RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W TIR3P40552 269 aa1.56□□□□□ -2.16
VPS16YPL045W RPL33BP41056 107 aaKnown RBP1.56□□□□□ -2.16
VPS16YPL045W YJL027CP47063 138 aaPredicted RBP1.56□□□□□ -2.16
VPS16YPL045W BOL2P53082 120 aa1.56□□□□□ -2.16
VPS16YPL045W MRPS8Q03799 155 aa1.56□□□□□ -2.16
VPS16YPL045W SHH3Q04487 196 aa1.56□□□□□ -2.16
VPS16YPL045W HRD1Q08109 551 aa1.56□□□□□ -2.16
VPS16YPL045W VPS68Q12016 184 aa1.56□□□□□ -2.16
VPS16YPL045W PST2Q12335 198 aaKnown RBP1.56□□□□□ -2.16
VPS16YPL045W BEM2P39960 2167 aaKnown RBP1.56□□□□□ -2.16
VPS16YPL045W YBR220CP38318 560 aa1.56□□□□□ -2.16
VPS16YPL045W CUP9P41817 306 aa1.56□□□□□ -2.16
VPS16YPL045W CCC1P47818 322 aa1.56□□□□□ -2.16
VPS16YPL045W RPL22BP56628 122 aaKnown RBP1.56□□□□□ -2.16
VPS16YPL045W YKR005CQ02203 525 aa1.56□□□□□ -2.16
VPS16YPL045W YDL012CQ12489 107 aa1.56□□□□□ -2.16
VPS16YPL045W HSP30P25619 332 aa1.55□□□□□ -2.16
VPS16YPL045W FZF1P32805 299 aa1.55□□□□□ -2.16
VPS16YPL045W PAM17P36147 197 aa1.55□□□□□ -2.16
VPS16YPL045W SDH4P37298 181 aa1.55□□□□□ -2.16
VPS16YPL045W ERV15P38312 142 aa1.55□□□□□ -2.16
VPS16YPL045W VPS28Q02767 242 aa1.55□□□□□ -2.16
VPS16YPL045W YMR253CQ04835 414 aa1.55□□□□□ -2.16
VPS16YPL045W RFU1Q08003 200 aa1.55□□□□□ -2.16
VPS16YPL045W PRS3P38689 320 aaKnown RBP1.55□□□□□ -2.16
VPS16YPL045W AIM18P38884 321 aa1.55□□□□□ -2.16
VPS16YPL045W YEL028WP39989 153 aa1.55□□□□□ -2.16
VPS16YPL045W SPO73P40031 143 aa1.55□□□□□ -2.16
VPS16YPL045W DYN2Q02647 92 aa1.55□□□□□ -2.16
VPS16YPL045W RRT1P38192 103 aa1.54□□□□□ -2.16
VPS16YPL045W YER181CP40097 107 aa1.54□□□□□ -2.16
VPS16YPL045W YJL218WP40892 196 aaKnown RBP1.54□□□□□ -2.16
VPS16YPL045W YJL144WP47009 104 aa1.54□□□□□ -2.16
VPS16YPL045W YGL193CP53097 103 aa1.54□□□□□ -2.16
VPS16YPL045W SYM1Q06563 197 aa1.54□□□□□ -2.16
VPS16YPL045W ATG40Q99325 256 aa1.54□□□□□ -2.16
VPS16YPL045W FPR1P20081 114 aaKnown RBP1.54□□□□□ -2.16
VPS16YPL045W SUA7P29055 345 aaPredicted RBP1.54□□□□□ -2.16
VPS16YPL045W PEX4P29340 183 aa1.54□□□□□ -2.16
VPS16YPL045W PTC1P35182 281 aa1.54□□□□□ -2.16
VPS16YPL045W YNL217WP40152 326 aa1.54□□□□□ -2.16
VPS16YPL045W YDR366CP87287 132 aa1.54□□□□□ -2.16
VPS16YPL045W UBC7Q02159 165 aa1.54□□□□□ -2.16
VPS16YPL045W COF1Q03048 143 aaKnown RBP1.54□□□□□ -2.16
VPS16YPL045W YDR278CQ05612 105 aa1.54□□□□□ -2.16
VPS16YPL045W IRC23Q08416 157 aa1.54□□□□□ -2.16
VPS16YPL045W YLR236CA0A023PZG4 107 aa1.53□□□□□ -2.16
VPS16YPL045W RAD6P06104 172 aa1.53□□□□□ -2.16
VPS16YPL045W PHO85P17157 305 aa1.53□□□□□ -2.16
VPS16YPL045W SCL1P21243 252 aaKnown RBP1.53□□□□□ -2.16
VPS16YPL045W SPT14P32363 452 aa1.53□□□□□ -2.16
VPS16YPL045W HTD2P38790 280 aaKnown RBP1.53□□□□□ -2.16
VPS16YPL045W PHB1P40961 287 aa1.53□□□□□ -2.16
VPS16YPL045W YNL033WP53964 284 aa1.53□□□□□ -2.16
VPS16YPL045W YPD1Q07688 167 aa1.53□□□□□ -2.16
VPS16YPL045W CLB6P32943 380 aa1.52□□□□□ -2.17
VPS16YPL045W YOR062CP36025 268 aa1.52□□□□□ -2.17
VPS16YPL045W PIR1Q03178 341 aa1.52□□□□□ -2.17
VPS16YPL045W FMN1Q03778 218 aa1.52□□□□□ -2.17
VPS16YPL045W YDR102CQ03864 110 aa1.52□□□□□ -2.17
VPS16YPL045W SWC7Q06707 132 aa1.52□□□□□ -2.17
VPS16YPL045W EMC6Q12431 108 aa1.52□□□□□ -2.17
VPS16YPL045W OCA6Q12454 224 aa1.52□□□□□ -2.17
VPS16YPL045W SLH1P53327 1967 aaKnown RBP1.52□□□□□ -2.17
VPS16YPL045W RPC19P28000 142 aaKnown RBP1.52□□□□□ -2.17
VPS16YPL045W VMA22P38784 181 aa1.52□□□□□ -2.17
VPS16YPL045W YER135CP40082 130 aa1.52□□□□□ -2.17
VPS16YPL045W RIO2P40160 425 aaKnown RBP1.52□□□□□ -2.17
VPS16YPL045W GLC8P41818 229 aa1.52□□□□□ -2.17
VPS16YPL045W YDR391CQ04170 232 aa1.52□□□□□ -2.17
VPS16YPL045W SPC24Q04477 213 aa1.52□□□□□ -2.17
VPS16YPL045W LDB18Q07887 179 aa1.52□□□□□ -2.17
VPS16YPL045W PRM7Q12459 698 aa1.52□□□□□ -2.17
VPS16YPL045W YPR096CO13587 100 aa1.51□□□□□ -2.17
VPS16YPL045W RAS2P01120 322 aaKnown RBP1.51□□□□□ -2.17
VPS16YPL045W NHP6AP11632 93 aaKnown RBP1.51□□□□□ -2.17
VPS16YPL045W YBR209WP38311 105 aa1.51□□□□□ -2.17
VPS16YPL045W GPI2P46961 280 aa1.51□□□□□ -2.17
VPS16YPL045W YGR039WP53225 103 aa1.51□□□□□ -2.17
VPS16YPL045W HHO1P53551 258 aa1.51□□□□□ -2.17
VPS16YPL045W RCF2P53721 224 aa1.51□□□□□ -2.17
VPS16YPL045W RNH202Q05635 350 aa1.51□□□□□ -2.17
VPS16YPL045W YPR114WQ06107 315 aa1.51□□□□□ -2.17
VPS16YPL045W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
VPS16YPL045W YRA2P36036 203 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
VPS16YPL045W MRPL24P36525 258 aaPredicted RBP1.51□□□□□ -2.17
VPS16YPL045W SVP26P38869 228 aa1.51□□□□□ -2.17
VPS16YPL045W YEL073CP39974 107 aa1.51□□□□□ -2.17
VPS16YPL045W CIN5P40917 295 aa1.51□□□□□ -2.17
VPS16YPL045W CGI121Q03705 181 aaKnown RBP1.51□□□□□ -2.17
VPS16YPL045W RIM9Q04734 239 aa1.51□□□□□ -2.17
VPS16YPL045W RAD28Q12021 506 aa1.51□□□□□ -2.17
VPS16YPL045W YOR381W-AQ3E804 55 aa1.51□□□□□ -2.17
VPS16YPL045W POL2P21951 2222 aaKnown RBP1.51□□□□□ -2.17
VPS16YPL045W CYR1P08678 2026 aaKnown RBP1.5□□□□□ -2.17
VPS16YPL045W MSB2P32334 1306 aa1.5□□□□□ -2.17
VPS16YPL045W DDI2P0CH63 225 aa1.5□□□□□ -2.17
VPS16YPL045W DDI3P0CH64 225 aa1.5□□□□□ -2.17
VPS16YPL045W GPA2P10823 449 aa1.5□□□□□ -2.17
VPS16YPL045W SRP21P32342 167 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms