RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	RAD23	P32628	398 aa	Known RBP	3.13	□□□□□ -1.91
RPB3	YIL021W	MRPL24	P36525	258 aa	Predicted RBP	3.13	□□□□□ -1.91
RPB3	YIL021W	PIR5	P46999	287 aa		3.13	□□□□□ -1.91
RPB3	YIL021W	YJL118W	P47022	219 aa		3.13	□□□□□ -1.91
RPB3	YIL021W	CRZ1	P53968	678 aa		3.13	□□□□□ -1.91
RPB3	YIL021W	GAT3	Q07928	141 aa		3.13	□□□□□ -1.91
RPB3	YIL021W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.13	□□□□□ -1.91
RPB3	YIL021W	FMP27	Q06179	2628 aa		3.13	□□□□□ -1.91
RPB3	YIL021W	SOD1	P00445	154 aa	Known RBP	3.12	□□□□□ -1.91
RPB3	YIL021W	RPL39	P04650	51 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	HMRA1	P0CY11	126 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	MIG1	P27705	504 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	QRI5	P32344	111 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	MTR2	P34232	184 aa	Known RBP	3.12	□□□□□ -1.91
RPB3	YIL021W	SOR1	P35497	357 aa	Known RBP	3.12	□□□□□ -1.91
RPB3	YIL021W	PAU16	P35994	123 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	DOG2	P38773	246 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	YHR173C	P38864	112 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	YER085C	P40058	173 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	RPA43	P46669	326 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	CPD1	P53314	239 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	ATP19	P81451	68 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	SOR2	Q07786	357 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	YOL024W	Q08172	172 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	YDL157C	Q12082	118 aa		3.12	□□□□□ -1.91
RPB3	YIL021W	TPT1	Q12272	230 aa	Known RBP	3.12	□□□□□ -1.91
RPB3	YIL021W	CUP2	P15315	225 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	UGX2	P32772	223 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	PAM17	P36147	197 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	YBL071C	P38185	102 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	CSH1	P38287	376 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	PRE5	P40302	234 aa	Known RBP	3.11	□□□□□ -1.91
RPB3	YIL021W	CDC40	P40968	455 aa	Predicted RBP	3.11	□□□□□ -1.91
RPB3	YIL021W	YFL051C	P43552	160 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	DUG3	P53871	357 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	SUR7	P54003	302 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	IZH1	Q03419	316 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	API2	Q04413	109 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	FIT2	Q08906	153 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	YOR029W	Q12243	111 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	YCR024C-B	Q3E7Z8	88 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	YMR105W-A	Q8TGS8	64 aa		3.11	□□□□□ -1.91
RPB3	YIL021W	CMC1	P36064	111 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	ECM33	P38248	429 aa	Known RBP	3.1	□□□□□ -1.91
RPB3	YIL021W	YBR090C	P38253	122 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	YGP1	P38616	354 aa	Known RBP	3.1	□□□□□ -1.91
RPB3	YIL021W	YHL037C	P38733	133 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	YHR130C	P38834	111 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	YER134C	P40081	178 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
RPB3	YIL021W	MSL1	P40567	111 aa	Predicted RBP	3.1	□□□□□ -1.91
RPB3	YIL021W	YNR064C	P53750	290 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	YNL046W	P53956	172 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	SED1	Q01589	338 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	MRX11	Q03079	207 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	RAV2	Q03956	351 aa		3.1	□□□□□ -1.91
RPB3	YIL021W	YTH1	Q06102	208 aa	Predicted RBP	3.1	□□□□□ -1.91
RPB3	YIL021W	YLR050C	Q12155	161 aa	Known RBP	3.1	□□□□□ -1.91
RPB3	YIL021W	MRS1	P07266	363 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	RPS28B	P0C0X0	67 aa	Known RBP	3.09	□□□□□ -1.91
RPB3	YIL021W	HYP2	P23301	157 aa	Known RBP	3.09	□□□□□ -1.91
RPB3	YIL021W	YCR022C	P25620	114 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	ZRT1	P32804	376 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	SFT2	P38166	215 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	FYV4	P38783	130 aa	Predicted RBP	3.09	□□□□□ -1.91
RPB3	YIL021W	YER121W	P40076	114 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	LST8	P41318	303 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	TDA4	P47153	279 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	YGR018C	P53211	109 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	TOM7	P53507	60 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	HST4	P53688	370 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	YML079W	Q03629	201 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	DPP1	Q05521	289 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	YDL218W	Q07629	317 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	YPL162C	Q12042	273 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.09	□□□□□ -1.91
RPB3	YIL021W	ISD11	Q6Q560	94 aa		3.09	□□□□□ -1.91
RPB3	YIL021W	IRA2	P19158	3079 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	TRA1	P38811	3744 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	VAR1	P02381	398 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	YBR121C-A	P0C5L4	52 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	ADH5	P38113	351 aa	Known RBP	3.08	□□□□□ -1.92
RPB3	YIL021W	CTR2	P38865	189 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	TEM1	P38987	245 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	OXA1	P39952	402 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	YGL230C	P53074	147 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	YGL118C	P53132	145 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	PRM3	Q08931	133 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	YDL009C	Q12210	107 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	YLR363W-A	Q3E747	85 aa		3.08	□□□□□ -1.92
RPB3	YIL021W	YER145C-A	A0A023PYF4	145 aa		3.07	□□□□□ -1.92
RPB3	YIL021W	ADH1	P00330	348 aa	Known RBP	3.07	□□□□□ -1.92
RPB3	YIL021W	RAD6	P06104	172 aa		3.07	□□□□□ -1.92
RPB3	YIL021W	INO4	P13902	151 aa		3.07	□□□□□ -1.92
RPB3	YIL021W	MRPL31	P14063	131 aa	Predicted RBP	3.07	□□□□□ -1.92
RPB3	YIL021W	COX10	P21592	462 aa		3.07	□□□□□ -1.92
RPB3	YIL021W	IES6	P32617	166 aa		3.07	□□□□□ -1.92
RPB3	YIL021W	FZF1	P32805	299 aa		3.07	□□□□□ -1.92
RPB3	YIL021W	RRT1	P38192	103 aa		3.07	□□□□□ -1.92
RPB3	YIL021W	ECM14	P38836	430 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 108.7 ms