 aa	Predicted RBP	2.61	□□□□□ -1.99
VAM10	YOR068C	FLX1	P40464	311 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	PGU1	P47180	361 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	ATP19	P81451	68 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	RPL21A	Q02753	160 aa	Known RBP	2.61	□□□□□ -1.99
VAM10	YOR068C	MRPS8	Q03799	155 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	SEN15	Q04675	128 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	ELP6	Q04868	273 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	PCC1	Q3E833	88 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	ENV10	Q99382	181 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	USO1	P25386	1790 aa		2.61	□□□□□ -1.99
VAM10	YOR068C	RPO21	P04050	1733 aa	Known RBP	2.6	□□□□□ -1.99
VAM10	YOR068C	YAR023C	D6VPM8	179 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	YEL045C	P32616	141 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	VTC1	P40046	129 aa	RIP-Chip data	2.6	□□□□□ -1.99	not detected
VAM10	YOR068C	HYR1	P40581	163 aa	Known RBP	2.6	□□□□□ -1.99
VAM10	YOR068C	VMA21	P41806	77 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	YJL028W	P47062	111 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	DSK2	P48510	373 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	YNR064C	P53750	290 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	GRX5	Q02784	150 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	GPI19	Q04082	140 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	YOR385W	Q08909	290 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	VMA9	Q3E7B6	73 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	YOR376W-A	Q3E805	51 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	MHF1	Q3E835	90 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	ATG40	Q99325	256 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	MLP2	P40457	1679 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	UBR1	P19812	1950 aa		2.6	□□□□□ -1.99
VAM10	YOR068C	ATP15	P21306	62 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	TOM6	P33448	61 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	UMP1	P38293	148 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	ATX1	P38636	73 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	YHR138C	P38841	114 aa	Predicted RBP	2.59	□□□□□ -1.99
VAM10	YOR068C	YAL064W	P39711	94 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	TDA2	P40045	126 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	HUR1	P45820	110 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	KNH1	P50112	268 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	LIP1	Q03579	150 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	RIM9	Q04734	239 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	FYV12	Q08559	129 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	YNR034W-A	Q3E841	98 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	YIL134C-A	Q45U18	67 aa		2.59	□□□□□ -1.99
VAM10	YOR068C	MYO1	P08964	1928 aa		2.58	□□□□□ -2
VAM10	YOR068C	ECM34	P38728	170 aa		2.58	□□□□□ -2
VAM10	YOR068C	PEP8	P40335	379 aa		2.58	□□□□□ -2
VAM10	YOR068C	POP3	P53833	195 aa	Predicted RBP	2.58	□□□□□ -2
VAM10	YOR068C	CYT2	Q00873	224 aa		2.58	□□□□□ -2
VAM10	YOR068C	YDR042C	Q03205	200 aa		2.58	□□□□□ -2
VAM10	YOR068C	YMR295C	Q03559	197 aa		2.58	□□□□□ -2
VAM10	YOR068C	YHP1	Q04116	353 aa		2.58	□□□□□ -2
VAM10	YOR068C	AVO2	Q04749	426 aa		2.58	□□□□□ -2
VAM10	YOR068C	YLR296W	Q05898	108 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 103.1 ms