RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W ERV14P53173 138 aa4.46□□□□□ -1.7
VMS1YDR049W YDR274CP87283 123 aa4.46□□□□□ -1.7
VMS1YDR049W ATP20Q12233 115 aa4.46□□□□□ -1.7
VMS1YDR049W UTP10P42945 1769 aaKnown RBP4.46□□□□□ -1.7
VMS1YDR049W EMP24P32803 203 aaKnown RBP4.45□□□□□ -1.7
VMS1YDR049W ARC15P40518 154 aaRIP-Chip data4.45□□□□□ -1.7not detected
VMS1YDR049W MRPS8Q03799 155 aa4.45□□□□□ -1.7
VMS1YDR049W FKS3Q04952 1785 aa4.45□□□□□ -1.7
VMS1YDR049W GPI18P38211 433 aa4.45□□□□□ -1.7
VMS1YDR049W ASP1P38986 381 aaPredicted RBP4.45□□□□□ -1.7
VMS1YDR049W YAL064WP39711 94 aa4.45□□□□□ -1.7
VMS1YDR049W YNR064CP53750 290 aa4.45□□□□□ -1.7
VMS1YDR049W MDH2P22133 377 aa4.44□□□□□ -1.7
VMS1YDR049W UMP1P38293 148 aa4.44□□□□□ -1.7
VMS1YDR049W DSK2P48510 373 aa4.44□□□□□ -1.7
VMS1YDR049W RSM10Q03201 203 aa4.44□□□□□ -1.7
VMS1YDR049W YDR029WQ12111 104 aa4.44□□□□□ -1.7
VMS1YDR049W DFM1Q12743 341 aaKnown RBP4.44□□□□□ -1.7
VMS1YDR049W YGL010WP25338 174 aa4.43□□□□□ -1.7
VMS1YDR049W RNQ1P25367 405 aa4.43□□□□□ -1.7
VMS1YDR049W SDH3P33421 198 aa4.43□□□□□ -1.7
VMS1YDR049W ECM19Q06011 112 aa4.43□□□□□ -1.7
VMS1YDR049W FIT3Q08907 204 aa4.43□□□□□ -1.7
VMS1YDR049W FEX1Q08913 375 aa4.43□□□□□ -1.7
VMS1YDR049W FEX2Q08991 375 aa4.43□□□□□ -1.7
VMS1YDR049W HMRA1P0CY11 126 aa4.43□□□□□ -1.7
VMS1YDR049W YIL054WP40524 105 aa4.43□□□□□ -1.7
VMS1YDR049W TIR3P40552 269 aa4.43□□□□□ -1.7
VMS1YDR049W YRF1-3P0CX14 1859 aa4.42□□□□□ -1.7
VMS1YDR049W YRF1-7P0CX15 1859 aa4.42□□□□□ -1.7
VMS1YDR049W YRF1-6P53819 1859 aa4.42□□□□□ -1.7
VMS1YDR049W YET1P35723 206 aa4.42□□□□□ -1.7
VMS1YDR049W MPC1P53157 130 aaKnown RBP4.42□□□□□ -1.7
VMS1YDR049W YPL067CQ02754 198 aa4.42□□□□□ -1.7
VMS1YDR049W YML122CQ03207 126 aa4.42□□□□□ -1.7
VMS1YDR049W GPI11Q06636 219 aa4.42□□□□□ -1.7
VMS1YDR049W CSI2Q08054 341 aa4.42□□□□□ -1.7
VMS1YDR049W KSH1Q8TGJ3 72 aa4.42□□□□□ -1.7
VMS1YDR049W FMT1P32785 401 aa4.41□□□□□ -1.7
VMS1YDR049W CTR2P38865 189 aa4.41□□□□□ -1.7
VMS1YDR049W HPA3P39979 161 aa4.41□□□□□ -1.7
VMS1YDR049W HAL1Q01766 294 aa4.41□□□□□ -1.7
VMS1YDR049W LIP1Q03579 150 aa4.41□□□□□ -1.7
VMS1YDR049W YOL029CQ08187 201 aa4.41□□□□□ -1.7
VMS1YDR049W POR1P04840 283 aaKnown RBP4.41□□□□□ -1.7
VMS1YDR049W YFR035CP43608 114 aa4.41□□□□□ -1.7
VMS1YDR049W SHH3Q04487 196 aa4.41□□□□□ -1.7
VMS1YDR049W RRT1P38192 103 aa4.4□□□□□ -1.71
VMS1YDR049W YHL042WP38729 150 aa4.4□□□□□ -1.71
VMS1YDR049W YEL073CP39974 107 aa4.4□□□□□ -1.71
VMS1YDR049W SPO73P40031 143 aa4.4□□□□□ -1.71
VMS1YDR049W FLX1P40464 311 aa4.4□□□□□ -1.71
VMS1YDR049W SCS22Q6Q595 175 aa4.4□□□□□ -1.71
VMS1YDR049W FAS2P19097 1887 aaKnown RBP4.4□□□□□ -1.71
VMS1YDR049W RPB9P27999 122 aa4.39□□□□□ -1.71
VMS1YDR049W YHR125WP38831 101 aa4.39□□□□□ -1.71
VMS1YDR049W SCW4P53334 386 aaKnown RBP4.39□□□□□ -1.71
VMS1YDR049W COX5BP00425 151 aa4.39□□□□□ -1.71
VMS1YDR049W UBC4P15731 148 aa4.39□□□□□ -1.71
VMS1YDR049W ERG25P53045 309 aa4.39□□□□□ -1.71
VMS1YDR049W YMR082CQ04276 118 aa4.39□□□□□ -1.71
VMS1YDR049W YLR281CQ05863 155 aa4.39□□□□□ -1.71
VMS1YDR049W IRC25Q07951 179 aa4.39□□□□□ -1.71
VMS1YDR049W SNF11P38956 169 aa4.38□□□□□ -1.71
VMS1YDR049W SUN4P53616 420 aa4.38□□□□□ -1.71
VMS1YDR049W YMR295CQ03559 197 aa4.38□□□□□ -1.71
VMS1YDR049W RIM9Q04734 239 aa4.38□□□□□ -1.71
VMS1YDR049W YOL162WP0CF19 215 aa4.37□□□□□ -1.71
VMS1YDR049W MAK31P23059 88 aa4.37□□□□□ -1.71
VMS1YDR049W TVP23P38962 199 aa4.37□□□□□ -1.71
VMS1YDR049W TDA2P40045 126 aa4.37□□□□□ -1.71
VMS1YDR049W PIN3Q06449 215 aa4.37□□□□□ -1.71
VMS1YDR049W RAF1Q06891 181 aa4.37□□□□□ -1.71
VMS1YDR049W SRL1Q08673 210 aa4.37□□□□□ -1.71
VMS1YDR049W YKL044WP36092 106 aa4.37□□□□□ -1.71
VMS1YDR049W MRPL11P36521 249 aaPredicted RBP4.37□□□□□ -1.71
VMS1YDR049W PTH1P38876 190 aaKnown RBP4.37□□□□□ -1.71
VMS1YDR049W IGD1P43598 195 aa4.37□□□□□ -1.71
VMS1YDR049W KNH1P50112 268 aa4.37□□□□□ -1.71
VMS1YDR049W CAX4P53223 239 aa4.37□□□□□ -1.71
VMS1YDR049W YOR385WQ08909 290 aa4.37□□□□□ -1.71
VMS1YDR049W ECM12O13529 151 aa4.36□□□□□ -1.71
VMS1YDR049W ECO1P43605 281 aa4.36□□□□□ -1.71
VMS1YDR049W MPC3P53311 146 aa4.36□□□□□ -1.71
VMS1YDR049W SEN15Q04675 128 aa4.36□□□□□ -1.71
VMS1YDR049W YER078W-AQ3E7A2 54 aa4.36□□□□□ -1.71
VMS1YDR049W COA6Q3E846 104 aa4.36□□□□□ -1.71
VMS1YDR049W YLR365WQ7LIF2 110 aa4.36□□□□□ -1.71
VMS1YDR049W MIC10Q96VH5 97 aa4.36□□□□□ -1.71
VMS1YDR049W YNL217WP40152 326 aa4.35□□□□□ -1.71
VMS1YDR049W MSL1P40567 111 aaPredicted RBP4.35□□□□□ -1.71
VMS1YDR049W PIR5P46999 287 aa4.35□□□□□ -1.71
VMS1YDR049W THG1P53215 237 aaKnown RBP4.35□□□□□ -1.71
VMS1YDR049W HRT1Q08273 121 aa4.35□□□□□ -1.71
VMS1YDR049W YCL021W-AQ96VH3 125 aa4.35□□□□□ -1.71
VMS1YDR049W SMX2P40204 77 aaKnown RBP4.35□□□□□ -1.71
VMS1YDR049W YOR381W-AQ3E804 55 aa4.35□□□□□ -1.71
VMS1YDR049W YAL067W-AQ8TGK6 75 aa4.35□□□□□ -1.71
VMS1YDR049W PHO88P38264 188 aaPredicted RBP4.34□□□□□ -1.71
VMS1YDR049W MIG3P39943 394 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms