RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	PET54	P10834	293 aa		4.66	□□□□□ -1.66
TIF1	YKR059W	STF2	P16965	84 aa		4.66	□□□□□ -1.66
TIF1	YKR059W	OCH1	P31755	480 aa		4.66	□□□□□ -1.66
TIF1	YKR059W	GVP36	P40531	326 aa	Known RBP	4.66	□□□□□ -1.66
TIF1	YKR059W	TMA20	P89886	181 aa	Predicted RBP	4.66	□□□□□ -1.66
TIF1	YKR059W	ATG39	Q06159	398 aa		4.66	□□□□□ -1.66
TIF1	YKR059W	NMA1	Q06178	401 aa	Known RBP	4.66	□□□□□ -1.66
TIF1	YKR059W	YPL162C	Q12042	273 aa		4.66	□□□□□ -1.66
TIF1	YKR059W	MED11	Q99278	115 aa		4.66	□□□□□ -1.66
TIF1	YKR059W	IRC22	P40006	225 aa		4.65	□□□□□ -1.67
TIF1	YKR059W	FCY21	P40039	528 aa		4.65	□□□□□ -1.67
TIF1	YKR059W	YAE1	P47118	141 aa	Predicted RBP	4.65	□□□□□ -1.67
TIF1	YKR059W	YDR274C	P87283	123 aa		4.65	□□□□□ -1.67
TIF1	YKR059W	YOR192C-C	Q3E736	78 aa		4.65	□□□□□ -1.67
TIF1	YKR059W	ADH1	P00330	348 aa	Known RBP	4.64	□□□□□ -1.67
TIF1	YKR059W	BUD23	P25627	275 aa	Predicted RBP	4.64	□□□□□ -1.67
TIF1	YKR059W	RPB7	P34087	171 aa		4.64	□□□□□ -1.67
TIF1	YKR059W	GPI14	P47088	403 aa	Known RBP	4.64	□□□□□ -1.67
TIF1	YKR059W	YGR219W	P53307	113 aa		4.64	□□□□□ -1.67
TIF1	YKR059W	HST4	P53688	370 aa		4.64	□□□□□ -1.67
TIF1	YKR059W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
TIF1	YKR059W	YLR365W	Q7LIF2	110 aa		4.64	□□□□□ -1.67
TIF1	YKR059W	CKS1	P20486	150 aa	Known RBP	4.63	□□□□□ -1.67
TIF1	YKR059W	BET1	P22804	142 aa		4.63	□□□□□ -1.67
TIF1	YKR059W	CNB1	P25296	175 aa		4.63	□□□□□ -1.67
TIF1	YKR059W	MRPS9	P38120	278 aa		4.63	□□□□□ -1.67
TIF1	YKR059W	OST2	P46964	130 aa		4.63	□□□□□ -1.67
TIF1	YKR059W	YLR099W-A	Q3E798	87 aa		4.63	□□□□□ -1.67
TIF1	YKR059W	RPL9A	P05738	191 aa	Known RBP	4.62	□□□□□ -1.67
TIF1	YKR059W	YBL010C	P32788	280 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
TIF1	YKR059W	YKR045C	P36138	183 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	DOC1	P53068	250 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	YOL118C	Q08259	102 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	DGA1	Q08650	418 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	BOL1	Q3E793	110 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	YPR108W-A	Q3E7B3	70 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	YOS1	Q3E834	85 aa		4.62	□□□□□ -1.67
TIF1	YKR059W	URA5	P13298	226 aa	Known RBP	4.61	□□□□□ -1.67
TIF1	YKR059W	ROX3	P25046	220 aa		4.61	□□□□□ -1.67
TIF1	YKR059W	ARC15	P40518	154 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
TIF1	YKR059W	PAM16	P42949	149 aa		4.61	□□□□□ -1.67
TIF1	YKR059W	YFR035C	P43608	114 aa		4.61	□□□□□ -1.67
TIF1	YKR059W	MOG1	P47123	218 aa		4.61	□□□□□ -1.67
TIF1	YKR059W	ARO8	P53090	500 aa	Known RBP	4.61	□□□□□ -1.67
TIF1	YKR059W	HRD1	Q08109	551 aa		4.61	□□□□□ -1.67
TIF1	YKR059W	PBI2	P0CT04	75 aa	Known RBP	4.6	□□□□□ -1.67
TIF1	YKR059W	YGR042W	P53227	271 aa		4.6	□□□□□ -1.67
TIF1	YKR059W	YFR032C-B	Q8TGU2	87 aa		4.6	□□□□□ -1.67
TIF1	YKR059W	UTP11	P34247	250 aa	Predicted RBP	4.59	□□□□□ -1.67
TIF1	YKR059W	YJL218W	P40892	196 aa	Known RBP	4.59	□□□□□ -1.67
TIF1	YKR059W	YFR045W	P43617	309 aa		4.59	□□□□□ -1.67
TIF1	YKR059W	ARP3	P47117	449 aa	Known RBP	4.59	□□□□□ -1.67
TIF1	YKR059W	RAD28	Q12021	506 aa		4.59	□□□□□ -1.67
TIF1	YKR059W	YLR156W	P0CE96	114 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	YLR159W	P0CE97	114 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	YLR161W	P0CE98	114 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	AGA2	P32781	87 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	YHR125W	P38831	101 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	YHR138C	P38841	114 aa	Predicted RBP	4.58	□□□□□ -1.68
TIF1	YKR059W	PRE5	P40302	234 aa	Known RBP	4.58	□□□□□ -1.68
TIF1	YKR059W	YGR026W	P53217	278 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	BUD25	P85052	153 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	TSA2	Q04120	196 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	YPR063C	Q12160	140 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	ODC2	Q99297	307 aa		4.58	□□□□□ -1.68
TIF1	YKR059W	RPB3	P16370	318 aa	Known RBP	4.57	□□□□□ -1.68
TIF1	YKR059W	FMP23	P38231	175 aa		4.57	□□□□□ -1.68
TIF1	YKR059W	PKR1	Q03880	122 aa	Known RBP	4.57	□□□□□ -1.68
TIF1	YKR059W	MRPL38	P35996	138 aa	Predicted RBP	4.56	□□□□□ -1.68
TIF1	YKR059W	DSK2	P48510	373 aa		4.56	□□□□□ -1.68
TIF1	YKR059W	TSC3	Q3E790	80 aa		4.56	□□□□□ -1.68
TIF1	YKR059W	UPS2	P35200	230 aa		4.55	□□□□□ -1.68
TIF1	YKR059W	VMA22	P38784	181 aa		4.55	□□□□□ -1.68
TIF1	YKR059W	YIR035C	P40579	254 aa		4.55	□□□□□ -1.68
TIF1	YKR059W	ATG41	Q12048	136 aa		4.55	□□□□□ -1.68
TIF1	YKR059W	YCR023C	P25351	611 aa		4.54	□□□□□ -1.68
TIF1	YKR059W	YER137C	P40083	148 aa	Known RBP	4.54	□□□□□ -1.68
TIF1	YKR059W	SKI6	P46948	246 aa	Predicted RBP	4.54	□□□□□ -1.68
TIF1	YKR059W	RAV2	Q03956	351 aa		4.54	□□□□□ -1.68
TIF1	YKR059W	FCF1	Q05498	189 aa	Predicted RBP	4.54	□□□□□ -1.68
TIF1	YKR059W	KEI1	Q06346	221 aa		4.54	□□□□□ -1.68
TIF1	YKR059W	Q0255	P03881	472 aa		4.53	□□□□□ -1.68
TIF1	YKR059W	LST8	P41318	303 aa		4.53	□□□□□ -1.68
TIF1	YKR059W	YJR111C	P47148	283 aa	Known RBP	4.53	□□□□□ -1.68
TIF1	YKR059W	YGL088W	P53151	121 aa		4.53	□□□□□ -1.68
TIF1	YKR059W	TAR1	Q8TGM6	124 aa		4.53	□□□□□ -1.68
TIF1	YKR059W	NOP1	P15646	327 aa	Known RBP	4.52	□□□□□ -1.69
TIF1	YKR059W	YKR032W	P36127	104 aa		4.52	□□□□□ -1.69
TIF1	YKR059W	TDA4	P47153	279 aa		4.52	□□□□□ -1.69
TIF1	YKR059W	COX12	Q01519	83 aa		4.52	□□□□□ -1.69
TIF1	YKR059W	HUG1	Q6Q5K6	68 aa		4.52	□□□□□ -1.69
TIF1	YKR059W	SOD1	P00445	154 aa	Known RBP	4.51	□□□□□ -1.69
TIF1	YKR059W	SPO13	P23624	291 aa		4.51	□□□□□ -1.69
TIF1	YKR059W	FMT1	P32785	401 aa		4.51	□□□□□ -1.69
TIF1	YKR059W	NRG2	P38082	220 aa		4.5	□□□□□ -1.69
TIF1	YKR059W	SLM6	P38343	150 aa		4.5	□□□□□ -1.69
TIF1	YKR059W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
TIF1	YKR059W	COA4	Q05809	96 aa		4.5	□□□□□ -1.69
TIF1	YKR059W	YGL258W-A	Q3E740	77 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 84.7 ms