RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 ZNF507Q8TCN5 953 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 NOC3LQ8WTT2 800 aaKnown RBP14.3□□□□□ -0.12
CHEK2-213ENST00000433028 DHX58Q96C10 678 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 FUBP3Q96I24 572 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHEK2-213ENST00000433028 MYRFLQ96LU7 910 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 FAM83CQ9BQN1 747 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 SMG9Q9H0W8 520 aaKnown RBP14.3□□□□□ -0.12
CHEK2-213ENST00000433028 KIF9Q9HAQ2 790 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 KIAA1586Q9HCI6 787 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 RBM12Q9NTZ6 932 aaKnown RBP14.3□□□□□ -0.12
CHEK2-213ENST00000433028 TDP1Q9NUW8 608 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 HSPBP1Q9NZL4 362 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 GTF3C4Q9UKN8 822 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 MYO16Q9Y6X6 1858 aa14.3□□□□□ -0.12
CHEK2-213ENST00000433028 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
CHEK2-213ENST00000433028 TNNC2P02585 160 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 ASIC1P78348 528 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 SATB1Q01826 763 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 MYO1EQ12965 1108 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 DDR2Q16832 855 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 FAM26FQ5R3K3 315 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 LMBRD2Q68DH5 695 aaPredicted RBP14.29□□□□□ -0.12
CHEK2-213ENST00000433028 FAM171BQ6P995 826 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 MON1AQ86VX9 555 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 WDR49Q8IV35 697 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 SYNPOQ8N3V7 929 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 MAB21L3Q8N8X9 362 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 TTC8Q8TAM2 541 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 MRPS31Q92665 395 aaKnown RBP14.29□□□□□ -0.12
CHEK2-213ENST00000433028 USP13Q92995 863 aaPredicted RBP14.29□□□□□ -0.12
CHEK2-213ENST00000433028 SECISBP2LQ93073 1101 aaKnown RBP14.29□□□□□ -0.12
CHEK2-213ENST00000433028 HPDLQ96IR7 371 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 MAGEF1Q9HAY2 307 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 GKN1Q9NS71 199 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 UXTQ9UBK9 157 aaPredicted RBP14.29□□□□□ -0.12
CHEK2-213ENST00000433028 CCL26Q9Y258 94 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
CHEK2-213ENST00000433028 UBE4BO95155 1302 aa14.29□□□□□ -0.12
CHEK2-213ENST00000433028 EML5Q05BV3 1969 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 K7ESF4 209 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 TGFB1I1O43294 461 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 HCRTO43612 131 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 TADA3O75528 432 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 MAGEA11P43364 429 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 SNRPFP62306 86 aaKnown RBP14.28□□□□□ -0.12
CHEK2-213ENST00000433028 ZNF268Q14587 947 aaPredicted RBP14.28□□□□□ -0.12
CHEK2-213ENST00000433028 PUM1Q14671 1186 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHEK2-213ENST00000433028 PON2Q15165 354 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 CCDC142Q17RM4 750 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 SDHAF4Q5VUM1 108 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 TXNDC8Q6A555 127 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 Q6ZS52 159 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 UNC13DQ70J99 1090 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 STKLD1Q8NE28 680 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 KBTBD7Q8WVZ9 684 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 HPS4Q9NQG7 708 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 AGPAT3Q9NRZ7 376 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 DLL3Q9NYJ7 618 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
CHEK2-213ENST00000433028 KIAA1549LQ6ZVL6 1849 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 SDK1Q7Z5N4 2213 aa14.28□□□□□ -0.12
CHEK2-213ENST00000433028 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.12
CHEK2-213ENST00000433028 HOXA6P31267 233 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 RUNX3Q13761 415 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 MAPRE1Q15691 268 aaKnown RBP14.27□□□□□ -0.12
CHEK2-213ENST00000433028 SNRNP35Q16560 246 aaKnown RBP14.27□□□□□ -0.12
CHEK2-213ENST00000433028 VSTM1Q6UX27 236 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 C4orf50Q6ZRC1 276 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 SPATA2LQ8IUW3 424 aaPredicted RBP14.27□□□□□ -0.12
CHEK2-213ENST00000433028 RIN3Q8TB24 985 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 SCFD1Q8WVM8 642 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 CHFRQ96EP1 664 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 CEP295NLQ96MC4 621 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 SYT15Q9BQS2 421 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 CDH9Q9ULB4 789 aa14.27□□□□□ -0.12
CHEK2-213ENST00000433028 SPTBN2O15020 2390 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 OTOL1A6NHN0 477 aaPredicted RBP14.26□□□□□ -0.13
CHEK2-213ENST00000433028 POLR2DO15514 142 aaKnown RBP14.26□□□□□ -0.13
CHEK2-213ENST00000433028 ATP2C2O75185 946 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 F13A1P00488 732 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 TGM1P22735 817 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
CHEK2-213ENST00000433028 LMO2P25791 158 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 CNR2P34972 360 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 FAM160A1Q05DH4 1040 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 PSMD6Q15008 389 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 BMT2Q1RMZ1 405 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 TMEM196Q5HYL7 178 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 ATL3Q6DD88 541 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 LAIR1Q6GTX8 287 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 TRAPPC11Q7Z392 1133 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 C12orf56Q8IXR9 622 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 SPATA17Q96L03 361 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 EBF3Q9H4W6 596 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 CRTAC1Q9NQ79 661 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 CGNQ9P2M7 1197 aaKnown RBP14.26□□□□□ -0.13
CHEK2-213ENST00000433028 GMEB2Q9UKD1 530 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 RAB23Q9ULC3 237 aa14.26□□□□□ -0.13
CHEK2-213ENST00000433028 MYH10P35580 1976 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms