RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W RIB4P50861 169 aaPredicted RBP1.15□□□□□ -2.22
TRM3YDL112W BER1Q06688 274 aaKnown RBP1.15□□□□□ -2.22
TRM3YDL112W RPS25AQ3E792 108 aaPredicted RBP1.15□□□□□ -2.22
TRM3YDL112W TFB5Q3E7C1 72 aaPredicted RBP1.15□□□□□ -2.22
TRM3YDL112W AHT1P29589 182 aa1.15□□□□□ -2.23
TRM3YDL112W RNP1P32385 249 aa1.15□□□□□ -2.23
TRM3YDL112W MRP49P32388 137 aa1.15□□□□□ -2.23
TRM3YDL112W ASP1P38986 381 aaPredicted RBP1.15□□□□□ -2.23
TRM3YDL112W FIT2Q08906 153 aa1.15□□□□□ -2.23
TRM3YDL112W TIR2P33890 251 aa1.15□□□□□ -2.23
TRM3YDL112W MRPS17Q03246 237 aaPredicted RBP1.15□□□□□ -2.23
TRM3YDL112W RDI1Q12434 202 aa1.15□□□□□ -2.23
TRM3YDL112W HSP12P22943 109 aaKnown RBP1.14□□□□□ -2.23
TRM3YDL112W TIP1P27654 210 aaPredicted RBP1.14□□□□□ -2.23
TRM3YDL112W HMX1P32339 317 aa1.14□□□□□ -2.23
TRM3YDL112W YBR292CP38357 123 aa1.14□□□□□ -2.23
TRM3YDL112W YHR173CP38864 112 aa1.14□□□□□ -2.23
TRM3YDL112W HIT1P46973 164 aa1.14□□□□□ -2.23
TRM3YDL112W PNC1P53184 216 aaKnown RBP1.14□□□□□ -2.23
TRM3YDL112W UPS3Q04006 179 aa1.14□□□□□ -2.23
TRM3YDL112W ERV2Q12284 196 aa1.14□□□□□ -2.23
TRM3YDL112W RNA15P25299 296 aaPredicted RBP1.14□□□□□ -2.23
TRM3YDL112W YCR007CP25354 239 aa1.14□□□□□ -2.23
TRM3YDL112W SNU13P39990 126 aaKnown RBP1.14□□□□□ -2.23
TRM3YDL112W HAC1P41546 238 aa1.14□□□□□ -2.23
TRM3YDL112W SMD3P43321 101 aaKnown RBP1.14□□□□□ -2.23
TRM3YDL112W MOG1P47123 218 aa1.14□□□□□ -2.23
TRM3YDL112W TIR1P10863 254 aa1.14□□□□□ -2.23
TRM3YDL112W RPB3P16370 318 aaKnown RBP1.14□□□□□ -2.23
TRM3YDL112W YCR001WP25347 104 aa1.14□□□□□ -2.23
TRM3YDL112W ERG28P40030 148 aa1.14□□□□□ -2.23
TRM3YDL112W EMC5P40540 141 aa1.14□□□□□ -2.23
TRM3YDL112W YKE4P40544 346 aa1.14□□□□□ -2.23
TRM3YDL112W ODC1Q03028 310 aa1.14□□□□□ -2.23
TRM3YDL112W HHF1P02309 103 aaKnown RBP1.13□□□□□ -2.23
TRM3YDL112W ANB1P19211 157 aa1.13□□□□□ -2.23
TRM3YDL112W RPS0AP32905 252 aaKnown RBP1.13□□□□□ -2.23
TRM3YDL112W LSM2P38203 95 aaKnown RBP1.13□□□□□ -2.23
TRM3YDL112W SPC25P40014 221 aa1.13□□□□□ -2.23
TRM3YDL112W RRT13P40042 185 aa1.13□□□□□ -2.23
TRM3YDL112W AIM34Q03673 198 aa1.13□□□□□ -2.23
TRM3YDL112W LCL2Q08045 131 aa1.13□□□□□ -2.23
TRM3YDL112W YJL028WP47062 111 aa1.13□□□□□ -2.23
TRM3YDL112W YNR066CP53752 436 aa1.13□□□□□ -2.23
TRM3YDL112W ATP19P81451 68 aa1.13□□□□□ -2.23
TRM3YDL112W ATC1Q04005 294 aa1.13□□□□□ -2.23
TRM3YDL112W AVO2Q04749 426 aa1.13□□□□□ -2.23
TRM3YDL112W UBC5P15732 148 aa1.13□□□□□ -2.23
TRM3YDL112W CYB5P40312 120 aa1.13□□□□□ -2.23
TRM3YDL112W SDO1Q07953 250 aaKnown RBP1.13□□□□□ -2.23
TRM3YDL112W YBR200W-AQ3E755 54 aa1.13□□□□□ -2.23
TRM3YDL112W YMR122W-AQ3E842 84 aa1.13□□□□□ -2.23
TRM3YDL112W YCR023CP25351 611 aa1.13□□□□□ -2.23
TRM3YDL112W SRP21P32342 167 aa1.13□□□□□ -2.23
TRM3YDL112W MRPL28P36527 147 aa1.13□□□□□ -2.23
TRM3YDL112W SHG1P38337 142 aa1.13□□□□□ -2.23
TRM3YDL112W OXA1P39952 402 aa1.13□□□□□ -2.23
TRM3YDL112W YDR115WQ04598 105 aa1.13□□□□□ -2.23
TRM3YDL112W YLR194CQ05777 254 aa1.13□□□□□ -2.23
TRM3YDL112W YMR316C-AI2HB70 103 aa1.12□□□□□ -2.23
TRM3YDL112W RPS22AP0C0W1 130 aaKnown RBP1.12□□□□□ -2.23
TRM3YDL112W DER1P38307 211 aa1.12□□□□□ -2.23
TRM3YDL112W KEG1P43614 200 aa1.12□□□□□ -2.23
TRM3YDL112W YGR017WP53210 297 aa1.12□□□□□ -2.23
TRM3YDL112W YGR025WP53216 100 aa1.12□□□□□ -2.23
TRM3YDL112W YCL001W-AP87012 153 aa1.12□□□□□ -2.23
TRM3YDL112W MHR1Q06630 226 aa1.12□□□□□ -2.23
TRM3YDL112W YLR146W-AQ2V2P1 62 aa1.12□□□□□ -2.23
TRM3YDL112W COX14P39103 70 aa1.12□□□□□ -2.23
TRM3YDL112W YFR057WP43625 151 aa1.12□□□□□ -2.23
TRM3YDL112W LCL1Q02786 101 aa1.12□□□□□ -2.23
TRM3YDL112W DPP1Q05521 289 aa1.12□□□□□ -2.23
TRM3YDL112W YCR024C-BQ3E7Z8 88 aa1.12□□□□□ -2.23
TRM3YDL112W CKS1P20486 150 aaKnown RBP1.12□□□□□ -2.23
TRM3YDL112W RPL16BP26785 198 aaKnown RBP1.12□□□□□ -2.23
TRM3YDL112W PPQ1P32945 549 aa1.12□□□□□ -2.23
TRM3YDL112W CDC40P40968 455 aaPredicted RBP1.12□□□□□ -2.23
TRM3YDL112W Q0255P03881 472 aa1.11□□□□□ -2.23
TRM3YDL112W YGR026WP53217 278 aa1.11□□□□□ -2.23
TRM3YDL112W TOM7P53507 60 aa1.11□□□□□ -2.23
TRM3YDL112W YMR007WQ03675 126 aa1.11□□□□□ -2.23
TRM3YDL112W YPR195CQ06594 109 aa1.11□□□□□ -2.23
TRM3YDL112W KTI12P34253 313 aaKnown RBP1.11□□□□□ -2.23
TRM3YDL112W TEM1P38987 245 aa1.11□□□□□ -2.23
TRM3YDL112W YNL217WP40152 326 aa1.11□□□□□ -2.23
TRM3YDL112W ANT1Q06497 328 aa1.11□□□□□ -2.23
TRM3YDL112W CTR3Q06686 241 aa1.11□□□□□ -2.23
TRM3YDL112W RRT7Q07829 113 aa1.11□□□□□ -2.23
TRM3YDL112W POF1P25576 258 aa1.11□□□□□ -2.23
TRM3YDL112W MIX23P38162 196 aa1.11□□□□□ -2.23
TRM3YDL112W YAR029WP39549 74 aa1.11□□□□□ -2.23
TRM3YDL112W YJR085CP47131 105 aaKnown RBP1.11□□□□□ -2.23
TRM3YDL112W DAN1P47178 298 aa1.11□□□□□ -2.23
TRM3YDL112W DID2P69771 204 aa1.11□□□□□ -2.23
TRM3YDL112W TIM22Q12328 207 aa1.11□□□□□ -2.23
TRM3YDL112W UBI4P0CG63 381 aaKnown RBP1.11□□□□□ -2.23
TRM3YDL112W SEC59P20048 519 aa1.11□□□□□ -2.23
TRM3YDL112W ACB1P31787 87 aa1.11□□□□□ -2.23
TRM3YDL112W LOC1P43586 204 aaPredicted RBP1.11□□□□□ -2.23
TRM3YDL112W MGA1P53050 456 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms