RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 ADRA1DP25100 572 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 PAPOLAP51003 745 aaKnown RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 PPP3CAQ08209 521 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 SURF1Q15526 300 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 C15orf52Q6ZUT6 534 aaKnown RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 ACTL9Q8TC94 416 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 RIT2Q99578 217 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 PDCD2LQ9BRP1 358 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 CPA4Q9UI42 421 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 GCLCP48506 637 aaPredicted RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 ARPP19P56211 112 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 ACTR2P61160 394 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 OTUD4Q01804 1114 aaKnown RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 FASTKD5Q7L8L6 764 aaKnown RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 PID1Q7Z2X4 250 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 PPIL6Q8IXY8 311 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 TCP10LQ8TDR4 215 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 HES6Q96HZ4 224 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 FAM84AQ96KN4 292 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 CCDC138Q96M89 665 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 SNX25Q9H3E2 840 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 RNF19AQ9NV58 838 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 GGA2Q9UJY4 613 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 SEC24DO94855 1032 aaPredicted RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 GH1P01241 217 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 RFC5P40937 340 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 PIGHQ14442 188 aaPredicted RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 ACAD11Q709F0 780 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 MYLK4Q86YV6 388 aaPredicted RBP17.14■□□□□ 0.33
SFXN1-201ENST00000321442 PCDHA3Q9Y5H8 950 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 MEIS2O14770 477 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 ACADSP16219 412 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 CALB2P22676 271 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 FECHP22830 423 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 VGLL4Q14135 290 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 PRPSAP1Q14558 356 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 CCNG2Q16589 344 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 ZSWIM2Q8NEG5 633 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 SUPT3HO75486 399 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 CHKAP35790 457 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 HABP4Q5JVS0 413 aaKnown RBP17.13■□□□□ 0.33
SFXN1-201ENST00000321442 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
SFXN1-201ENST00000321442 TWF2Q6IBS0 349 aaKnown RBP17.13■□□□□ 0.33
SFXN1-201ENST00000321442 TRIM67Q6ZTA4 783 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 EMC1Q8N766 993 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 CKAP2Q8WWK9 683 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 VWA5AO00534 786 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 NKRFO15226 690 aaKnown RBP eCLIP17.13■□□□□ 0.33
SFXN1-201ENST00000321442 PROSCO94903 275 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 BMPR2Q13873 1038 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 RASA2Q15283 850 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 LY6KQ17RY6 165 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 ZCWPW2Q504Y3 356 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
SFXN1-201ENST00000321442 IZUMO2Q6UXV1 221 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 STK32AQ8WU08 396 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 TRAPPC12Q8WVT3 735 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 TMA16Q96EY4 203 aaKnown RBP17.13■□□□□ 0.33
SFXN1-201ENST00000321442 TMEM120AQ9BXJ8 343 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 PYGBP11216 843 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 PTPRAP18433 802 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 SOX11P35716 441 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 NPTX2P47972 431 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 CACNA2D1P54289 1103 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 THEMIS2Q5TEJ8 643 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 TBC1D10AQ9BXI6 508 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 KIAA1683Q9H0B3 1180 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 KCTD10Q9H3F6 313 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 DNPEPQ9ULA0 475 aa17.13■□□□□ 0.33
SFXN1-201ENST00000321442 MAGEA13PA6NCF6 341 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 ABCD1P33897 745 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 CENPTQ96BT3 561 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 CCDC68Q9H2F9 335 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 BFARQ9NZS9 450 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
SFXN1-201ENST00000321442 CLCN3P51790 818 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 AQP5P55064 265 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 PGBD4Q96DM1 585 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 RNPEPL1Q9HAU8 725 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
SFXN1-201ENST00000321442 TCF7P36402 384 aaPredicted RBP17.12■□□□□ 0.33
SFXN1-201ENST00000321442 MORF4L2Q15014 288 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 KIF19Q2TAC6 998 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 KCNV1Q6PIU1 500 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 PALB2Q86YC2 1186 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 EPS8L1Q8TE68 723 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 ZNF541Q9H0D2 1346 aa17.12■□□□□ 0.33
SFXN1-201ENST00000321442 NCALDP61601 193 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 MFSD7Q6UXD7 560 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 SIX6OS1Q8N1H7 587 aa17.11■□□□□ 0.33
SFXN1-201ENST00000321442 SNRNP27Q8WVK2 155 aaKnown RBP17.11■□□□□ 0.33
SFXN1-201ENST00000321442 MOV10L1Q9BXT6 1211 aaKnown RBP17.11■□□□□ 0.33
SFXN1-201ENST00000321442 SAE1Q9UBE0 346 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms