RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C CSR2Q12734 1121 aa2□□□□□ -2.09
SIR3YLR442C YLR363W-AQ3E747 85 aa2□□□□□ -2.09
SIR3YLR442C YBL008W-AQ3E821 79 aa2□□□□□ -2.09
SIR3YLR442C TDA8Q6B2U8 126 aa2□□□□□ -2.09
SIR3YLR442C URB1P34241 1764 aaKnown RBP2□□□□□ -2.09
SIR3YLR442C BUD3P25558 1636 aa2□□□□□ -2.09
SIR3YLR442C YCR043CP25361 127 aa2□□□□□ -2.09
SIR3YLR442C MRP17P28778 131 aa2□□□□□ -2.09
SIR3YLR442C GPI18P38211 433 aa2□□□□□ -2.09
SIR3YLR442C CSH1P38287 376 aa2□□□□□ -2.09
SIR3YLR442C YHL005CP38752 130 aa2□□□□□ -2.09
SIR3YLR442C TES1P41903 349 aaKnown RBP2□□□□□ -2.09
SIR3YLR442C SWT21P53873 357 aaPredicted RBP2□□□□□ -2.09
SIR3YLR442C ELP6Q04868 273 aa2□□□□□ -2.09
SIR3YLR442C ANT1Q06497 328 aa2□□□□□ -2.09
SIR3YLR442C YDL242WQ07746 117 aa2□□□□□ -2.09
SIR3YLR442C CSI2Q08054 341 aa2□□□□□ -2.09
SIR3YLR442C YDL157CQ12082 118 aa2□□□□□ -2.09
SIR3YLR442C YOR015WQ12169 119 aa2□□□□□ -2.09
SIR3YLR442C YDR119W-AQ2V2P9 66 aa2□□□□□ -2.09
SIR3YLR442C YMR175W-AQ3E766 64 aa2□□□□□ -2.09
SIR3YLR442C RPS25AQ3E792 108 aaPredicted RBP2□□□□□ -2.09
SIR3YLR442C SCS22Q6Q595 175 aa2□□□□□ -2.09
SIR3YLR442C NSA2P40078 261 aaKnown RBP1.99□□□□□ -2.09
SIR3YLR442C YLR296WQ05898 108 aa1.99□□□□□ -2.09
SIR3YLR442C POC4Q12245 148 aaPredicted RBP1.99□□□□□ -2.09
SIR3YLR442C ZRT3P34240 503 aa1.99□□□□□ -2.09
SIR3YLR442C SWD3P38123 315 aa1.99□□□□□ -2.09
SIR3YLR442C PEP8P40335 379 aa1.99□□□□□ -2.09
SIR3YLR442C YFR035CP43608 114 aa1.99□□□□□ -2.09
SIR3YLR442C HUR1P45820 110 aa1.99□□□□□ -2.09
SIR3YLR442C PIR5P46999 287 aa1.99□□□□□ -2.09
SIR3YLR442C VPS25P47142 202 aa1.99□□□□□ -2.09
SIR3YLR442C PGU1P47180 361 aa1.99□□□□□ -2.09
SIR3YLR442C HAL1Q01766 294 aa1.99□□□□□ -2.09
SIR3YLR442C YLR281CQ05863 155 aa1.99□□□□□ -2.09
SIR3YLR442C NMA1Q06178 401 aaKnown RBP1.99□□□□□ -2.09
SIR3YLR442C YOR186WQ08560 144 aa1.99□□□□□ -2.09
SIR3YLR442C YLR112WQ12130 139 aa1.99□□□□□ -2.09
SIR3YLR442C OM14P38325 134 aa1.98□□□□□ -2.09
SIR3YLR442C ASP1P38986 381 aaPredicted RBP1.98□□□□□ -2.09
SIR3YLR442C SPO73P40031 143 aa1.98□□□□□ -2.09
SIR3YLR442C YJL218WP40892 196 aaKnown RBP1.98□□□□□ -2.09
SIR3YLR442C DSK2P48510 373 aa1.98□□□□□ -2.09
SIR3YLR442C TOS2P50078 622 aa1.98□□□□□ -2.09
SIR3YLR442C YMR252CQ04814 134 aa1.98□□□□□ -2.09
SIR3YLR442C NCE102Q12207 173 aaRIP-Chip data1.98□□□□□ -2.09not detected
SIR3YLR442C BNI1P41832 1953 aa1.98□□□□□ -2.09
SIR3YLR442C RPL15AP05748 204 aaKnown RBP1.98□□□□□ -2.09
SIR3YLR442C YKL097CP34245 136 aa1.98□□□□□ -2.09
SIR3YLR442C YNL200CP40165 246 aaKnown RBP1.98□□□□□ -2.09
SIR3YLR442C CDC1P40986 491 aa1.98□□□□□ -2.09
SIR3YLR442C EAF6P47128 113 aa1.98□□□□□ -2.09
SIR3YLR442C RPL15BP54780 204 aaPredicted RBP1.98□□□□□ -2.09
SIR3YLR442C ATP19P81451 68 aa1.98□□□□□ -2.09
SIR3YLR442C GPI19Q04082 140 aa1.98□□□□□ -2.09
SIR3YLR442C YHP1Q04116 353 aa1.98□□□□□ -2.09
SIR3YLR442C YOL014WQ08110 124 aa1.98□□□□□ -2.09
SIR3YLR442C EMC6Q12431 108 aa1.98□□□□□ -2.09
SIR3YLR442C YPL038W-AQ3E7B4 63 aa1.98□□□□□ -2.09
SIR3YLR442C YML100W-AQ8TGT0 57 aa1.98□□□□□ -2.09
SIR3YLR442C ODC2Q99297 307 aa1.98□□□□□ -2.09
SIR3YLR442C APC1P53886 1748 aa1.97□□□□□ -2.09
SIR3YLR442C RPS8AP0CX39 200 aaKnown RBP1.97□□□□□ -2.09
SIR3YLR442C RPS8BP0CX40 200 aaKnown RBP1.97□□□□□ -2.09
SIR3YLR442C PDX3P38075 228 aaKnown RBP1.97□□□□□ -2.09
SIR3YLR442C YHL042WP38729 150 aa1.97□□□□□ -2.09
SIR3YLR442C YER134CP40081 178 aa1.97□□□□□ -2.09
SIR3YLR442C PAU5P43575 122 aa1.97□□□□□ -2.09
SIR3YLR442C MIC27P50945 234 aa1.97□□□□□ -2.09
SIR3YLR442C TDA7P53882 636 aaPredicted RBP1.97□□□□□ -2.09
SIR3YLR442C TVP15Q03860 143 aa1.97□□□□□ -2.09
SIR3YLR442C EMI1Q04406 187 aa1.97□□□□□ -2.09
SIR3YLR442C YOL159CQ08300 171 aa1.97□□□□□ -2.09
SIR3YLR442C YOR020W-AQ3E824 90 aa1.97□□□□□ -2.09
SIR3YLR442C MLP1Q02455 1875 aaKnown RBP1.97□□□□□ -2.09
SIR3YLR442C PIS1P06197 220 aaKnown RBP1.97□□□□□ -2.09
SIR3YLR442C BET1P22804 142 aa1.97□□□□□ -2.09
SIR3YLR442C IMP1P28627 190 aa1.97□□□□□ -2.09
SIR3YLR442C NHP2P32495 156 aaPredicted RBP1.97□□□□□ -2.09
SIR3YLR442C YAR068WP39564 161 aa1.97□□□□□ -2.09
SIR3YLR442C YER135CP40082 130 aa1.97□□□□□ -2.09
SIR3YLR442C YDR042CQ03205 200 aa1.97□□□□□ -2.09
SIR3YLR442C URA5P13298 226 aaKnown RBP1.97□□□□□ -2.09
SIR3YLR442C CTP1P38152 299 aa1.97□□□□□ -2.09
SIR3YLR442C COX14P39103 70 aa1.97□□□□□ -2.09
SIR3YLR442C EDC2P40023 145 aaPredicted RBP1.97□□□□□ -2.09
SIR3YLR442C RIM9Q04734 239 aa1.97□□□□□ -2.09
SIR3YLR442C YLR365WQ7LIF2 110 aa1.97□□□□□ -2.09
SIR3YLR442C SKI6P46948 246 aaPredicted RBP1.96□□□□□ -2.1
SIR3YLR442C TRS23Q03784 219 aa1.96□□□□□ -2.1
SIR3YLR442C YPL278CQ08990 100 aa1.96□□□□□ -2.1
SIR3YLR442C USV1Q12132 391 aa1.96□□□□□ -2.1
SIR3YLR442C RPL40AP0CH08 128 aaKnown RBP1.96□□□□□ -2.1
SIR3YLR442C RPL40BP0CH09 128 aaKnown RBP1.96□□□□□ -2.1
SIR3YLR442C YKR045CP36138 183 aa1.96□□□□□ -2.1
SIR3YLR442C YBL081WP38180 368 aaKnown RBP1.96□□□□□ -2.1
SIR3YLR442C YBR292CP38357 123 aa1.96□□□□□ -2.1
SIR3YLR442C YND1P40009 630 aa1.96□□□□□ -2.1
SIR3YLR442C MRPS8Q03799 155 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms