RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W KIN28P06242 306 aa1.81□□□□□ -2.12
SNX4YJL036W HYP2P23301 157 aaKnown RBP1.81□□□□□ -2.12
SNX4YJL036W QCR10P37299 77 aa1.81□□□□□ -2.12
SNX4YJL036W YBR242WP38331 238 aa1.81□□□□□ -2.12
SNX4YJL036W YGL230CP53074 147 aa1.81□□□□□ -2.12
SNX4YJL036W VAM10Q08474 114 aa1.81□□□□□ -2.12
SNX4YJL036W NAT5Q08689 176 aa1.81□□□□□ -2.12
SNX4YJL036W SAE3P89114 91 aa1.8□□□□□ -2.12
SNX4YJL036W FIT1Q04433 528 aa1.8□□□□□ -2.12
SNX4YJL036W YHR212W-AP0CX91 67 aa1.79□□□□□ -2.12
SNX4YJL036W MDS3P53094 1487 aa1.78□□□□□ -2.12
SNX4YJL036W UGX2P32772 223 aa1.78□□□□□ -2.12
SNX4YJL036W MRPL15P36523 253 aa1.78□□□□□ -2.12
SNX4YJL036W DCV1P43595 202 aa1.78□□□□□ -2.12
SNX4YJL036W BRP1P53194 125 aa1.78□□□□□ -2.12
SNX4YJL036W YBR027CP38220 110 aa1.77□□□□□ -2.13
SNX4YJL036W PAU21P0CE86 164 aa1.76□□□□□ -2.13
SNX4YJL036W PAU22P0CE87 164 aa1.76□□□□□ -2.13
SNX4YJL036W FUN14P18411 198 aa1.76□□□□□ -2.13
SNX4YJL036W SED1Q01589 338 aa1.76□□□□□ -2.13
SNX4YJL036W YPL067CQ02754 198 aa1.76□□□□□ -2.13
SNX4YJL036W ARL3Q02804 198 aa1.76□□□□□ -2.13
SNX4YJL036W AIM36Q03798 255 aa1.76□□□□□ -2.13
SNX4YJL036W BEM2P39960 2167 aaKnown RBP1.76□□□□□ -2.13
SNX4YJL036W AQY2P0CD90 149 aa1.75□□□□□ -2.13
SNX4YJL036W NMT1P14743 455 aa1.75□□□□□ -2.13
SNX4YJL036W YFL051CP43552 160 aa1.75□□□□□ -2.13
SNX4YJL036W YGL149WP53116 101 aa1.75□□□□□ -2.13
SNX4YJL036W CDC39P25655 2108 aaKnown RBP1.75□□□□□ -2.13
SNX4YJL036W YOR304C-AO14468 76 aa1.74□□□□□ -2.13
SNX4YJL036W RPL33AP05744 107 aaKnown RBP1.74□□□□□ -2.13
SNX4YJL036W SRL3P36167 246 aa1.74□□□□□ -2.13
SNX4YJL036W RPB11P38902 120 aa1.74□□□□□ -2.13
SNX4YJL036W HSP10P38910 106 aa1.74□□□□□ -2.13
SNX4YJL036W ERV14P53173 138 aa1.74□□□□□ -2.13
SNX4YJL036W LDB18Q07887 179 aa1.74□□□□□ -2.13
SNX4YJL036W YOR376W-AQ3E805 51 aa1.74□□□□□ -2.13
SNX4YJL036W MHF1Q3E835 90 aa1.74□□□□□ -2.13
SNX4YJL036W YGL014C-AP0C5N1 53 aa1.73□□□□□ -2.13
SNX4YJL036W HAP3P13434 144 aa1.73□□□□□ -2.13
SNX4YJL036W ANB1P19211 157 aa1.73□□□□□ -2.13
SNX4YJL036W YHL037CP38733 133 aa1.73□□□□□ -2.13
SNX4YJL036W YPR203WQ08994 102 aa1.73□□□□□ -2.13
SNX4YJL036W KTI11Q3E840 82 aa1.73□□□□□ -2.13
SNX4YJL036W SPP41P38904 1435 aa1.73□□□□□ -2.13
SNX4YJL036W TRM732Q03496 1420 aa1.73□□□□□ -2.13
SNX4YJL036W SEC59P20048 519 aa1.72□□□□□ -2.13
SNX4YJL036W YKL044WP36092 106 aa1.72□□□□□ -2.13
SNX4YJL036W ATG8P38182 117 aaRIP-Chip data1.72□□□□□ -2.13not detected
SNX4YJL036W RUB1Q03919 77 aa1.72□□□□□ -2.13
SNX4YJL036W YLR296WQ05898 108 aa1.72□□□□□ -2.13
SNX4YJL036W FCF2Q12035 217 aaPredicted RBP1.72□□□□□ -2.13
SNX4YJL036W GTT2Q12390 233 aa1.72□□□□□ -2.13
SNX4YJL036W ADK1P07170 222 aaKnown RBP1.71□□□□□ -2.14
SNX4YJL036W YHR213WP0CI67 198 aa1.71□□□□□ -2.14
SNX4YJL036W MRPL11P36521 249 aaPredicted RBP1.71□□□□□ -2.14
SNX4YJL036W YOR097CQ12274 175 aaPredicted RBP1.71□□□□□ -2.14
SNX4YJL036W RTC6O14464 93 aa1.7□□□□□ -2.14
SNX4YJL036W VAR1P02381 398 aa1.7□□□□□ -2.14
SNX4YJL036W RPL40AP0CH08 128 aaKnown RBP1.69□□□□□ -2.14
SNX4YJL036W RPL40BP0CH09 128 aaKnown RBP1.69□□□□□ -2.14
SNX4YJL036W YCR099CP25657 155 aa1.69□□□□□ -2.14
SNX4YJL036W LST8P41318 303 aa1.69□□□□□ -2.14
SNX4YJL036W YFR035CP43608 114 aa1.69□□□□□ -2.14
SNX4YJL036W SEN15Q04675 128 aa1.69□□□□□ -2.14
SNX4YJL036W YLR042CQ07990 161 aa1.69□□□□□ -2.14
SNX4YJL036W YER039C-AP0CD97 72 aa1.68□□□□□ -2.14
SNX4YJL036W SNF11P38956 169 aa1.68□□□□□ -2.14
SNX4YJL036W YAR064WP39563 99 aa1.68□□□□□ -2.14
SNX4YJL036W YMR122CQ03879 124 aa1.68□□□□□ -2.14
SNX4YJL036W GPI19Q04082 140 aa1.68□□□□□ -2.14
SNX4YJL036W PFY1P07274 126 aa1.67□□□□□ -2.14
SNX4YJL036W UTP11P34247 250 aaPredicted RBP1.67□□□□□ -2.14
SNX4YJL036W YAR029WP39549 74 aa1.67□□□□□ -2.14
SNX4YJL036W RTR2Q12378 196 aa1.67□□□□□ -2.14
SNX4YJL036W RPL36BO14455 100 aaKnown RBP1.66□□□□□ -2.14
SNX4YJL036W RPL36AP05745 100 aaPredicted RBP1.66□□□□□ -2.14
SNX4YJL036W GSP1P32835 219 aaKnown RBP1.66□□□□□ -2.14
SNX4YJL036W AIM18P38884 321 aa1.66□□□□□ -2.14
SNX4YJL036W PAM16P42949 149 aa1.66□□□□□ -2.14
SNX4YJL036W PRM3Q08931 133 aa1.66□□□□□ -2.14
SNX4YJL036W SNT2P53127 1403 aa1.66□□□□□ -2.14
SNX4YJL036W YJL197C-AP0C5P0 93 aa1.65□□□□□ -2.15
SNX4YJL036W LHP1P33399 275 aaKnown RBP1.65□□□□□ -2.15
SNX4YJL036W TDA2P40045 126 aa1.65□□□□□ -2.15
SNX4YJL036W YER137CP40083 148 aaKnown RBP1.65□□□□□ -2.15
SNX4YJL036W YNL122CP53921 115 aaPredicted RBP1.65□□□□□ -2.15
SNX4YJL036W IRC21Q04772 201 aa1.65□□□□□ -2.15
SNX4YJL036W GSC2P40989 1895 aa1.65□□□□□ -2.15
SNX4YJL036W RGI1P40043 161 aaPredicted RBP1.64□□□□□ -2.15
SNX4YJL036W COA4Q05809 96 aa1.64□□□□□ -2.15
SNX4YJL036W EMP24P32803 203 aaKnown RBP1.63□□□□□ -2.15
SNX4YJL036W YJL009WP47078 108 aa1.63□□□□□ -2.15
SNX4YJL036W CCW12Q12127 133 aa1.63□□□□□ -2.15
SNX4YJL036W HAP2P06774 265 aa1.62□□□□□ -2.15
SNX4YJL036W AIM4P38305 123 aaPredicted RBP1.62□□□□□ -2.15
SNX4YJL036W YER187WP40102 141 aa1.62□□□□□ -2.15
SNX4YJL036W YIL102CP40488 101 aa1.62□□□□□ -2.15
SNX4YJL036W RPS12P48589 143 aaKnown RBP1.62□□□□□ -2.15
SNX4YJL036W YMR007WQ03675 126 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms