RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 ANK1P16157 1881 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 HMGA1P17096 107 aaKnown RBP16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 PDCP20941 246 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 ACAT1P24752 427 aaKnown RBP16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 PCSK1P29120 753 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 MPLP40238 635 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 GALK1P51570 392 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 LIMK1P53667 647 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 FAM160A1Q05DH4 1040 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 ZNF268Q14587 947 aaPredicted RBP16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 INTS6LQ5JSJ4 861 aaKnown RBP16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 PDCL2Q8N4E4 241 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 LRRC15Q8TF66 581 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 LEO1Q8WVC0 666 aaPredicted RBP16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 FIZ1Q96SL8 496 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 TMEM206Q9H813 350 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 ABCB6Q9NP58 842 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 VPS45Q9NRW7 570 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 TBC1D7Q9P0N9 293 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 GTF3C4Q9UKN8 822 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 ITGA11Q9UKX5 1188 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 SNX9Q9Y5X1 595 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 GPR179Q6PRD1 2367 aa16.72■□□□□ 0.27
SBDSP1-201ENST00000415772 RALGAPA1Q6GYQ0 2036 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 APBB3O95704 486 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 CYP2F1P24903 491 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 HOXC13P31276 330 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 GJA4P35212 333 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 LHX1P48742 406 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 PDE6CP51160 858 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 DGKEP52429 567 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 RBP5P82980 135 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 GRIN1Q05586 938 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 MYO1EQ12965 1108 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 STPG1Q5TH74 334 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 RNF43Q68DV7 783 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 CRELD2Q6UXH1 353 aaPredicted RBP16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 C4orf50Q6ZRC1 276 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 BRSK2Q8IWQ3 736 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 ADGRF2Q8IZF7 708 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 CHFRQ96EP1 664 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 ANKRD36BP1Q96IX9 119 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 TMLHEQ9NVH6 421 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 L1RE1Q9UN81 338 aa16.71■□□□□ 0.27
SBDSP1-201ENST00000415772 ANXA13P27216 316 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 RAP1GAPP47736 663 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 CREB5Q02930 508 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 ALCAMQ13740 583 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 DMC1Q14565 340 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 OSCP1Q8WVF1 389 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 TRMT2BQ96GJ1 504 aaKnown RBP16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 EPSTI1Q96J88 318 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 WNT6Q9Y6F9 365 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 F5P12259 2224 aa16.7■□□□□ 0.26
SBDSP1-201ENST00000415772 GOLGA8IPA6NC78 632 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 OTOL1A6NHN0 477 aaPredicted RBP16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 GOLGA8JA6NMD2 632 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 NOL4O94818 638 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 NFATC1O95644 943 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 TNNC2P02585 160 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 GARTP22102 1010 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 SYT13Q7L8C5 426 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 C11orf74Q86VG3 221 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 TTC30AQ86WT1 665 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 C1orf127Q8N9H9 656 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 TSTD1Q8NFU3 115 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 SPATA18Q8TC71 538 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 SNX21Q969T3 373 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 FUBP3Q96I24 572 aaKnown RBP eCLIP16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 ZC3H10Q96K80 434 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 CYP2S1Q96SQ9 504 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 SMOC1Q9H4F8 434 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 PCIF1Q9H4Z3 704 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 EHD2Q9NZN4 543 aa16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
SBDSP1-201ENST00000415772 NCOR2Q9Y618 2525 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 ZNF638Q14966 1978 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 CLSTN1O94985 981 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 HDCP19113 662 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 ADSSP30520 456 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 GRIK1P39086 918 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 STAT6P42226 847 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 MAPRE1Q15691 268 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 PLK5Q496M5 336 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 CFAP221Q4G0U5 840 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 USP39Q53GS9 565 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 N4BP2L1Q5TBK1 243 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 CCDC73Q6ZRK6 1079 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 TOP6BLQ8N6T0 577 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 ARL14EPQ8N8R7 260 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
SBDSP1-201ENST00000415772 EDEM2Q9BV94 578 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms