RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W ADD37Q03233 198 aa1.31□□□□□ -2.2
CFT1YDR301W BET5Q03630 159 aa1.31□□□□□ -2.2
CFT1YDR301W UPS3Q04006 179 aa1.31□□□□□ -2.2
CFT1YDR301W MSA1Q08471 629 aa1.31□□□□□ -2.2
CFT1YDR301W JID1Q12350 301 aa1.31□□□□□ -2.2
CFT1YDR301W VAR1P02381 398 aa1.31□□□□□ -2.2
CFT1YDR301W PHD1P36093 366 aa1.31□□□□□ -2.2
CFT1YDR301W FYV6P53913 173 aa1.31□□□□□ -2.2
CFT1YDR301W LOA1Q06508 300 aa1.31□□□□□ -2.2
CFT1YDR301W PAU19P0CE85 124 aa1.31□□□□□ -2.2
CFT1YDR301W PAU21P0CE86 164 aa1.31□□□□□ -2.2
CFT1YDR301W PAU22P0CE87 164 aa1.31□□□□□ -2.2
CFT1YDR301W SPO13P23624 291 aa1.31□□□□□ -2.2
CFT1YDR301W PAU3P25610 124 aa1.31□□□□□ -2.2
CFT1YDR301W YKL070WP36087 169 aa1.31□□□□□ -2.2
CFT1YDR301W YCH1P42937 148 aa1.31□□□□□ -2.2
CFT1YDR301W LCB3P47013 409 aa1.31□□□□□ -2.2
CFT1YDR301W FCY1Q12178 158 aa1.31□□□□□ -2.2
CFT1YDR301W PAA1Q12447 191 aaKnown RBP1.31□□□□□ -2.2
CFT1YDR301W BPH1P25356 2167 aa1.31□□□□□ -2.2
CFT1YDR301W RPB3P16370 318 aaKnown RBP1.3□□□□□ -2.2
CFT1YDR301W COQ3P27680 312 aa1.3□□□□□ -2.2
CFT1YDR301W YER085CP40058 173 aa1.3□□□□□ -2.2
CFT1YDR301W GTT1P40582 234 aa1.3□□□□□ -2.2
CFT1YDR301W YAR1P46683 200 aa1.3□□□□□ -2.2
CFT1YDR301W DSK2P48510 373 aa1.3□□□□□ -2.2
CFT1YDR301W IZH1Q03419 316 aa1.3□□□□□ -2.2
CFT1YDR301W ARC18Q05933 178 aaKnown RBP1.3□□□□□ -2.2
CFT1YDR301W CSM4Q08955 156 aa1.3□□□□□ -2.2
CFT1YDR301W YPR013CQ12145 317 aa1.3□□□□□ -2.2
CFT1YDR301W YOR015WQ12169 119 aa1.3□□□□□ -2.2
CFT1YDR301W RPS22BQ3E7Y3 130 aaKnown RBP1.3□□□□□ -2.2
CFT1YDR301W PAU5P43575 122 aa1.3□□□□□ -2.2
CFT1YDR301W DAN1P47178 298 aa1.3□□□□□ -2.2
CFT1YDR301W TOS8P53147 276 aa1.3□□□□□ -2.2
CFT1YDR301W BRP1P53194 125 aa1.3□□□□□ -2.2
CFT1YDR301W YDR274CP87283 123 aa1.3□□□□□ -2.2
CFT1YDR301W SNU23Q12368 194 aaPredicted RBP1.3□□□□□ -2.2
CFT1YDR301W CMC2Q3E7A4 109 aa1.3□□□□□ -2.2
CFT1YDR301W MIX23P38162 196 aa1.3□□□□□ -2.2
CFT1YDR301W MCM22P47167 239 aa1.3□□□□□ -2.2
CFT1YDR301W MRPS8Q03799 155 aa1.3□□□□□ -2.2
CFT1YDR301W YMR316C-AI2HB70 103 aa1.3□□□□□ -2.2
CFT1YDR301W ELO2P25358 347 aa1.3□□□□□ -2.2
CFT1YDR301W HOT13P36078 116 aa1.3□□□□□ -2.2
CFT1YDR301W RIB5P38145 238 aa1.3□□□□□ -2.2
CFT1YDR301W LSM2P38203 95 aaKnown RBP1.3□□□□□ -2.2
CFT1YDR301W YHR022CP38763 256 aa1.3□□□□□ -2.2
CFT1YDR301W COX14P39103 70 aa1.3□□□□□ -2.2
CFT1YDR301W KEG1P43614 200 aa1.3□□□□□ -2.2
CFT1YDR301W YIP3P53633 176 aa1.3□□□□□ -2.2
CFT1YDR301W APS2Q00381 147 aa1.3□□□□□ -2.2
CFT1YDR301W SNO1Q03144 224 aa1.3□□□□□ -2.2
CFT1YDR301W YMR244WQ04018 355 aa1.3□□□□□ -2.2
CFT1YDR301W GIM5Q04493 163 aa1.3□□□□□ -2.2
CFT1YDR301W ZEO1Q08245 113 aa1.3□□□□□ -2.2
CFT1YDR301W SME1Q12330 94 aaPredicted RBP1.3□□□□□ -2.2
CFT1YDR301W MEC1P38111 2368 aa1.29□□□□□ -2.2
CFT1YDR301W FMP49A0A023PZB3 126 aa1.29□□□□□ -2.2
CFT1YDR301W RPS11AP0CX47 156 aaKnown RBP1.29□□□□□ -2.2
CFT1YDR301W RPS11BP0CX48 156 aaKnown RBP1.29□□□□□ -2.2
CFT1YDR301W YHR212W-AP0CX91 67 aa1.29□□□□□ -2.2
CFT1YDR301W NTF2P33331 125 aaKnown RBP1.29□□□□□ -2.2
CFT1YDR301W RPL14AP36105 138 aaKnown RBP1.29□□□□□ -2.2
CFT1YDR301W ATG8P38182 117 aaRIP-Chip data1.29□□□□□ -2.2not detected
CFT1YDR301W RPL14BP38754 138 aaKnown RBP1.29□□□□□ -2.2
CFT1YDR301W LSM4P40070 187 aaKnown RBP1.29□□□□□ -2.2
CFT1YDR301W UBC7Q02159 165 aa1.29□□□□□ -2.2
CFT1YDR301W TIR2P33890 251 aa1.29□□□□□ -2.2
CFT1YDR301W YCR041WP37265 110 aa1.29□□□□□ -2.2
CFT1YDR301W ALG13P53178 202 aa1.29□□□□□ -2.2
CFT1YDR301W YGR026WP53217 278 aa1.29□□□□□ -2.2
CFT1YDR301W YDR366CP87287 132 aa1.29□□□□□ -2.2
CFT1YDR301W YLR042CQ07990 161 aa1.29□□□□□ -2.2
CFT1YDR301W YOL160WQ08321 113 aa1.29□□□□□ -2.2
CFT1YDR301W ATP16Q12165 160 aa1.29□□□□□ -2.2
CFT1YDR301W TAR1Q8TGM6 124 aa1.29□□□□□ -2.2
CFT1YDR301W AQY1P0CD91 305 aa1.29□□□□□ -2.2
CFT1YDR301W MRPL31P14063 131 aaPredicted RBP1.29□□□□□ -2.2
CFT1YDR301W MST28P39552 234 aa1.29□□□□□ -2.2
CFT1YDR301W YIA6P40556 373 aa1.29□□□□□ -2.2
CFT1YDR301W MRPL49P40858 161 aaPredicted RBP1.29□□□□□ -2.2
CFT1YDR301W VMA21P41806 77 aa1.29□□□□□ -2.2
CFT1YDR301W VPS71Q03433 280 aa1.29□□□□□ -2.2
CFT1YDR301W RAV2Q03956 351 aa1.29□□□□□ -2.2
CFT1YDR301W YOR105WQ08504 108 aa1.29□□□□□ -2.2
CFT1YDR301W DCN1Q12395 269 aa1.29□□□□□ -2.2
CFT1YDR301W ARO2P28777 376 aaKnown RBP1.28□□□□□ -2.2
CFT1YDR301W MGR2Q02889 113 aa1.28□□□□□ -2.2
CFT1YDR301W IRC23Q08416 157 aa1.28□□□□□ -2.2
CFT1YDR301W RPL2AP0CX45 254 aaKnown RBP1.28□□□□□ -2.2
CFT1YDR301W RPL2BP0CX46 254 aaKnown RBP1.28□□□□□ -2.2
CFT1YDR301W RPL18AP0CX49 186 aaKnown RBP1.28□□□□□ -2.2
CFT1YDR301W RPL18BP0CX50 186 aaKnown RBP1.28□□□□□ -2.2
CFT1YDR301W MRP49P32388 137 aa1.28□□□□□ -2.2
CFT1YDR301W TOA2P32774 122 aa1.28□□□□□ -2.2
CFT1YDR301W PAU7P39545 55 aa1.28□□□□□ -2.2
CFT1YDR301W PRE5P40302 234 aaKnown RBP1.28□□□□□ -2.2
CFT1YDR301W MIC26P50087 233 aa1.28□□□□□ -2.2
CFT1YDR301W GPI19Q04082 140 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms