RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 RNF19AQ9NV58 838 aa15.04■□□□□ -0
GABPA-202ENST00000400075 PYCARDQ9ULZ3 195 aa15.04■□□□□ -0
GABPA-202ENST00000400075 SIGLEC1Q9BZZ2 1709 aa15.04■□□□□ -0
GABPA-202ENST00000400075 RASGRF2O14827 1237 aa15.03■□□□□ -0
GABPA-202ENST00000400075 PSMD10O75832 226 aa15.03■□□□□ -0
GABPA-202ENST00000400075 GEMIN4P57678 1058 aaKnown RBP15.03■□□□□ -0
GABPA-202ENST00000400075 RHOAP61586 193 aa15.03■□□□□ -0
GABPA-202ENST00000400075 B4GALNT4Q76KP1 1039 aa15.03■□□□□ -0
GABPA-202ENST00000400075 DSG4Q86SJ6 1040 aa15.03■□□□□ -0
GABPA-202ENST00000400075 IPMKQ8NFU5 416 aa15.03■□□□□ -0
GABPA-202ENST00000400075 C1orf54Q8WWF1 131 aa15.03■□□□□ -0
GABPA-202ENST00000400075 KRT35Q92764 455 aa15.03■□□□□ -0
GABPA-202ENST00000400075 RABEP2Q9H5N1 569 aa15.03■□□□□ -0
GABPA-202ENST00000400075 RBPJLQ9UBG7 517 aa15.03■□□□□ -0
GABPA-202ENST00000400075 TNFSF13BQ9Y275 285 aa15.03■□□□□ -0
GABPA-202ENST00000400075 GIT1Q9Y2X7 761 aa15.03■□□□□ -0
GABPA-202ENST00000400075 FRMPD4Q14CM0 1322 aa15.03■□□□□ -0
GABPA-202ENST00000400075 ZBTB39O15060 712 aa15.03■□□□□ -0
GABPA-202ENST00000400075 SH3BP5LQ7L8J4 393 aa15.03■□□□□ -0
GABPA-202ENST00000400075 CRLS1Q9UJA2 301 aa15.03■□□□□ -0
GABPA-202ENST00000400075 SYF2O95926 243 aaKnown RBP15.03■□□□□ -0
GABPA-202ENST00000400075 PAX3P23760 479 aa15.03■□□□□ -0
GABPA-202ENST00000400075 CCR1P32246 355 aa15.03■□□□□ -0
GABPA-202ENST00000400075 TRIM65Q6PJ69 517 aa15.03■□□□□ -0
GABPA-202ENST00000400075 ANGPTL8Q6UXH0 198 aa15.03■□□□□ -0
GABPA-202ENST00000400075 FBXL16Q8N461 479 aa15.03■□□□□ -0
GABPA-202ENST00000400075 ZNF557Q8N988 423 aaPredicted RBP15.03■□□□□ -0
GABPA-202ENST00000400075 C12orf42Q96LP6 360 aa15.03■□□□□ -0
GABPA-202ENST00000400075 ZNF212Q9UDV6 495 aa15.03■□□□□ -0
GABPA-202ENST00000400075 CBX4O00257 560 aa15.03■□□□□ -0
GABPA-202ENST00000400075 GLRA2P23416 452 aa15.03■□□□□ -0
GABPA-202ENST00000400075 BDNFP23560 247 aa15.03■□□□□ -0
GABPA-202ENST00000400075 TBX4P57082 545 aa15.03■□□□□ -0
GABPA-202ENST00000400075 SMAD1Q15797 465 aaKnown RBP15.03■□□□□ -0
GABPA-202ENST00000400075 PTRHD1Q6GMV3 140 aaKnown RBP15.03■□□□□ -0
GABPA-202ENST00000400075 SLC25A41Q8N5S1 370 aa15.03■□□□□ -0
GABPA-202ENST00000400075 SUSD6Q92537 303 aa15.03■□□□□ -0
GABPA-202ENST00000400075 ZFATQ9P243 1243 aa15.03■□□□□ -0
GABPA-202ENST00000400075 ANO9A1A5B4 782 aa15.02■□□□□ -0
GABPA-202ENST00000400075 KLRG2A4D1S0 409 aaPredicted RBP15.02■□□□□ -0
GABPA-202ENST00000400075 SERPIND1P05546 499 aa15.02■□□□□ -0
GABPA-202ENST00000400075 ATP5BP06576 529 aaKnown RBP15.02■□□□□ -0
GABPA-202ENST00000400075 CSH1P0DML2 217 aa15.02■□□□□ -0
GABPA-202ENST00000400075 CSH2P0DML3 217 aa15.02■□□□□ -0
GABPA-202ENST00000400075 SYN1P17600 705 aa15.02■□□□□ -0
GABPA-202ENST00000400075 HDCP19113 662 aa15.02■□□□□ -0
GABPA-202ENST00000400075 ACLYP53396 1101 aa15.02■□□□□ -0
GABPA-202ENST00000400075 OCRLQ01968 901 aa15.02■□□□□ -0
GABPA-202ENST00000400075 FPGSQ05932 587 aa15.02■□□□□ -0
GABPA-202ENST00000400075 MTA1Q13330 715 aa15.02■□□□□ -0
GABPA-202ENST00000400075 AMIGO3Q86WK7 504 aa15.02■□□□□ -0
GABPA-202ENST00000400075 GPATCH11Q8N954 259 aa15.02■□□□□ -0
GABPA-202ENST00000400075 ZBTB18Q99592 522 aa15.02■□□□□ -0
GABPA-202ENST00000400075 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
GABPA-202ENST00000400075 INTS9Q9NV88 658 aaKnown RBP15.02■□□□□ -0
GABPA-202ENST00000400075 SMTNL2Q2TAL5 461 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 SPATA24Q86W54 205 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 FAM131BQ86XD5 332 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 RNF135Q8IUD6 432 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 SLC35G2Q8TBE7 412 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 EDEM1Q92611 657 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 ZNF518BQ9C0D4 1074 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 FOXN3O00409 490 aaPredicted RBP15.02□□□□□ -0.01
GABPA-202ENST00000400075 RASSF2P50749 326 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 ARSEP51690 589 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 ZNF284Q2VY69 593 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 ATP11CQ8NB49 1132 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 SRPK1Q96SB4 655 aaKnown RBP15.02□□□□□ -0.01
GABPA-202ENST00000400075 NUF2Q9BZD4 464 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 PADI3Q9ULW8 664 aa15.02□□□□□ -0.01
GABPA-202ENST00000400075 TRIM66O15016 1216 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 RBP3P10745 1247 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 PTENP60484 403 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 GRIK3Q13003 919 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 DENND5BQ6ZUT9 1274 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 SPATA18Q8TC71 538 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 PAWRQ96IZ0 340 aaKnown RBP15.01□□□□□ -0.01
GABPA-202ENST00000400075 CCDC78A2IDD5 438 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 TREHO43280 583 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 CST8O60676 142 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 SGCGQ13326 291 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 PPP2R2DQ66LE6 453 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 GJB7Q6PEY0 223 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 GPR20Q99678 358 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 MAF1Q9H063 256 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.01□□□□□ -0.01
GABPA-202ENST00000400075 SUN2Q9UH99 717 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 TRAV19A0A0A6YYK7 116 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 RRP9O43818 475 aaKnown RBP15.01□□□□□ -0.01
GABPA-202ENST00000400075 RPL9P32969 192 aaKnown RBP15.01□□□□□ -0.01
GABPA-202ENST00000400075 SLFN11Q7Z7L1 901 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 TBC1D1Q86TI0 1168 aaPredicted RBP15.01□□□□□ -0.01
GABPA-202ENST00000400075 MAP4K3Q8IVH8 894 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 RRN3Q9NYV6 651 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 CCDC151A5D8V7 595 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 COPEO14579 308 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 CUL1Q13616 776 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 CCDC137Q6PK04 289 aaKnown RBP15.01□□□□□ -0.01
GABPA-202ENST00000400075 RASAL3Q86YV0 1011 aa15.01□□□□□ -0.01
GABPA-202ENST00000400075 GTF3C4Q9UKN8 822 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms