RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W SLM6P38343 150 aa3.27□□□□□ -1.89
VPS36YLR417W SRP14P38985 146 aa3.27□□□□□ -1.89
VPS36YLR417W YEA6P39953 335 aa3.27□□□□□ -1.89
VPS36YLR417W YER121WP40076 114 aa3.27□□□□□ -1.89
VPS36YLR417W NSA2P40078 261 aaKnown RBP3.27□□□□□ -1.89
VPS36YLR417W APQ12P40532 138 aa3.27□□□□□ -1.89
VPS36YLR417W PAM16P42949 149 aa3.27□□□□□ -1.89
VPS36YLR417W GPI14P47088 403 aaKnown RBP3.27□□□□□ -1.89
VPS36YLR417W ERG25P53045 309 aa3.27□□□□□ -1.89
VPS36YLR417W YGL235WP53071 178 aa3.27□□□□□ -1.89
VPS36YLR417W YGR042WP53227 271 aa3.27□□□□□ -1.89
VPS36YLR417W YDR366CP87287 132 aa3.27□□□□□ -1.89
VPS36YLR417W YPL162CQ12042 273 aa3.27□□□□□ -1.89
VPS36YLR417W ODC2Q99297 307 aa3.27□□□□□ -1.89
VPS36YLR417W APS2Q00381 147 aa3.26□□□□□ -1.89
VPS36YLR417W SEN15Q04675 128 aa3.26□□□□□ -1.89
VPS36YLR417W SYM1Q06563 197 aa3.26□□□□□ -1.89
VPS36YLR417W PAU23Q07987 124 aa3.26□□□□□ -1.89
VPS36YLR417W PAU17Q12370 124 aa3.26□□□□□ -1.89
VPS36YLR417W QCR2P07257 368 aa3.25□□□□□ -1.89
VPS36YLR417W MDH3P32419 343 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
VPS36YLR417W AME1P38313 324 aa3.25□□□□□ -1.89
VPS36YLR417W YEL073CP39974 107 aa3.25□□□□□ -1.89
VPS36YLR417W YGR017WP53210 297 aa3.25□□□□□ -1.89
VPS36YLR417W RRT7Q07829 113 aa3.25□□□□□ -1.89
VPS36YLR417W MCP1Q12106 302 aa3.25□□□□□ -1.89
VPS36YLR417W RPS25BP0C0T4 108 aaKnown RBP3.24□□□□□ -1.89
VPS36YLR417W ANB1P19211 157 aa3.24□□□□□ -1.89
VPS36YLR417W SUA7P29055 345 aaPredicted RBP3.24□□□□□ -1.89
VPS36YLR417W GSP1P32835 219 aaKnown RBP3.24□□□□□ -1.89
VPS36YLR417W GSP2P32836 220 aaKnown RBP3.24□□□□□ -1.89
VPS36YLR417W YKL102CP34249 101 aa3.24□□□□□ -1.89
VPS36YLR417W YOR062CP36025 268 aa3.24□□□□□ -1.89
VPS36YLR417W RPB11P38902 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU4P53427 120 aa3.24□□□□□ -1.89
VPS36YLR417W HHT1P61830 136 aa3.24□□□□□ -1.89
VPS36YLR417W VPS28Q02767 242 aa3.24□□□□□ -1.89
VPS36YLR417W SHH3Q04487 196 aa3.24□□□□□ -1.89
VPS36YLR417W ATG10Q07879 167 aa3.24□□□□□ -1.89
VPS36YLR417W RPS25AQ3E792 108 aaPredicted RBP3.24□□□□□ -1.89
VPS36YLR417W IGO2Q9P305 131 aa3.24□□□□□ -1.89
VPS36YLR417W PAU1P0CE88 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU14P0CE89 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU6P0CE90 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU18P0CE91 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU8P0CE92 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU11P0CE93 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU13P38725 120 aa3.24□□□□□ -1.89
VPS36YLR417W THG1P53215 237 aaKnown RBP3.24□□□□□ -1.89
VPS36YLR417W YPL067CQ02754 198 aa3.24□□□□□ -1.89
VPS36YLR417W PAU10Q03050 120 aa3.24□□□□□ -1.89
VPS36YLR417W MIX17Q03667 156 aa3.24□□□□□ -1.89
VPS36YLR417W CNL1Q06333 122 aa3.24□□□□□ -1.89
VPS36YLR417W PAU20Q08322 120 aa3.24□□□□□ -1.89
VPS36YLR417W PAU9Q3E770 120 aa3.24□□□□□ -1.89
VPS36YLR417W YFR032C-BQ8TGU2 87 aa3.24□□□□□ -1.89
VPS36YLR417W SLH1P53327 1967 aaKnown RBP3.24□□□□□ -1.89
VPS36YLR417W MDM35O60200 86 aa3.23□□□□□ -1.89
VPS36YLR417W URA5P13298 226 aaKnown RBP3.23□□□□□ -1.89
VPS36YLR417W BET1P22804 142 aa3.23□□□□□ -1.89
VPS36YLR417W MRP49P32388 137 aa3.23□□□□□ -1.89
VPS36YLR417W UTR5P32630 166 aa3.23□□□□□ -1.89
VPS36YLR417W MED6P38782 295 aa3.23□□□□□ -1.89
VPS36YLR417W YNR064CP53750 290 aa3.23□□□□□ -1.89
VPS36YLR417W RCE1Q03530 315 aa3.23□□□□□ -1.89
VPS36YLR417W NMA1Q06178 401 aaKnown RBP3.23□□□□□ -1.89
VPS36YLR417W RFU1Q08003 200 aa3.23□□□□□ -1.89
VPS36YLR417W EMC6Q12431 108 aa3.23□□□□□ -1.89
VPS36YLR417W PEX4P29340 183 aa3.22□□□□□ -1.89
VPS36YLR417W UPS2P35200 230 aa3.22□□□□□ -1.89
VPS36YLR417W PAU16P35994 123 aa3.22□□□□□ -1.89
VPS36YLR417W EAF6P47128 113 aa3.22□□□□□ -1.89
VPS36YLR417W YGR219WP53307 113 aa3.22□□□□□ -1.89
VPS36YLR417W YNL184CP53876 108 aa3.22□□□□□ -1.89
VPS36YLR417W YOL024WQ08172 172 aa3.22□□□□□ -1.89
VPS36YLR417W YOR015WQ12169 119 aa3.22□□□□□ -1.89
VPS36YLR417W HUT1Q12520 339 aa3.22□□□□□ -1.89
VPS36YLR417W TSC3Q3E790 80 aa3.22□□□□□ -1.89
VPS36YLR417W MSB2P32334 1306 aa3.22□□□□□ -1.89
VPS36YLR417W DDI2P0CH63 225 aa3.22□□□□□ -1.89
VPS36YLR417W DDI3P0CH64 225 aa3.22□□□□□ -1.89
VPS36YLR417W UMP1P38293 148 aa3.22□□□□□ -1.89
VPS36YLR417W YHR180WP38868 163 aa3.22□□□□□ -1.89
VPS36YLR417W YLR460CP54007 376 aa3.22□□□□□ -1.89
VPS36YLR417W DAD3P69850 94 aa3.22□□□□□ -1.89
VPS36YLR417W NAT5Q08689 176 aa3.22□□□□□ -1.89
VPS36YLR417W ATO3Q12359 275 aa3.22□□□□□ -1.89
VPS36YLR417W FMP49A0A023PZB3 126 aa3.21□□□□□ -1.9
VPS36YLR417W MDH2P22133 377 aa3.21□□□□□ -1.9
VPS36YLR417W GLE2P40066 365 aa3.21□□□□□ -1.9
VPS36YLR417W XPT1P47165 209 aa3.21□□□□□ -1.9
VPS36YLR417W TTI2P47168 421 aa3.21□□□□□ -1.9
VPS36YLR417W PIR1Q03178 341 aa3.21□□□□□ -1.9
VPS36YLR417W YML079WQ03629 201 aa3.21□□□□□ -1.9
VPS36YLR417W YMR082CQ04276 118 aa3.21□□□□□ -1.9
VPS36YLR417W YMR090WQ04304 227 aaKnown RBP3.21□□□□□ -1.9
VPS36YLR417W ATG40Q99325 256 aa3.21□□□□□ -1.9
VPS36YLR417W ECM29P38737 1868 aa3.2□□□□□ -1.9
VPS36YLR417W MBF1O14467 151 aaKnown RBP3.2□□□□□ -1.9
VPS36YLR417W PAI3P01094 68 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 66.8 ms