RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	MFAP3	P55082	362 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	RPL19	P84098	196 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TBRG1	Q3YBR2	411 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KCTD4	Q8WVF5	259 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	LPIN2	Q92539	896 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CCDC51	Q96ER9	411 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MAGED4	Q96JG8	741 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CCDC86	Q9H6F5	360 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CYTH4	Q9UIA0	394 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KCNG1	Q9UIX4	513 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GPC6	Q9Y625	555 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	LIN7A	O14910	233 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	RAD51B	O15315	384 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PPP1R37	O75864	691 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KRT33A	O76009	404 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	FGG	P02679	453 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HOXC9	P31274	260 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ARFIP2	P53365	341 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MAPRE2	Q15555	327 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HEATR6	Q6AI08	1181 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ANKRD13D	Q6ZTN6	518 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PPM1N	Q8N819	430 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PCDH19	Q8TAB3	1148 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MRPL48	Q96GC5	212 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DHRS1	Q96LJ7	313 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CINP	Q9BW66	212 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HMG20A	Q9NP66	347 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DDX18	Q9NVP1	670 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZNF831	Q5JPB2	1677 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	RRN3P2	A6NIE6	340 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CPA3	P15088	417 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ATP6V1B2	P21281	511 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HSPA13	P48723	471 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HSF2	Q03933	536 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DHX34	Q14147	1143 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TTC6	Q86TZ1	520 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CABP7	Q86V35	215 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CHERP	Q8IWX8	916 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SLC7A3	Q8WY07	619 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TOP1MT	Q969P6	601 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	RPRD1A	Q96P16	312 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	EYA3	Q99504	573 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SH3BP4	Q9P0V3	963 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	LOC100506127	A0A0U1RQW1	187 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KCNH1	O95259	989 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PRL	P01236	227 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MARK3	P27448	753 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ALDH3A2	P51648	485 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DRG2	P55039	364 aa	Known RBP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZNF846	Q147U1	533 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZCWPW2	Q504Y3	356 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	C4orf22	Q6V702	233 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	BRINP3	Q76B58	766 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CHID1	Q9BWS9	393 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TSSK1B	Q9BXA7	367 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CYP39A1	Q9NYL5	469 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PADI4	Q9UM07	663 aa		4.24	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SYNGAP1	Q96PV0	1343 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MDFIC2	A0A1B0GVS7	189 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ASB14	A6NK59	587 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TTC34	A8MYJ7	566 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PSMD11	O00231	422 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GADD45B	O75293	160 aa	Predicted RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MED26	O95402	600 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ANXA1	P04083	346 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GTF2H3	Q13889	308 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	EIF4A2	Q14240	407 aa	Known RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	IRAK1BP1	Q5VVH5	260 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	C12orf50	Q8NA57	414 aa	Predicted RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PNKP	Q96T60	521 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TEKT3	Q9BXF9	490 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CAB39L	Q9H9S4	337 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KCNJ14	Q9UNX9	436 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	BAIAP2	Q9UQB8	552 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CEP290	O15078	2479 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GC	P02774	474 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DBI	P07108	87 aa	Known RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GAP43	P17677	238 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MAGEA10	P43363	369 aa	Predicted RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CTCF	P49711	727 aa	Predicted RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZNF827	Q17R98	1081 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ANKRD26P1	Q6NSI1	321 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZNF544	Q6NX49	715 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ARMC6	Q6NXE6	501 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	RHPN2	Q8IUC4	686 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	AKAP12	Q02952	1782 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MAP3K13	O43283	966 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SSX5	O60225	188 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KRT34	O76011	436 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZNF682	O95780	498 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	UMPS	P11172	480 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CASP1	P29466	404 aa		4.23	□□□□□ -1.73

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