RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C TOS2P50078 622 aa3.77□□□□□ -1.81
GDE1YPL110C YDL057WQ07379 328 aa3.77□□□□□ -1.81
GDE1YPL110C ATO3Q12359 275 aa3.77□□□□□ -1.81
GDE1YPL110C YMR175W-AQ3E766 64 aa3.77□□□□□ -1.81
GDE1YPL110C CTF8P38877 133 aa3.77□□□□□ -1.81
GDE1YPL110C INP1Q03694 420 aa3.77□□□□□ -1.81
GDE1YPL110C YPS3Q12303 508 aa3.77□□□□□ -1.81
GDE1YPL110C YAL063C-AQ3E791 96 aa3.77□□□□□ -1.81
GDE1YPL110C YER134CP40081 178 aa3.76□□□□□ -1.81
GDE1YPL110C YPL073CP40323 161 aa3.76□□□□□ -1.81
GDE1YPL110C MRS3P10566 314 aa3.76□□□□□ -1.81
GDE1YPL110C MDM10P18409 493 aa3.76□□□□□ -1.81
GDE1YPL110C FIP1P45976 327 aa3.76□□□□□ -1.81
GDE1YPL110C TAD3Q9URQ3 322 aa3.76□□□□□ -1.81
GDE1YPL110C YBR144CP34215 104 aa3.76□□□□□ -1.81
GDE1YPL110C YHL018WP38744 120 aaPredicted RBP3.76□□□□□ -1.81
GDE1YPL110C MST28P39552 234 aa3.76□□□□□ -1.81
GDE1YPL110C YBR255C-AQ3E776 120 aa3.76□□□□□ -1.81
GDE1YPL110C CNE1P27825 502 aa3.75□□□□□ -1.81
GDE1YPL110C RRT5P43607 289 aa3.75□□□□□ -1.81
GDE1YPL110C YFR054CP43622 192 aa3.75□□□□□ -1.81
GDE1YPL110C RPS10BP46784 105 aaKnown RBP3.75□□□□□ -1.81
GDE1YPL110C YNL046WP53956 172 aa3.75□□□□□ -1.81
GDE1YPL110C RFM1Q12192 310 aa3.75□□□□□ -1.81
GDE1YPL110C YMC1P32331 307 aa3.75□□□□□ -1.81
GDE1YPL110C NRG2P38082 220 aa3.75□□□□□ -1.81
GDE1YPL110C LSM3P57743 89 aaKnown RBP3.75□□□□□ -1.81
GDE1YPL110C YLR346CQ06139 101 aa3.75□□□□□ -1.81
GDE1YPL110C NCE102Q12207 173 aaRIP-Chip data3.75□□□□□ -1.81not detected
GDE1YPL110C SMP1P38128 452 aa3.75□□□□□ -1.81
GDE1YPL110C YHR140WP38842 239 aa3.75□□□□□ -1.81
GDE1YPL110C YFL012WP43580 148 aa3.75□□□□□ -1.81
GDE1YPL110C RAF1Q06891 181 aa3.75□□□□□ -1.81
GDE1YPL110C TRP1P00912 224 aa3.74□□□□□ -1.81
GDE1YPL110C RFA2P26754 273 aaKnown RBP3.74□□□□□ -1.81
GDE1YPL110C OST1P41543 476 aaKnown RBP3.74□□□□□ -1.81
GDE1YPL110C EMI1Q04406 187 aa3.74□□□□□ -1.81
GDE1YPL110C YCR050CP25630 102 aa3.74□□□□□ -1.81
GDE1YPL110C SWD2P36104 329 aaPredicted RBP3.74□□□□□ -1.81
GDE1YPL110C GAT4P40569 121 aa3.74□□□□□ -1.81
GDE1YPL110C SDS23P53172 527 aa3.74□□□□□ -1.81
GDE1YPL110C FHN1P53279 174 aa3.74□□□□□ -1.81
GDE1YPL110C PBP4Q07362 185 aaKnown RBP3.74□□□□□ -1.81
GDE1YPL110C YCR024C-BQ3E7Z8 88 aa3.74□□□□□ -1.81
GDE1YPL110C YCL021W-AQ96VH3 125 aa3.74□□□□□ -1.81
GDE1YPL110C RPS2P25443 254 aaKnown RBP3.74□□□□□ -1.81
GDE1YPL110C GPX1P36014 167 aa3.74□□□□□ -1.81
GDE1YPL110C RIM9Q04734 239 aa3.74□□□□□ -1.81
GDE1YPL110C RNH203Q12338 110 aa3.74□□□□□ -1.81
GDE1YPL110C UBC4P15731 148 aa3.73□□□□□ -1.81
GDE1YPL110C SFT2P38166 215 aa3.73□□□□□ -1.81
GDE1YPL110C ODC2Q99297 307 aa3.73□□□□□ -1.81
GDE1YPL110C YOL162WP0CF19 215 aa3.73□□□□□ -1.81
GDE1YPL110C PUB1P32588 453 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
GDE1YPL110C RTG1P32607 177 aa3.73□□□□□ -1.81
GDE1YPL110C MRPS5P33759 307 aa3.73□□□□□ -1.81
GDE1YPL110C SHE1P38200 338 aa3.73□□□□□ -1.81
GDE1YPL110C YAR068WP39564 161 aa3.73□□□□□ -1.81
GDE1YPL110C YCR090CP25654 182 aaKnown RBP3.73□□□□□ -1.81
GDE1YPL110C YBR292CP38357 123 aa3.73□□□□□ -1.81
GDE1YPL110C PAU12P53343 120 aa3.73□□□□□ -1.81
GDE1YPL110C IES4Q08561 116 aa3.73□□□□□ -1.81
GDE1YPL110C SME1Q12330 94 aaPredicted RBP3.73□□□□□ -1.81
GDE1YPL110C YPL247CQ12523 523 aa3.73□□□□□ -1.81
GDE1YPL110C RPL30P14120 105 aaKnown RBP3.72□□□□□ -1.81
GDE1YPL110C OM14P38325 134 aa3.72□□□□□ -1.81
GDE1YPL110C YIL169CP40442 995 aa3.72□□□□□ -1.81
GDE1YPL110C DSK2P48510 373 aa3.72□□□□□ -1.81
GDE1YPL110C YPL062WQ02781 134 aa3.72□□□□□ -1.81
GDE1YPL110C SHH4Q06236 168 aa3.72□□□□□ -1.81
GDE1YPL110C MAK31P23059 88 aa3.72□□□□□ -1.81
GDE1YPL110C MRPL27P36526 146 aaPredicted RBP3.72□□□□□ -1.81
GDE1YPL110C HST4P53688 370 aa3.72□□□□□ -1.81
GDE1YPL110C MIX17Q03667 156 aa3.72□□□□□ -1.81
GDE1YPL110C NHP2P32495 156 aaPredicted RBP3.72□□□□□ -1.81
GDE1YPL110C MBB1P39534 108 aa3.72□□□□□ -1.81
GDE1YPL110C CPD1P53314 239 aa3.72□□□□□ -1.81
GDE1YPL110C IRC25Q07951 179 aa3.72□□□□□ -1.81
GDE1YPL110C YOR292CQ08743 309 aa3.72□□□□□ -1.81
GDE1YPL110C YPL038W-AQ3E7B4 63 aa3.72□□□□□ -1.81
GDE1YPL110C TIS11P47977 285 aa3.71□□□□□ -1.82
GDE1YPL110C POP3P53833 195 aaPredicted RBP3.71□□□□□ -1.82
GDE1YPL110C RPL14AP36105 138 aaKnown RBP3.71□□□□□ -1.82
GDE1YPL110C GPI18P38211 433 aa3.71□□□□□ -1.82
GDE1YPL110C SNF11P38956 169 aa3.71□□□□□ -1.82
GDE1YPL110C YEL028WP39989 153 aa3.71□□□□□ -1.82
GDE1YPL110C PAU4P53427 120 aa3.71□□□□□ -1.82
GDE1YPL110C RSM19P53733 91 aaPredicted RBP3.71□□□□□ -1.82
GDE1YPL110C TDA7P53882 636 aaPredicted RBP3.71□□□□□ -1.82
GDE1YPL110C PAU2P32612 120 aa3.71□□□□□ -1.82
GDE1YPL110C YAR029WP39549 74 aa3.71□□□□□ -1.82
GDE1YPL110C PEX17P40155 199 aa3.71□□□□□ -1.82
GDE1YPL110C TPC1P53257 314 aa3.71□□□□□ -1.82
GDE1YPL110C FSH2Q05015 223 aa3.71□□□□□ -1.82
GDE1YPL110C RRT7Q07829 113 aa3.71□□□□□ -1.82
GDE1YPL110C MSA1Q08471 629 aa3.71□□□□□ -1.82
GDE1YPL110C CSR2Q12734 1121 aa3.71□□□□□ -1.82
GDE1YPL110C RPS22BQ3E7Y3 130 aaKnown RBP3.71□□□□□ -1.82
GDE1YPL110C PAU24P38155 120 aa3.7□□□□□ -1.82
GDE1YPL110C MET32Q12041 191 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms