RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	TY1B-JR1	P47098	1755 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-ML2	Q03434	1755 aa	Known RBP	3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-ER1	Q03612	1755 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-ML1	Q04711	1755 aa	Known RBP	3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-GR2	Q12269	1755 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-OL	Q12273	1755 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-PL	Q12414	1755 aa	Known RBP	3.1	□□□□□ -1.91
UBP6	YFR010W	XRN1	P22147	1528 aa	Known RBP	3.1	□□□□□ -1.91
UBP6	YFR010W	STF2	P16965	84 aa		3.09	□□□□□ -1.91
UBP6	YFR010W	CYB5	P40312	120 aa		3.09	□□□□□ -1.91
UBP6	YFR010W	YFL065C	P43539	102 aa		3.09	□□□□□ -1.91
UBP6	YFR010W	IGD1	P43598	195 aa		3.09	□□□□□ -1.91
UBP6	YFR010W	ATP19	P81451	68 aa		3.09	□□□□□ -1.91
UBP6	YFR010W	YPR203W	Q08994	102 aa		3.09	□□□□□ -1.91
UBP6	YFR010W	NUP159	P40477	1460 aa		3.09	□□□□□ -1.92
UBP6	YFR010W	FUN14	P18411	198 aa		3.09	□□□□□ -1.92
UBP6	YFR010W	QCR10	P37299	77 aa		3.09	□□□□□ -1.92
UBP6	YFR010W	PTH1	P38876	190 aa	Known RBP	3.09	□□□□□ -1.92
UBP6	YFR010W	GPI19	Q04082	140 aa		3.09	□□□□□ -1.92
UBP6	YFR010W	YAL067W-A	Q8TGK6	75 aa		3.09	□□□□□ -1.92
UBP6	YFR010W	YCL021W-A	Q96VH3	125 aa		3.09	□□□□□ -1.92
UBP6	YFR010W	SEC7	P11075	2009 aa	Known RBP	3.08	□□□□□ -1.92
UBP6	YFR010W	SMC4	Q12267	1418 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	TY1B-GR3	Q12316	1755 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	TY1B-OR	Q92393	1755 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	FYV5	P25585	152 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	MIG1	P27705	504 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	YEL045C	P32616	141 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	RRT13	P40042	185 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	ELP6	Q04868	273 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	SOM1	Q05676	74 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	YER078W-A	Q3E7A2	54 aa		3.08	□□□□□ -1.92
UBP6	YFR010W	MIG3	P39943	394 aa		3.07	□□□□□ -1.92
UBP6	YFR010W	PEP8	P40335	379 aa		3.07	□□□□□ -1.92
UBP6	YFR010W	YHP1	Q04116	353 aa		3.07	□□□□□ -1.92
UBP6	YFR010W	MIX14	Q04341	121 aa		3.07	□□□□□ -1.92
UBP6	YFR010W	PBA1	Q05778	276 aa		3.07	□□□□□ -1.92
UBP6	YFR010W	YLR296W	Q05898	108 aa		3.07	□□□□□ -1.92
UBP6	YFR010W	PAI3	P01094	68 aa		3.06	□□□□□ -1.92
UBP6	YFR010W	COX4	P04037	155 aa		3.06	□□□□□ -1.92
UBP6	YFR010W	YCR043C	P25361	127 aa		3.06	□□□□□ -1.92
UBP6	YFR010W	FZF1	P32805	299 aa		3.06	□□□□□ -1.92
UBP6	YFR010W	REE1	P40893	198 aa		3.06	□□□□□ -1.92
UBP6	YFR010W	SMD3	P43321	101 aa	Known RBP	3.06	□□□□□ -1.92
UBP6	YFR010W	RRT15	Q3E811	62 aa		3.06	□□□□□ -1.92
UBP6	YFR010W	HAP1	P0CE41	1502 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	DNA2	P38859	1522 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	SWR1	Q05471	1514 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	MMS1	Q06211	1407 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	YHR032W-A	P0C5N6	59 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	SSS1	P35179	80 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	NRG2	P38082	220 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	YHL018W	P38744	120 aa	Predicted RBP	3.05	□□□□□ -1.92
UBP6	YFR010W	HUR1	P45820	110 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	RSM19	P53733	91 aa	Predicted RBP	3.05	□□□□□ -1.92
UBP6	YFR010W	PPT2	Q12036	173 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	YBR298C-A	Q8TGK4	73 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	YPK9	Q12697	1472 aa		3.05	□□□□□ -1.92
UBP6	YFR010W	FAS2	P19097	1887 aa	Known RBP	3.05	□□□□□ -1.92
UBP6	YFR010W	SRB8	P25648	1427 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	YCR085W	P25650	117 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	GRX5	Q02784	150 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	YDL241W	Q07738	123 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	IRC19	Q07843	230 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	IRC23	Q08416	157 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	YOR015W	Q12169	119 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	MYO4	P32492	1471 aa		3.04	□□□□□ -1.92
UBP6	YFR010W	MDM35	O60200	86 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	YBL059W	P34224	193 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	SVP26	P38869	228 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	YER187W	P40102	141 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	VMA21	P41806	77 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	SUS1	Q6WNK7	96 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	FLO11	P08640	1367 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	RPA190	P10964	1664 aa	Known RBP	3.03	□□□□□ -1.92
UBP6	YFR010W	RPS25B	P0C0T4	108 aa	Known RBP	3.03	□□□□□ -1.92
UBP6	YFR010W	MID2	P36027	376 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	YHR138C	P38841	114 aa	Predicted RBP	3.03	□□□□□ -1.92
UBP6	YFR010W	IGO1	P53897	168 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	YDR042C	Q03205	200 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	PRM3	Q08931	133 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	POC4	Q12245	148 aa	Predicted RBP	3.03	□□□□□ -1.92
UBP6	YFR010W	EMC6	Q12431	108 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	MHF1	Q3E835	90 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	YOL085C	Q99345	113 aa		3.03	□□□□□ -1.92
UBP6	YFR010W	ROM2	P51862	1356 aa	Known RBP	3.02	□□□□□ -1.93
UBP6	YFR010W	AUS1	Q08409	1394 aa		3.02	□□□□□ -1.93
UBP6	YFR010W	MMS22	Q06164	1454 aa		3.02	□□□□□ -1.93
UBP6	YFR010W	YKR045C	P36138	183 aa		3.02	□□□□□ -1.93
UBP6	YFR010W	SNN1	P48232	102 aa		3.02	□□□□□ -1.93
UBP6	YFR010W	DAD1	Q12248	94 aa		3.02	□□□□□ -1.93
UBP6	YFR010W	YLR363W-A	Q3E747	85 aa		3.02	□□□□□ -1.93
UBP6	YFR010W	SIN3	P22579	1536 aa		3.01	□□□□□ -1.93
UBP6	YFR010W	MON2	P48563	1636 aa	Predicted RBP	3.01	□□□□□ -1.93
UBP6	YFR010W	SWM2	P40342	146 aa		3.01	□□□□□ -1.93
UBP6	YFR010W	HYR1	P40581	163 aa	Known RBP	3.01	□□□□□ -1.93
UBP6	YFR010W	YML079W	Q03629	201 aa		3.01	□□□□□ -1.93
UBP6	YFR010W	YPL261C	Q08976	102 aa		3.01	□□□□□ -1.93
UBP6	YFR010W	TY1B-JR2	P47100	1755 aa	Known RBP	3.01	□□□□□ -1.93
UBP6	YFR010W	TY1B-ER2	Q03619	1755 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms