RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 TDP1Q9NUW8 608 aa20.9■□□□□ 0.94
R3HDM1-215ENST00000483021 HSPBP1Q9NZL4 362 aa20.9■□□□□ 0.94
R3HDM1-215ENST00000483021 GTF3C4Q9UKN8 822 aa20.9■□□□□ 0.94
R3HDM1-215ENST00000483021 HELZP42694 1942 aaKnown RBP20.9■□□□□ 0.94
R3HDM1-215ENST00000483021 SDHBP21912 280 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 CYP2F1P24903 491 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 CNR2P34972 360 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 GPR15P49685 360 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 ZNF268Q14587 947 aaPredicted RBP20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 SOWAHAQ2M3V2 549 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 FAM26FQ5R3K3 315 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 LMBRD2Q68DH5 695 aaPredicted RBP20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 LAIR1Q6GTX8 287 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 C4orf50Q6ZRC1 276 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 Q6ZS52 159 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 MON1AQ86VX9 555 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 OSTM1Q86WC4 334 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 CBWD2Q8IUF1 395 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 GLIS3Q8NEA6 775 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 USP13Q92995 863 aaPredicted RBP20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 HPDLQ96IR7 371 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 FAM84AQ96KN4 292 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 FAM83CQ9BQN1 747 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 DLL3Q9NYJ7 618 aa20.89■□□□□ 0.93
R3HDM1-215ENST00000483021 PTPRJQ12913 1337 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 SNRPFP62306 86 aaKnown RBP20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 AMPD2Q01433 879 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 LMNB2Q03252 620 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 RUNX3Q13761 415 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 MAPRE1Q15691 268 aaKnown RBP20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 DDR2Q16832 855 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 WDR44Q5JSH3 913 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 SDHAF4Q5VUM1 108 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 TXNDC8Q6A555 127 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 CC2D1AQ6P1N0 951 aaPredicted RBP20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 EPM2AIP1Q7L775 607 aaPredicted RBP20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 OR5B17Q8NGF7 314 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 HPS3Q969F9 1004 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 GKN1Q9NS71 199 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 TFIP11Q9UBB9 837 aaKnown RBP20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 CCL26Q9Y258 94 aa20.88■□□□□ 0.93
R3HDM1-215ENST00000483021 TADA3O75528 432 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 MAGEA11P43364 429 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 SNRNP35Q16560 246 aaKnown RBP20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 SCARA3Q6AZY7 606 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 FAM171BQ6P995 826 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 SHC4Q6S5L8 630 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 LIMS2Q7Z4I7 341 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 LONP2Q86WA8 852 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 FSIP1Q8NA03 581 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 STKLD1Q8NE28 680 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 ZNF507Q8TCN5 953 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 SNX21Q969T3 373 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 CEP295NLQ96MC4 621 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 C7orf25Q9BPX7 421 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 SYT15Q9BQS2 421 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 HPS4Q9NQG7 708 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 CDH9Q9ULB4 789 aa20.87■□□□□ 0.93
R3HDM1-215ENST00000483021 PRR5-ARHGAP8B1AHC4 643 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 K7ESF4 209 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 HOXA6P31267 233 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 HOXD13P35453 343 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 ARHGAP8P85298 464 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 FAM160A1Q05DH4 1040 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 PDGFRLQ15198 375 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 VSTM1Q6UX27 236 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 UNC13DQ70J99 1090 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 HS2ST1Q7LGA3 356 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 SCN4BQ8IWT1 228 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 KBTBD7Q8WVZ9 684 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 EXOC4Q96A65 974 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 EBF3Q9H4W6 596 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 AGPAT3Q9NRZ7 376 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 USP18Q9UMW8 372 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 RALGAPA1Q6GYQ0 2036 aa20.86■□□□□ 0.93
R3HDM1-215ENST00000483021 TRAV19A0A0A6YYK7 116 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 CHURC1-FNTBB4DL54 471 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 CKMP06732 381 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 USP17L7P0C7H9 530 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 WARSP23381 471 aaKnown RBP20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 FNTBP49356 437 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 GRSF1Q12849 480 aaKnown RBP eCLIP20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 MTF1Q14872 753 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 RSPO4Q2I0M5 234 aaPredicted RBP20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 TMEM196Q5HYL7 178 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 PRR23BQ6ZRT6 265 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 TRAPPC11Q7Z392 1133 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 FNBP1Q96RU3 617 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 TRPC7Q9HCX4 862 aa20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 CGNQ9P2M7 1197 aaKnown RBP20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 MAGEC2Q9UBF1 373 aaPredicted RBP20.85■□□□□ 0.93
R3HDM1-215ENST00000483021 SPAG17Q6Q759 2223 aa20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 TRDMT1O14717 391 aaKnown RBP20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 POLR2DO15514 142 aaKnown RBP20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 TGFB1I1O43294 461 aa20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 HCRTO43612 131 aa20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 LRP3O75074 770 aa20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 HSP90AA1P07900 732 aaKnown RBP20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 RETP07949 1114 aa20.84■□□□□ 0.93
R3HDM1-215ENST00000483021 DLATP10515 647 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms