RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W GLE2P40066 365 aa3.96□□□□□ -1.78
RPB4YJL140W IMP2P46972 177 aa3.96□□□□□ -1.78
RPB4YJL140W GIS2P53849 153 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78 RIP-Chip
RPB4YJL140W APS2Q00381 147 aa3.96□□□□□ -1.78
RPB4YJL140W ARL3Q02804 198 aa3.96□□□□□ -1.78
RPB4YJL140W YMR181CQ03231 154 aa3.96□□□□□ -1.78
RPB4YJL140W SEN15Q04675 128 aa3.96□□□□□ -1.78
RPB4YJL140W SMT3Q12306 101 aaKnown RBP3.96□□□□□ -1.78
RPB4YJL140W DCN1Q12395 269 aa3.96□□□□□ -1.78
RPB4YJL140W PAU19P0CE85 124 aa3.95□□□□□ -1.78
RPB4YJL140W PAU21P0CE86 164 aa3.95□□□□□ -1.78
RPB4YJL140W PAU22P0CE87 164 aa3.95□□□□□ -1.78
RPB4YJL140W PAU3P25610 124 aa3.95□□□□□ -1.78
RPB4YJL140W PAM17P36147 197 aa3.95□□□□□ -1.78
RPB4YJL140W DAD2P36162 133 aa3.95□□□□□ -1.78
RPB4YJL140W CPD1P53314 239 aa3.95□□□□□ -1.78
RPB4YJL140W SWT21P53873 357 aaPredicted RBP3.95□□□□□ -1.78
RPB4YJL140W SDH7Q04401 133 aa3.95□□□□□ -1.78
RPB4YJL140W YOR105WQ08504 108 aa3.95□□□□□ -1.78
RPB4YJL140W MRPL23Q12487 163 aaPredicted RBP3.95□□□□□ -1.78
RPB4YJL140W YCL001W-BQ96VH2 84 aa3.95□□□□□ -1.78
RPB4YJL140W CUP2P15315 225 aa3.94□□□□□ -1.78
RPB4YJL140W INO2P26798 304 aa3.94□□□□□ -1.78
RPB4YJL140W FZF1P32805 299 aa3.94□□□□□ -1.78
RPB4YJL140W YBR144CP34215 104 aa3.94□□□□□ -1.78
RPB4YJL140W SSS1P35179 80 aa3.94□□□□□ -1.78
RPB4YJL140W PRS4P38063 326 aaPredicted RBP3.94□□□□□ -1.78
RPB4YJL140W YMR141CP40211 102 aa3.94□□□□□ -1.78
RPB4YJL140W VPS55P47111 140 aa3.94□□□□□ -1.78
RPB4YJL140W YGR149WP48236 432 aa3.94□□□□□ -1.78
RPB4YJL140W MRX11Q03079 207 aa3.94□□□□□ -1.78
RPB4YJL140W HOR7Q05827 59 aa3.94□□□□□ -1.78
RPB4YJL140W TIM18Q08749 192 aa3.94□□□□□ -1.78
RPB4YJL140W YMR230W-AQ3E7B5 62 aa3.94□□□□□ -1.78
RPB4YJL140W YNR034W-AQ3E841 98 aa3.94□□□□□ -1.78
RPB4YJL140W POR1P04840 283 aaKnown RBP3.93□□□□□ -1.78
RPB4YJL140W MRS1P07266 363 aa3.93□□□□□ -1.78
RPB4YJL140W YHR212W-AP0CX91 67 aa3.93□□□□□ -1.78
RPB4YJL140W TIR2P33890 251 aa3.93□□□□□ -1.78
RPB4YJL140W MRPL28P36527 147 aa3.93□□□□□ -1.78
RPB4YJL140W MIX23P38162 196 aa3.93□□□□□ -1.78
RPB4YJL140W SUR2P38992 349 aa3.93□□□□□ -1.78
RPB4YJL140W ATP19P81451 68 aa3.93□□□□□ -1.78
RPB4YJL140W CYT2Q00873 224 aa3.93□□□□□ -1.78
RPB4YJL140W ERG27Q12452 347 aaKnown RBP3.93□□□□□ -1.78
RPB4YJL140W HTB2P02294 131 aa3.92□□□□□ -1.78
RPB4YJL140W CYC3P06182 269 aa3.92□□□□□ -1.78
RPB4YJL140W YRA2P36036 203 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
RPB4YJL140W MBB1P39534 108 aa3.92□□□□□ -1.78
RPB4YJL140W AIM24P47127 394 aa3.92□□□□□ -1.78
RPB4YJL140W YGR025WP53216 100 aa3.92□□□□□ -1.78
RPB4YJL140W YGR219WP53307 113 aa3.92□□□□□ -1.78
RPB4YJL140W YCR024C-BQ3E7Z8 88 aa3.92□□□□□ -1.78
RPB4YJL140W DDI2P0CH63 225 aa3.91□□□□□ -1.78
RPB4YJL140W DDI3P0CH64 225 aa3.91□□□□□ -1.78
RPB4YJL140W TIR1P10863 254 aa3.91□□□□□ -1.78
RPB4YJL140W QRI5P32344 111 aa3.91□□□□□ -1.78
RPB4YJL140W IRC22P40006 225 aa3.91□□□□□ -1.78
RPB4YJL140W LCB3P47013 409 aa3.91□□□□□ -1.78
RPB4YJL140W CAB4P53332 305 aa3.91□□□□□ -1.78
RPB4YJL140W PRM3Q08931 133 aa3.91□□□□□ -1.78
RPB4YJL140W YPR013CQ12145 317 aa3.91□□□□□ -1.78
RPB4YJL140W COX2P00410 251 aa3.9□□□□□ -1.79
RPB4YJL140W POR2P40478 281 aa3.9□□□□□ -1.79
RPB4YJL140W TOS8P53147 276 aa3.9□□□□□ -1.79
RPB4YJL140W DAD4P69851 72 aa3.9□□□□□ -1.79
RPB4YJL140W CUE4Q04201 117 aaPredicted RBP3.9□□□□□ -1.79
RPB4YJL140W GIM5Q04493 163 aa3.9□□□□□ -1.79
RPB4YJL140W SEC4P07560 215 aaKnown RBP3.89□□□□□ -1.79
RPB4YJL140W RPL31BP0C2H9 113 aaKnown RBP3.89□□□□□ -1.79
RPB4YJL140W HMRA1P0CY11 126 aa3.89□□□□□ -1.79
RPB4YJL140W MRPL31P14063 131 aaPredicted RBP3.89□□□□□ -1.79
RPB4YJL140W MIC12P38341 106 aa3.89□□□□□ -1.79
RPB4YJL140W RPB11P38902 120 aa3.89□□□□□ -1.79
RPB4YJL140W YFR045WP43617 309 aa3.89□□□□□ -1.79
RPB4YJL140W SDS23P53172 527 aa3.89□□□□□ -1.79
RPB4YJL140W UBC7Q02159 165 aa3.89□□□□□ -1.79
RPB4YJL140W MSC3Q05812 728 aa3.89□□□□□ -1.79
RPB4YJL140W YOL160WQ08321 113 aa3.89□□□□□ -1.79
RPB4YJL140W YPR063CQ12160 140 aa3.89□□□□□ -1.79
RPB4YJL140W CMC2Q3E7A4 109 aa3.89□□□□□ -1.79
RPB4YJL140W YIL134C-AQ45U18 67 aa3.89□□□□□ -1.79
RPB4YJL140W MST28P39552 234 aa3.88□□□□□ -1.79
RPB4YJL140W TDA4P47153 279 aa3.88□□□□□ -1.79
RPB4YJL140W OST3P48439 350 aa3.88□□□□□ -1.79
RPB4YJL140W MST27P53176 234 aa3.88□□□□□ -1.79
RPB4YJL140W CAX4P53223 239 aa3.88□□□□□ -1.79
RPB4YJL140W DAD1Q12248 94 aa3.88□□□□□ -1.79
RPB4YJL140W MRPL20P22354 195 aaPredicted RBP3.87□□□□□ -1.79
RPB4YJL140W UTR5P32630 166 aa3.87□□□□□ -1.79
RPB4YJL140W CMC1P36064 111 aa3.87□□□□□ -1.79
RPB4YJL140W MRPL11P36521 249 aaPredicted RBP3.87□□□□□ -1.79
RPB4YJL140W AME1P38313 324 aa3.87□□□□□ -1.79
RPB4YJL140W YER134CP40081 178 aa3.87□□□□□ -1.79
RPB4YJL140W YPI1P43587 155 aa3.87□□□□□ -1.79
RPB4YJL140W YGR017WP53210 297 aa3.87□□□□□ -1.79
RPB4YJL140W GRH1Q04410 372 aaKnown RBP3.87□□□□□ -1.79
RPB4YJL140W ATG39Q06159 398 aa3.87□□□□□ -1.79
RPB4YJL140W RPS22BQ3E7Y3 130 aaKnown RBP3.87□□□□□ -1.79
RPB4YJL140W RPL23AP0CX41 137 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms