RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W TIM23P32897 222 aa3.51□□□□□ -1.85
SEN1YLR430W KTI12P34253 313 aaKnown RBP3.51□□□□□ -1.85
SEN1YLR430W YNL217WP40152 326 aa3.51□□□□□ -1.85
SEN1YLR430W YMR103CQ04436 120 aa3.51□□□□□ -1.85
SEN1YLR430W MCH4Q08268 501 aa3.51□□□□□ -1.85
SEN1YLR430W RPS2P25443 254 aaKnown RBP3.51□□□□□ -1.85
SEN1YLR430W YCR050CP25630 102 aa3.51□□□□□ -1.85
SEN1YLR430W YHL018WP38744 120 aaPredicted RBP3.51□□□□□ -1.85
SEN1YLR430W MST27P53176 234 aa3.51□□□□□ -1.85
SEN1YLR430W YOR029WQ12243 111 aa3.51□□□□□ -1.85
SEN1YLR430W OM14P38325 134 aa3.51□□□□□ -1.85
SEN1YLR430W YJL007CP47080 104 aa3.51□□□□□ -1.85
SEN1YLR430W YLR302CO13544 120 aa3.51□□□□□ -1.85
SEN1YLR430W TIM17P39515 158 aa3.51□□□□□ -1.85
SEN1YLR430W YPL038W-AQ3E7B4 63 aa3.51□□□□□ -1.85
SEN1YLR430W HST4P53688 370 aa3.5□□□□□ -1.85
SEN1YLR430W TIM18Q08749 192 aa3.5□□□□□ -1.85
SEN1YLR430W AQY1P0CD91 305 aa3.5□□□□□ -1.85
SEN1YLR430W SRX1P36077 127 aa3.5□□□□□ -1.85
SEN1YLR430W YDR215CQ12240 137 aa3.5□□□□□ -1.85
SEN1YLR430W RPL2AP0CX45 254 aaKnown RBP3.5□□□□□ -1.85
SEN1YLR430W RPL2BP0CX46 254 aaKnown RBP3.5□□□□□ -1.85
SEN1YLR430W SUT2Q12286 268 aa3.5□□□□□ -1.85
SEN1YLR430W HSP12P22943 109 aaKnown RBP3.5□□□□□ -1.85
SEN1YLR430W GPI18P38211 433 aa3.5□□□□□ -1.85
SEN1YLR430W YMR320WQ04897 101 aa3.5□□□□□ -1.85
SEN1YLR430W YMR321CQ04898 105 aa3.5□□□□□ -1.85
SEN1YLR430W YHR173CP38864 112 aa3.5□□□□□ -1.85
SEN1YLR430W CUZ1P53899 274 aa3.5□□□□□ -1.85
SEN1YLR430W RLM1Q12224 676 aa3.5□□□□□ -1.85
SEN1YLR430W YDR102CQ03864 110 aa3.49□□□□□ -1.85
SEN1YLR430W YBR255C-AQ3E776 120 aa3.49□□□□□ -1.85
SEN1YLR430W Q0255P03881 472 aa3.49□□□□□ -1.85
SEN1YLR430W UBC11P52492 156 aa3.49□□□□□ -1.85
SEN1YLR430W YDR042CQ03205 200 aa3.49□□□□□ -1.85
SEN1YLR430W CYT1P07143 309 aa3.49□□□□□ -1.85
SEN1YLR430W RFA2P26754 273 aaKnown RBP3.49□□□□□ -1.85
SEN1YLR430W OST1P41543 476 aaKnown RBP3.49□□□□□ -1.85
SEN1YLR430W FIP1P45976 327 aa3.49□□□□□ -1.85
SEN1YLR430W GPI19Q04082 140 aa3.49□□□□□ -1.85
SEN1YLR430W HNT3Q08702 217 aa3.49□□□□□ -1.85
SEN1YLR430W MYO1P08964 1928 aa3.49□□□□□ -1.85
SEN1YLR430W MOT1P32333 1867 aa3.48□□□□□ -1.85
SEN1YLR430W YHR139C-AO13536 103 aa3.48□□□□□ -1.85
SEN1YLR430W RPB8P20436 146 aa3.48□□□□□ -1.85
SEN1YLR430W IMP1P28627 190 aa3.48□□□□□ -1.85
SEN1YLR430W NCE103P53615 221 aa3.48□□□□□ -1.85
SEN1YLR430W SHH4Q06236 168 aa3.48□□□□□ -1.85
SEN1YLR430W PIS1P06197 220 aaKnown RBP3.48□□□□□ -1.85
SEN1YLR430W YMR316C-AI2HB70 103 aa3.47□□□□□ -1.85
SEN1YLR430W UBC13P52490 153 aa3.47□□□□□ -1.85
SEN1YLR430W YFL051CP43552 160 aa3.47□□□□□ -1.85
SEN1YLR430W MMS2P53152 137 aa3.47□□□□□ -1.85
SEN1YLR430W SMP1P38128 452 aa3.47□□□□□ -1.85
SEN1YLR430W SVP26P38869 228 aa3.47□□□□□ -1.85
SEN1YLR430W HNT2P49775 206 aa3.47□□□□□ -1.85
SEN1YLR430W LST8P41318 303 aa3.47□□□□□ -1.85
SEN1YLR430W MSA1Q08471 629 aa3.47□□□□□ -1.85
SEN1YLR430W MRPL31P14063 131 aaPredicted RBP3.46□□□□□ -1.85
SEN1YLR430W EMC6Q12431 108 aa3.46□□□□□ -1.85
SEN1YLR430W BET1P22804 142 aa3.46□□□□□ -1.86
SEN1YLR430W SFT1P43682 97 aa3.46□□□□□ -1.86
SEN1YLR430W VPS55P47111 140 aa3.46□□□□□ -1.86
SEN1YLR430W YGR050CP53231 118 aa3.46□□□□□ -1.86
SEN1YLR430W MRS3P10566 314 aa3.46□□□□□ -1.86
SEN1YLR430W LYS1P38998 373 aaRIP-Chip data3.46□□□□□ -1.86not detected
SEN1YLR430W USV1Q12132 391 aa3.46□□□□□ -1.86
SEN1YLR430W DSE2P38844 325 aa3.46□□□□□ -1.86
SEN1YLR430W RRT13P40042 185 aa3.46□□□□□ -1.86
SEN1YLR430W RPL20AP0CX23 172 aaKnown RBP3.46□□□□□ -1.86
SEN1YLR430W RPL20BP0CX24 172 aaPredicted RBP3.46□□□□□ -1.86
SEN1YLR430W MBB1P39534 108 aa3.46□□□□□ -1.86
SEN1YLR430W CIS3P47001 227 aa3.46□□□□□ -1.86
SEN1YLR430W PIR1Q03178 341 aa3.46□□□□□ -1.86
SEN1YLR430W ERF2Q06551 359 aa3.46□□□□□ -1.86
SEN1YLR430W YRA2P36036 203 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
SEN1YLR430W KSH1Q8TGJ3 72 aa3.45□□□□□ -1.86
SEN1YLR430W FMP46P36141 133 aaKnown RBP3.45□□□□□ -1.86
SEN1YLR430W SFT2P38166 215 aa3.45□□□□□ -1.86
SEN1YLR430W YSY6P38374 65 aa3.45□□□□□ -1.86
SEN1YLR430W NCA3P46955 337 aa3.45□□□□□ -1.86
SEN1YLR430W RXT3Q07458 294 aa3.45□□□□□ -1.86
SEN1YLR430W YNL046WP53956 172 aa3.45□□□□□ -1.86
SEN1YLR430W MDM35O60200 86 aa3.45□□□□□ -1.86
SEN1YLR430W RPL16BP26785 198 aaKnown RBP3.45□□□□□ -1.86
SEN1YLR430W REC104P33323 182 aa3.45□□□□□ -1.86
SEN1YLR430W RPL32P38061 130 aaKnown RBP3.45□□□□□ -1.86
SEN1YLR430W FPR2P32472 135 aa3.45□□□□□ -1.86
SEN1YLR430W YHR180WP38868 163 aa3.45□□□□□ -1.86
SEN1YLR430W IGO2Q9P305 131 aa3.45□□□□□ -1.86
SEN1YLR430W ROX3P25046 220 aa3.44□□□□□ -1.86
SEN1YLR430W FIT2Q08906 153 aa3.44□□□□□ -1.86
SEN1YLR430W YPL261CQ08976 102 aa3.44□□□□□ -1.86
SEN1YLR430W TOM40P23644 387 aaKnown RBP3.44□□□□□ -1.86
SEN1YLR430W YDR381C-AQ3E6R5 114 aa3.44□□□□□ -1.86
SEN1YLR430W PCL2P25693 308 aa3.44□□□□□ -1.86
SEN1YLR430W YGL258W-AQ3E740 77 aa3.44□□□□□ -1.86
SEN1YLR430W RPL28P02406 149 aaKnown RBP3.43□□□□□ -1.86
SEN1YLR430W SIM1P40472 476 aa3.43□□□□□ -1.86
SEN1YLR430W SGN1P40561 250 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms