RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C SDH7Q04401 133 aa1.06□□□□□ -2.24
UBP11YKR098C NAT5Q08689 176 aa1.06□□□□□ -2.24
UBP11YKR098C Q0144Q9ZZW2 109 aa1.06□□□□□ -2.24
UBP11YKR098C FUN14P18411 198 aa1.05□□□□□ -2.24
UBP11YKR098C MRP49P32388 137 aa1.05□□□□□ -2.24
UBP11YKR098C QCR10P37299 77 aa1.05□□□□□ -2.24
UBP11YKR098C GSC2P40989 1895 aa1.04□□□□□ -2.24
UBP11YKR098C RPL33AP05744 107 aaKnown RBP1.04□□□□□ -2.24
UBP11YKR098C MRPL44P19956 98 aa1.04□□□□□ -2.24
UBP11YKR098C SFT2P38166 215 aa1.04□□□□□ -2.24
UBP11YKR098C YGL149WP53116 101 aa1.04□□□□□ -2.24
UBP11YKR098C SED1Q01589 338 aa1.04□□□□□ -2.24
UBP11YKR098C YPL067CQ02754 198 aa1.04□□□□□ -2.24
UBP11YKR098C SEN15Q04675 128 aa1.04□□□□□ -2.24
UBP11YKR098C YGL014C-AP0C5N1 53 aa1.04□□□□□ -2.24
UBP11YKR098C SLO1Q3E784 85 aa1.04□□□□□ -2.24
UBP11YKR098C NMT1P14743 455 aa1.03□□□□□ -2.24
UBP11YKR098C BRP1P53194 125 aa1.03□□□□□ -2.24
UBP11YKR098C YMR007WQ03675 126 aa1.03□□□□□ -2.24
UBP11YKR098C HUA1P40325 198 aa1.03□□□□□ -2.25
UBP11YKR098C SAE3P89114 91 aa1.03□□□□□ -2.25
UBP11YKR098C LCL2Q08045 131 aa1.03□□□□□ -2.25
UBP11YKR098C CCW12Q12127 133 aa1.03□□□□□ -2.25
UBP11YKR098C WIP1Q2V2P8 89 aa1.03□□□□□ -2.25
UBP11YKR098C PAU21P0CE86 164 aa1.02□□□□□ -2.25
UBP11YKR098C PAU22P0CE87 164 aa1.02□□□□□ -2.25
UBP11YKR098C RPL40AP0CH08 128 aaKnown RBP1.02□□□□□ -2.25
UBP11YKR098C RPL40BP0CH09 128 aaKnown RBP1.02□□□□□ -2.25
UBP11YKR098C YAR064WP39563 99 aa1.02□□□□□ -2.25
UBP11YKR098C GAT4P40569 121 aa1.02□□□□□ -2.25
UBP11YKR098C YLR099W-AQ3E798 87 aa1.02□□□□□ -2.25
UBP11YKR098C HSL1P34244 1518 aa1.02□□□□□ -2.25
UBP11YKR098C HSP10P38910 106 aa1.01□□□□□ -2.25
UBP11YKR098C VMA7P39111 118 aa1.01□□□□□ -2.25
UBP11YKR098C SKI3P17883 1432 aaKnown RBP1.01□□□□□ -2.25
UBP11YKR098C YHR213WP0CI67 198 aa1.01□□□□□ -2.25
UBP11YKR098C UTP11P34247 250 aaPredicted RBP1.01□□□□□ -2.25
UBP11YKR098C YOR376W-AQ3E805 51 aa1.01□□□□□ -2.25
UBP11YKR098C RTC6O14464 93 aa1□□□□□ -2.25
UBP11YKR098C ANB1P19211 157 aa1□□□□□ -2.25
UBP11YKR098C SRL3P36167 246 aa1□□□□□ -2.25
UBP11YKR098C MRPL11P36521 249 aaPredicted RBP1□□□□□ -2.25
UBP11YKR098C LST8P41318 303 aa1□□□□□ -2.25
UBP11YKR098C YMR122CQ03879 124 aa1□□□□□ -2.25
UBP11YKR098C FRQ1Q06389 190 aa1□□□□□ -2.25
UBP11YKR098C YLR118CQ12354 227 aa1□□□□□ -2.25
UBP11YKR098C MPC1P53157 130 aaKnown RBP1□□□□□ -2.25
UBP11YKR098C PRM3Q08931 133 aa1□□□□□ -2.25
UBP11YKR098C YOL013W-AP0C272 63 aaPredicted RBP0.99□□□□□ -2.25
UBP11YKR098C HAP3P13434 144 aa0.99□□□□□ -2.25
UBP11YKR098C YCR001WP25347 104 aa0.99□□□□□ -2.25
UBP11YKR098C YKL044WP36092 106 aa0.99□□□□□ -2.25
UBP11YKR098C ERV14P53173 138 aa0.99□□□□□ -2.25
UBP11YKR098C AIM11P87275 137 aa0.99□□□□□ -2.25
UBP11YKR098C YLR296WQ05898 108 aa0.99□□□□□ -2.25
UBP11YKR098C GTT2Q12390 233 aa0.99□□□□□ -2.25
UBP11YKR098C MYO2P19524 1574 aaKnown RBP0.99□□□□□ -2.25
UBP11YKR098C SEC59P20048 519 aa0.98□□□□□ -2.25
UBP11YKR098C UGX2P32772 223 aa0.98□□□□□ -2.25
UBP11YKR098C AIM18P38884 321 aa0.98□□□□□ -2.25
UBP11YKR098C YIL102CP40488 101 aa0.98□□□□□ -2.25
UBP11YKR098C YNL122CP53921 115 aaPredicted RBP0.98□□□□□ -2.25
UBP11YKR098C AIM4P38305 123 aaPredicted RBP0.98□□□□□ -2.25
UBP11YKR098C RPL37AP49166 88 aaKnown RBP0.98□□□□□ -2.25
UBP11YKR098C SPC24Q04477 213 aa0.98□□□□□ -2.25
UBP11YKR098C COA4Q05809 96 aa0.98□□□□□ -2.25
UBP11YKR098C RPB11P38902 120 aa0.97□□□□□ -2.25
UBP11YKR098C YER137CP40083 148 aaKnown RBP0.97□□□□□ -2.25
UBP11YKR098C KTI11Q3E840 82 aa0.97□□□□□ -2.25
UBP11YKR098C RPO41P13433 1351 aaKnown RBP0.97□□□□□ -2.25
UBP11YKR098C SNF11P38956 169 aa0.97□□□□□ -2.25
UBP11YKR098C APS2Q00381 147 aa0.97□□□□□ -2.25
UBP11YKR098C AIM36Q03798 255 aa0.97□□□□□ -2.25
UBP11YKR098C IRC21Q04772 201 aa0.97□□□□□ -2.25
UBP11YKR098C HAP2P06774 265 aa0.96□□□□□ -2.26
UBP11YKR098C PFY1P07274 126 aa0.96□□□□□ -2.26
UBP11YKR098C GPI19Q04082 140 aa0.96□□□□□ -2.26
UBP11YKR098C SNT2P53127 1403 aa0.96□□□□□ -2.26
UBP11YKR098C ROM2P51862 1356 aaKnown RBP0.96□□□□□ -2.26
UBP11YKR098C LAA1P39526 2014 aa0.96□□□□□ -2.26
UBP11YKR098C RPL36BO14455 100 aaKnown RBP0.96□□□□□ -2.26
UBP11YKR098C RPL36AP05745 100 aaPredicted RBP0.96□□□□□ -2.26
UBP11YKR098C ADK1P07170 222 aaKnown RBP0.96□□□□□ -2.26
UBP11YKR098C LDB18Q07887 179 aa0.96□□□□□ -2.26
UBP11YKR098C GSP1P32835 219 aaKnown RBP0.95□□□□□ -2.26
UBP11YKR098C ECM5Q03214 1411 aa0.95□□□□□ -2.26
UBP11YKR098C SSN2P38931 1420 aa0.94□□□□□ -2.26
UBP11YKR098C TRM732Q03496 1420 aa0.94□□□□□ -2.26
UBP11YKR098C RPS22AP0C0W1 130 aaKnown RBP0.94□□□□□ -2.26
UBP11YKR098C YLR042CQ07990 161 aa0.94□□□□□ -2.26
UBP11YKR098C YOR072WQ08486 104 aa0.94□□□□□ -2.26
UBP11YKR098C YPL225WQ08971 146 aaKnown RBP0.94□□□□□ -2.26
UBP11YKR098C YOR289WQ12012 251 aaPredicted RBP0.94□□□□□ -2.26
UBP11YKR098C RPS22BQ3E7Y3 130 aaKnown RBP0.94□□□□□ -2.26
UBP11YKR098C YKL068W-AQ3E826 78 aa0.94□□□□□ -2.26
UBP11YKR098C YSF3P0C074 85 aaPredicted RBP0.94□□□□□ -2.26
UBP11YKR098C YJL009WP47078 108 aa0.94□□□□□ -2.26
UBP11YKR098C MGR2Q02889 113 aa0.94□□□□□ -2.26
UBP11YKR098C RUB1Q03919 77 aa0.94□□□□□ -2.26
UBP11YKR098C YLR194CQ05777 254 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms