RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W EST3Q03096 181 aa1.89□□□□□ -2.11
TRM112YNR046W YDR102CQ03864 110 aa1.89□□□□□ -2.11
TRM112YNR046W SCP1Q08873 200 aa1.89□□□□□ -2.11
TRM112YNR046W YMR030W-AQ3E760 96 aa1.89□□□□□ -2.11
TRM112YNR046W KRE5P22023 1365 aa1.88□□□□□ -2.11
TRM112YNR046W PRE1P22141 198 aaKnown RBP1.88□□□□□ -2.11
TRM112YNR046W HYP2P23301 157 aaKnown RBP1.88□□□□□ -2.11
TRM112YNR046W MRS4P23500 304 aa1.88□□□□□ -2.11
TRM112YNR046W YBR090CP38253 122 aa1.88□□□□□ -2.11
TRM112YNR046W MPM1P40364 252 aa1.88□□□□□ -2.11
TRM112YNR046W LSM8P47093 109 aaKnown RBP1.88□□□□□ -2.11
TRM112YNR046W EMC4P53073 190 aa1.88□□□□□ -2.11
TRM112YNR046W LIP1Q03579 150 aa1.88□□□□□ -2.11
TRM112YNR046W TY1B-DR1Q03855 1755 aa1.87□□□□□ -2.11
TRM112YNR046W TY1B-DR3Q99231 1755 aa1.87□□□□□ -2.11
TRM112YNR046W DDR48P18899 430 aaKnown RBP1.87□□□□□ -2.11
TRM112YNR046W SFT2P38166 215 aa1.87□□□□□ -2.11
TRM112YNR046W YAR029WP39549 74 aa1.87□□□□□ -2.11
TRM112YNR046W CCS1P40202 249 aaKnown RBP1.87□□□□□ -2.11
TRM112YNR046W GAT4P40569 121 aa1.87□□□□□ -2.11
TRM112YNR046W GNA1P43577 159 aaPredicted RBP1.87□□□□□ -2.11
TRM112YNR046W YML079WQ03629 201 aa1.87□□□□□ -2.11
TRM112YNR046W YMR252CQ04814 134 aa1.87□□□□□ -2.11
TRM112YNR046W GTT2Q12390 233 aa1.87□□□□□ -2.11
TRM112YNR046W YGL194C-AQ2V2P6 80 aa1.87□□□□□ -2.11
TRM112YNR046W DDP1Q99321 188 aaKnown RBP1.87□□□□□ -2.11
TRM112YNR046W PDR11P40550 1411 aa1.86□□□□□ -2.11
TRM112YNR046W UBC5P15732 148 aa1.86□□□□□ -2.11
TRM112YNR046W YCR050CP25630 102 aa1.86□□□□□ -2.11
TRM112YNR046W PAM16P42949 149 aa1.86□□□□□ -2.11
TRM112YNR046W MET31Q03081 177 aa1.86□□□□□ -2.11
TRM112YNR046W ATG10Q07879 167 aa1.86□□□□□ -2.11
TRM112YNR046W UIP4Q08926 304 aa1.86□□□□□ -2.11
TRM112YNR046W YCR075W-AQ3E830 75 aa1.86□□□□□ -2.11
TRM112YNR046W YHR130CP38834 111 aa1.85□□□□□ -2.11
TRM112YNR046W SNU13P39990 126 aaKnown RBP1.85□□□□□ -2.11
TRM112YNR046W YNR064CP53750 290 aa1.85□□□□□ -2.11
TRM112YNR046W YMR103CQ04436 120 aa1.85□□□□□ -2.11
TRM112YNR046W YOR097CQ12274 175 aaPredicted RBP1.85□□□□□ -2.11
TRM112YNR046W RSF2P46974 1380 aa1.85□□□□□ -2.11
TRM112YNR046W SRL3P36167 246 aa1.84□□□□□ -2.11
TRM112YNR046W YAL064WP39711 94 aa1.84□□□□□ -2.11
TRM112YNR046W YFL065CP43539 102 aa1.84□□□□□ -2.11
TRM112YNR046W SPG1P50088 95 aa1.84□□□□□ -2.11
TRM112YNR046W KEI1Q06346 221 aa1.84□□□□□ -2.11
TRM112YNR046W RRT7Q07829 113 aa1.84□□□□□ -2.11
TRM112YNR046W YDL157CQ12082 118 aa1.84□□□□□ -2.11
TRM112YNR046W YOR376W-AQ3E805 51 aa1.84□□□□□ -2.11
TRM112YNR046W MLP1Q02455 1875 aaKnown RBP1.84□□□□□ -2.12
TRM112YNR046W TY1B-NL2Q99337 1749 aaKnown RBP1.83□□□□□ -2.12
TRM112YNR046W HAP3P13434 144 aa1.83□□□□□ -2.12
TRM112YNR046W YGR164WP53291 111 aa1.83□□□□□ -2.12
TRM112YNR046W ELP6Q04868 273 aa1.83□□□□□ -2.12
TRM112YNR046W MED11Q99278 115 aa1.83□□□□□ -2.12
TRM112YNR046W GSC2P40989 1895 aa1.83□□□□□ -2.12
TRM112YNR046W GEA2P39993 1459 aaKnown RBP1.82□□□□□ -2.12
TRM112YNR046W YCR099CP25657 155 aa1.82□□□□□ -2.12
TRM112YNR046W YEL067CP39978 195 aa1.82□□□□□ -2.12
TRM112YNR046W YGR269WP40326 108 aa1.82□□□□□ -2.12
TRM112YNR046W SCS22Q6Q595 175 aa1.82□□□□□ -2.12
TRM112YNR046W CAT8P39113 1433 aa1.82□□□□□ -2.12
TRM112YNR046W PDR10P51533 1564 aa1.81□□□□□ -2.12
TRM112YNR046W YEL008WP40001 126 aa1.81□□□□□ -2.12
TRM112YNR046W MPC1P53157 130 aaKnown RBP1.81□□□□□ -2.12
TRM112YNR046W LTE1P07866 1435 aa1.81□□□□□ -2.12
TRM112YNR046W GEA1P47102 1408 aaPredicted RBP1.81□□□□□ -2.12
TRM112YNR046W CDC39P25655 2108 aaKnown RBP1.81□□□□□ -2.12
TRM112YNR046W TY1B-GR3Q12316 1755 aa1.8□□□□□ -2.12
TRM112YNR046W TY1B-ORQ92393 1755 aa1.8□□□□□ -2.12
TRM112YNR046W FAS2P19097 1887 aaKnown RBP1.8□□□□□ -2.12
TRM112YNR046W RPS25BP0C0T4 108 aaKnown RBP1.8□□□□□ -2.12
TRM112YNR046W YFR035CP43608 114 aa1.8□□□□□ -2.12
TRM112YNR046W YMR090WQ04304 227 aaKnown RBP1.8□□□□□ -2.12
TRM112YNR046W FIT1Q04433 528 aa1.8□□□□□ -2.12
TRM112YNR046W YOR385WQ08909 290 aa1.8□□□□□ -2.12
TRM112YNR046W RPS25AQ3E792 108 aaPredicted RBP1.8□□□□□ -2.12
TRM112YNR046W COA3Q3E7B2 85 aa1.8□□□□□ -2.12
TRM112YNR046W RPA190P10964 1664 aaKnown RBP1.8□□□□□ -2.12
TRM112YNR046W UBR2Q07963 1872 aa1.8□□□□□ -2.12
TRM112YNR046W INO4P13902 151 aa1.79□□□□□ -2.12
TRM112YNR046W YCL042WP25572 119 aa1.79□□□□□ -2.12
TRM112YNR046W ECM31P38122 312 aa1.79□□□□□ -2.12
TRM112YNR046W SNF11P38956 169 aa1.79□□□□□ -2.12
TRM112YNR046W TDA2P40045 126 aa1.79□□□□□ -2.12
TRM112YNR046W ATP19P81451 68 aa1.79□□□□□ -2.12
TRM112YNR046W SWC7Q06707 132 aa1.79□□□□□ -2.12
TRM112YNR046W FIT3Q08907 204 aa1.79□□□□□ -2.12
TRM112YNR046W RPO31P04051 1460 aa1.79□□□□□ -2.12
TRM112YNR046W YRF1-2P40105 1681 aa1.79□□□□□ -2.12
TRM112YNR046W TY1B-DR5P0C2I2 1755 aa1.79□□□□□ -2.12
TRM112YNR046W TY1B-DR6P0C2I3 1755 aa1.79□□□□□ -2.12
TRM112YNR046W TY1B-LR2P0C2I5 1755 aa1.79□□□□□ -2.12
TRM112YNR046W TY1B-LR3P0C2I6 1755 aaKnown RBP1.79□□□□□ -2.12
TRM112YNR046W TY1B-PR1P0C2I9 1755 aaKnown RBP1.79□□□□□ -2.12
TRM112YNR046W TY1B-PR3P0C2J1 1755 aaKnown RBP1.79□□□□□ -2.12
TRM112YNR046W TY1B-JR1P47098 1755 aa1.79□□□□□ -2.12
TRM112YNR046W TY1B-ML2Q03434 1755 aaKnown RBP1.79□□□□□ -2.12
TRM112YNR046W TY1B-ER1Q03612 1755 aa1.79□□□□□ -2.12
TRM112YNR046W TY1B-ML1Q04711 1755 aaKnown RBP1.79□□□□□ -2.12
TRM112YNR046W TY1B-GR2Q12269 1755 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms