RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A SNT2P53127 1403 aa1.61□□□□□ -2.15
SFT1YKL006C-A YER039C-AP0CD97 72 aa1.61□□□□□ -2.15
SFT1YKL006C-A YAR029WP39549 74 aa1.61□□□□□ -2.15
SFT1YKL006C-A RPL13BP40212 199 aaKnown RBP1.61□□□□□ -2.15
SFT1YKL006C-A RCE1Q03530 315 aa1.61□□□□□ -2.15
SFT1YKL006C-A FCF2Q12035 217 aaPredicted RBP1.61□□□□□ -2.15
SFT1YKL006C-A RPL13AQ12690 199 aaPredicted RBP1.61□□□□□ -2.15
SFT1YKL006C-A YNL146C-AQ3E7Z1 64 aa1.61□□□□□ -2.15
SFT1YKL006C-A QCR8P08525 94 aa1.6□□□□□ -2.15
SFT1YKL006C-A ANB1P19211 157 aa1.6□□□□□ -2.15
SFT1YKL006C-A MRPL44P19956 98 aa1.6□□□□□ -2.15
SFT1YKL006C-A FPR1P20081 114 aaKnown RBP1.6□□□□□ -2.15
SFT1YKL006C-A YCL042WP25572 119 aa1.6□□□□□ -2.15
SFT1YKL006C-A SRL3P36167 246 aa1.6□□□□□ -2.15
SFT1YKL006C-A TY1B-HO13535 1793 aa1.59□□□□□ -2.15
SFT1YKL006C-A NMT1P14743 455 aa1.59□□□□□ -2.15
SFT1YKL006C-A FUN14P18411 198 aa1.59□□□□□ -2.15
SFT1YKL006C-A GSP1P32835 219 aaKnown RBP1.59□□□□□ -2.15
SFT1YKL006C-A ECM31P38122 312 aa1.59□□□□□ -2.15
SFT1YKL006C-A RGI1P40043 161 aaPredicted RBP1.59□□□□□ -2.15
SFT1YKL006C-A DCV1P43595 202 aa1.59□□□□□ -2.15
SFT1YKL006C-A YGL230CP53074 147 aa1.59□□□□□ -2.15
SFT1YKL006C-A YGL149WP53116 101 aa1.59□□□□□ -2.15
SFT1YKL006C-A MPC1P53157 130 aaKnown RBP1.59□□□□□ -2.15
SFT1YKL006C-A GPI11Q06636 219 aa1.59□□□□□ -2.15
SFT1YKL006C-A YGL010WP25338 174 aa1.58□□□□□ -2.16
SFT1YKL006C-A YKL044WP36092 106 aa1.58□□□□□ -2.16
SFT1YKL006C-A ERV14P53173 138 aa1.58□□□□□ -2.16
SFT1YKL006C-A BRP1P53194 125 aa1.58□□□□□ -2.16
SFT1YKL006C-A NAT5Q08689 176 aa1.58□□□□□ -2.16
SFT1YKL006C-A YOR097CQ12274 175 aaPredicted RBP1.58□□□□□ -2.16
SFT1YKL006C-A GTT2Q12390 233 aa1.58□□□□□ -2.16
SFT1YKL006C-A COA3Q3E7B2 85 aa1.58□□□□□ -2.16
SFT1YKL006C-A KTI11Q3E840 82 aa1.58□□□□□ -2.16
SFT1YKL006C-A BUD4P47136 1447 aa1.57□□□□□ -2.16
SFT1YKL006C-A CYR1P08678 2026 aaKnown RBP1.57□□□□□ -2.16
SFT1YKL006C-A PAU21P0CE86 164 aa1.57□□□□□ -2.16
SFT1YKL006C-A PAU22P0CE87 164 aa1.57□□□□□ -2.16
SFT1YKL006C-A SEC59P20048 519 aa1.57□□□□□ -2.16
SFT1YKL006C-A SNF11P38956 169 aa1.57□□□□□ -2.16
SFT1YKL006C-A YFL065CP43539 102 aa1.57□□□□□ -2.16
SFT1YKL006C-A YFL051CP43552 160 aa1.57□□□□□ -2.16
SFT1YKL006C-A YPL067CQ02754 198 aa1.57□□□□□ -2.16
SFT1YKL006C-A FYV7Q12247 151 aa1.57□□□□□ -2.16
SFT1YKL006C-A RTR2Q12378 196 aa1.57□□□□□ -2.16
SFT1YKL006C-A TRM732Q03496 1420 aa1.57□□□□□ -2.16
SFT1YKL006C-A YBR242WP38331 238 aa1.56□□□□□ -2.16
SFT1YKL006C-A HSP10P38910 106 aa1.56□□□□□ -2.16
SFT1YKL006C-A TDA2P40045 126 aa1.56□□□□□ -2.16
SFT1YKL006C-A PAM16P42949 149 aa1.56□□□□□ -2.16
SFT1YKL006C-A YFR035CP43608 114 aa1.56□□□□□ -2.16
SFT1YKL006C-A RPS12P48589 143 aaKnown RBP1.56□□□□□ -2.16
SFT1YKL006C-A GPI19Q04082 140 aa1.56□□□□□ -2.16
SFT1YKL006C-A MHF1Q3E835 90 aa1.56□□□□□ -2.16
SFT1YKL006C-A RPL40AP0CH08 128 aaKnown RBP1.55□□□□□ -2.16
SFT1YKL006C-A RPL40BP0CH09 128 aaKnown RBP1.55□□□□□ -2.16
SFT1YKL006C-A YCR101CP25607 182 aa1.55□□□□□ -2.16
SFT1YKL006C-A YCR099CP25657 155 aa1.55□□□□□ -2.16
SFT1YKL006C-A OCA6Q12454 224 aa1.55□□□□□ -2.16
SFT1YKL006C-A TSC11P40061 1430 aa1.55□□□□□ -2.16
SFT1YKL006C-A VAR1P02381 398 aa1.54□□□□□ -2.16
SFT1YKL006C-A HYP2P23301 157 aaKnown RBP1.54□□□□□ -2.16
SFT1YKL006C-A ATG8P38182 117 aaRIP-Chip data1.54□□□□□ -2.16not detected
SFT1YKL006C-A TOP2P06786 1428 aaKnown RBP1.54□□□□□ -2.16
SFT1YKL006C-A RTC6O14464 93 aa1.53□□□□□ -2.16
SFT1YKL006C-A PRE1P22141 198 aaKnown RBP1.53□□□□□ -2.16
SFT1YKL006C-A EMP24P32803 203 aaKnown RBP1.53□□□□□ -2.16
SFT1YKL006C-A YGL014C-AP0C5N1 53 aa1.52□□□□□ -2.17
SFT1YKL006C-A HAP3P13434 144 aa1.52□□□□□ -2.17
SFT1YKL006C-A UTP11P34247 250 aaPredicted RBP1.52□□□□□ -2.17
SFT1YKL006C-A MRPL11P36521 249 aaPredicted RBP1.52□□□□□ -2.17
SFT1YKL006C-A MRPL15P36523 253 aa1.52□□□□□ -2.17
SFT1YKL006C-A YBR027CP38220 110 aa1.52□□□□□ -2.17
SFT1YKL006C-A YHR130CP38834 111 aa1.52□□□□□ -2.17
SFT1YKL006C-A GNA1P43577 159 aaPredicted RBP1.52□□□□□ -2.17
SFT1YKL006C-A SED1Q01589 338 aa1.52□□□□□ -2.17
SFT1YKL006C-A FIT1Q04433 528 aa1.52□□□□□ -2.17
SFT1YKL006C-A SEN15Q04675 128 aa1.52□□□□□ -2.17
SFT1YKL006C-A YPL225WQ08971 146 aaKnown RBP1.52□□□□□ -2.17
SFT1YKL006C-A GSC2P40989 1895 aa1.52□□□□□ -2.17
SFT1YKL006C-A RPL33AP05744 107 aaKnown RBP1.51□□□□□ -2.17
SFT1YKL006C-A AQY2P0CD90 149 aa1.51□□□□□ -2.17
SFT1YKL006C-A YHR213WP0CI67 198 aa1.51□□□□□ -2.17
SFT1YKL006C-A PAU12P53343 120 aa1.51□□□□□ -2.17
SFT1YKL006C-A YLR296WQ05898 108 aa1.51□□□□□ -2.17
SFT1YKL006C-A VAM10Q08474 114 aa1.51□□□□□ -2.17
SFT1YKL006C-A YPR203WQ08994 102 aa1.51□□□□□ -2.17
SFT1YKL006C-A MED11Q99278 115 aa1.51□□□□□ -2.17
SFT1YKL006C-A PDR11P40550 1411 aa1.5□□□□□ -2.17
SFT1YKL006C-A HAP2P06774 265 aa1.5□□□□□ -2.17
SFT1YKL006C-A YHR212W-AP0CX91 67 aa1.5□□□□□ -2.17
SFT1YKL006C-A AIM4P38305 123 aaPredicted RBP1.5□□□□□ -2.17
SFT1YKL006C-A AIM18P38884 321 aa1.5□□□□□ -2.17
SFT1YKL006C-A YEA6P39953 335 aa1.5□□□□□ -2.17
SFT1YKL006C-A YER187WP40102 141 aa1.5□□□□□ -2.17
SFT1YKL006C-A YLR194CQ05777 254 aa1.5□□□□□ -2.17
SFT1YKL006C-A LST8P41318 303 aa1.49□□□□□ -2.17
SFT1YKL006C-A YIL014C-AQ02598 104 aa1.49□□□□□ -2.17
SFT1YKL006C-A YMR122CQ03879 124 aa1.49□□□□□ -2.17
SFT1YKL006C-A PRM3Q08931 133 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms