RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C GAA1P39012 614 aa1.33□□□□□ -2.2
PGD1YGL025C IRC22P40006 225 aa1.33□□□□□ -2.2
PGD1YGL025C RPL13BP40212 199 aaKnown RBP1.33□□□□□ -2.2
PGD1YGL025C APQ12P40532 138 aa1.33□□□□□ -2.2
PGD1YGL025C ARP3P47117 449 aaKnown RBP1.33□□□□□ -2.2
PGD1YGL025C LSM7P53905 115 aaKnown RBP1.33□□□□□ -2.2
PGD1YGL025C VPS28Q02767 242 aa1.33□□□□□ -2.2
PGD1YGL025C GRX5Q02784 150 aa1.33□□□□□ -2.2
PGD1YGL025C YMR099CQ03161 297 aaKnown RBP1.33□□□□□ -2.2
PGD1YGL025C VPS71Q03433 280 aa1.33□□□□□ -2.2
PGD1YGL025C MAK3Q03503 176 aa1.33□□□□□ -2.2
PGD1YGL025C RAV2Q03956 351 aa1.33□□□□□ -2.2
PGD1YGL025C CUE4Q04201 117 aaPredicted RBP1.33□□□□□ -2.2
PGD1YGL025C SPG3Q04398 127 aaPredicted RBP1.33□□□□□ -2.2
PGD1YGL025C YOL131WQ08270 108 aa1.33□□□□□ -2.2
PGD1YGL025C YOL160WQ08321 113 aa1.33□□□□□ -2.2
PGD1YGL025C FCF2Q12035 217 aaPredicted RBP1.33□□□□□ -2.2
PGD1YGL025C YLR050CQ12155 161 aaKnown RBP1.33□□□□□ -2.2
PGD1YGL025C VMA9Q3E7B6 73 aa1.33□□□□□ -2.2
PGD1YGL025C PCC1Q3E833 88 aa1.33□□□□□ -2.2
PGD1YGL025C YNR034W-AQ3E841 98 aa1.33□□□□□ -2.2
PGD1YGL025C YIL134C-AQ45U18 67 aa1.33□□□□□ -2.2
PGD1YGL025C UBR1P19812 1950 aa1.33□□□□□ -2.2
PGD1YGL025C BPT1P14772 1559 aa1.33□□□□□ -2.2
PGD1YGL025C TY3B-IQ7LHG5 1498 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C SIR2P06700 562 aa1.32□□□□□ -2.2
PGD1YGL025C CPA1P07258 411 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C MRS1P07266 363 aa1.32□□□□□ -2.2
PGD1YGL025C SEC4P07560 215 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C RPB3P16370 318 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C CKS1P20486 150 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C HYP2P23301 157 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C SPC25P40014 221 aa1.32□□□□□ -2.2
PGD1YGL025C HMF1P40037 129 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C GAT4P40569 121 aa1.32□□□□□ -2.2
PGD1YGL025C AIM25P47140 327 aa1.32□□□□□ -2.2
PGD1YGL025C BOL2P53082 120 aa1.32□□□□□ -2.2
PGD1YGL025C YGL101WP53144 215 aa1.32□□□□□ -2.2
PGD1YGL025C HHT1P61830 136 aa1.32□□□□□ -2.2
PGD1YGL025C PET191Q02772 108 aa1.32□□□□□ -2.2
PGD1YGL025C COF1Q03048 143 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C THI74Q04083 370 aa1.32□□□□□ -2.2
PGD1YGL025C HPT1Q04178 221 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C POC4Q12245 148 aaPredicted RBP1.32□□□□□ -2.2
PGD1YGL025C HUT1Q12520 339 aa1.32□□□□□ -2.2
PGD1YGL025C YLR412C-AQ3E742 68 aa1.32□□□□□ -2.2
PGD1YGL025C YNL277W-AQ3E7Z0 62 aa1.32□□□□□ -2.2
PGD1YGL025C YHR214C-EQ8TGK0 99 aa1.32□□□□□ -2.2
PGD1YGL025C DDP1Q99321 188 aaKnown RBP1.32□□□□□ -2.2
PGD1YGL025C MLP1Q02455 1875 aaKnown RBP1.31□□□□□ -2.2
PGD1YGL025C FMP49A0A023PZB3 126 aa1.31□□□□□ -2.2
PGD1YGL025C YLR156WP0CE96 114 aa1.31□□□□□ -2.2
PGD1YGL025C YLR159WP0CE97 114 aa1.31□□□□□ -2.2
PGD1YGL025C YLR161WP0CE98 114 aa1.31□□□□□ -2.2
PGD1YGL025C BET1P22804 142 aa1.31□□□□□ -2.2
PGD1YGL025C ATG8P38182 117 aaRIP-Chip data1.31□□□□□ -2.2not detected
PGD1YGL025C NSG1P38837 291 aa1.31□□□□□ -2.2
PGD1YGL025C YEA4P40004 342 aa1.31□□□□□ -2.2
PGD1YGL025C YNL198CP40166 100 aa1.31□□□□□ -2.2
PGD1YGL025C CUP9P41817 306 aa1.31□□□□□ -2.2
PGD1YGL025C YFL065CP43539 102 aa1.31□□□□□ -2.2
PGD1YGL025C TTI2P47168 421 aa1.31□□□□□ -2.2
PGD1YGL025C SBH1P52870 82 aa1.31□□□□□ -2.2
PGD1YGL025C AIM11P87275 137 aa1.31□□□□□ -2.2
PGD1YGL025C RCE1Q03530 315 aa1.31□□□□□ -2.2
PGD1YGL025C CNL1Q06333 122 aa1.31□□□□□ -2.2
PGD1YGL025C YLR042CQ07990 161 aa1.31□□□□□ -2.2
PGD1YGL025C NAT5Q08689 176 aa1.31□□□□□ -2.2
PGD1YGL025C YPR203WQ08994 102 aa1.31□□□□□ -2.2
PGD1YGL025C YPL162CQ12042 273 aa1.31□□□□□ -2.2
PGD1YGL025C YOR097CQ12274 175 aaPredicted RBP1.31□□□□□ -2.2
PGD1YGL025C KSH1Q8TGJ3 72 aa1.31□□□□□ -2.2
PGD1YGL025C MSB2P32334 1306 aa1.31□□□□□ -2.2
PGD1YGL025C NUP188P52593 1655 aaKnown RBP1.3□□□□□ -2.2
PGD1YGL025C DOP1Q03921 1698 aa1.3□□□□□ -2.2
PGD1YGL025C URA5P13298 226 aaKnown RBP1.3□□□□□ -2.2
PGD1YGL025C PHO85P17157 305 aa1.3□□□□□ -2.2
PGD1YGL025C MGT1P26188 188 aa1.3□□□□□ -2.2
PGD1YGL025C MRP17P28778 131 aa1.3□□□□□ -2.2
PGD1YGL025C TMA19P35691 167 aaKnown RBP1.3□□□□□ -2.2
PGD1YGL025C HPA3P39979 161 aa1.3□□□□□ -2.2
PGD1YGL025C YER134CP40081 178 aa1.3□□□□□ -2.2
PGD1YGL025C SWM2P40342 146 aa1.3□□□□□ -2.2
PGD1YGL025C DLS1P40366 167 aa1.3□□□□□ -2.2
PGD1YGL025C YJL218WP40892 196 aaKnown RBP1.3□□□□□ -2.2
PGD1YGL025C YGR050CP53231 118 aa1.3□□□□□ -2.2
PGD1YGL025C YGR164WP53291 111 aa1.3□□□□□ -2.2
PGD1YGL025C EST3Q03096 181 aa1.3□□□□□ -2.2
PGD1YGL025C YMR103CQ04436 120 aa1.3□□□□□ -2.2
PGD1YGL025C NKP2Q06162 153 aa1.3□□□□□ -2.2
PGD1YGL025C YDR119W-AQ2V2P9 66 aa1.3□□□□□ -2.2
PGD1YGL025C YMR175W-AQ3E766 64 aa1.3□□□□□ -2.2
PGD1YGL025C TSC3Q3E790 80 aa1.3□□□□□ -2.2
PGD1YGL025C POR1P04840 283 aaKnown RBP1.29□□□□□ -2.2
PGD1YGL025C RPS25BP0C0T4 108 aaKnown RBP1.29□□□□□ -2.2
PGD1YGL025C PBI2P0CT04 75 aaKnown RBP1.29□□□□□ -2.2
PGD1YGL025C SNF4P12904 322 aa1.29□□□□□ -2.2
PGD1YGL025C RPL30P14120 105 aaKnown RBP1.29□□□□□ -2.2
PGD1YGL025C MRS4P23500 304 aa1.29□□□□□ -2.2
PGD1YGL025C FZF1P32805 299 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms