RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C QCR8P08525 94 aa1.11□□□□□ -2.23
RPB11YOL005C GCN3P14741 305 aa1.11□□□□□ -2.23
RPB11YOL005C TFC1P32367 649 aa1.11□□□□□ -2.23
RPB11YOL005C SPS18P32572 300 aa1.11□□□□□ -2.23
RPB11YOL005C YER135CP40082 130 aa1.11□□□□□ -2.23
RPB11YOL005C MGA1P53050 456 aa1.11□□□□□ -2.23
RPB11YOL005C NQM1P53228 333 aaPredicted RBP1.11□□□□□ -2.23
RPB11YOL005C GPI17Q04080 534 aa1.11□□□□□ -2.23
RPB11YOL005C YLR162WQ06235 118 aa1.11□□□□□ -2.23
RPB11YOL005C GGA1Q06336 557 aa1.11□□□□□ -2.23
RPB11YOL005C UIP4Q08926 304 aa1.11□□□□□ -2.23
RPB11YOL005C YPL225WQ08971 146 aaKnown RBP1.11□□□□□ -2.23
RPB11YOL005C YPL162CQ12042 273 aa1.11□□□□□ -2.23
RPB11YOL005C SIR2P06700 562 aa1.1□□□□□ -2.23
RPB11YOL005C YBL010CP32788 280 aa1.1□□□□□ -2.23
RPB11YOL005C SNC2P33328 115 aa1.1□□□□□ -2.23
RPB11YOL005C CLG1P35190 452 aa1.1□□□□□ -2.23
RPB11YOL005C UTP30P36144 274 aaKnown RBP1.1□□□□□ -2.23
RPB11YOL005C FIG1P38224 298 aa1.1□□□□□ -2.23
RPB11YOL005C UMP1P38293 148 aa1.1□□□□□ -2.23
RPB11YOL005C GVP36P40531 326 aaKnown RBP1.1□□□□□ -2.23
RPB11YOL005C GLR1P41921 483 aaKnown RBP1.1□□□□□ -2.23
RPB11YOL005C SBH2P52871 88 aa1.1□□□□□ -2.23
RPB11YOL005C DOC1P53068 250 aa1.1□□□□□ -2.23
RPB11YOL005C YGL235WP53071 178 aa1.1□□□□□ -2.23
RPB11YOL005C YNR064CP53750 290 aa1.1□□□□□ -2.23
RPB11YOL005C PDR17P53844 350 aa1.1□□□□□ -2.23
RPB11YOL005C SPC24Q04477 213 aa1.1□□□□□ -2.23
RPB11YOL005C YMR315WQ04869 349 aaKnown RBP1.1□□□□□ -2.23
RPB11YOL005C ATG38Q05789 226 aaKnown RBP1.1□□□□□ -2.23
RPB11YOL005C YPR127WQ06494 345 aa1.1□□□□□ -2.23
RPB11YOL005C FCY1Q12178 158 aa1.1□□□□□ -2.23
RPB11YOL005C RPL25P04456 142 aaKnown RBP1.09□□□□□ -2.23
RPB11YOL005C BET1P22804 142 aa1.09□□□□□ -2.23
RPB11YOL005C MRS4P23500 304 aa1.09□□□□□ -2.23
RPB11YOL005C YGL010WP25338 174 aa1.09□□□□□ -2.23
RPB11YOL005C TCA17P32613 152 aa1.09□□□□□ -2.23
RPB11YOL005C SRP102P36057 244 aaPredicted RBP1.09□□□□□ -2.23
RPB11YOL005C ECM4P36156 370 aa1.09□□□□□ -2.23
RPB11YOL005C IPT1P38954 527 aa1.09□□□□□ -2.23
RPB11YOL005C CWC23P52868 283 aaPredicted RBP1.09□□□□□ -2.23
RPB11YOL005C YGL101WP53144 215 aa1.09□□□□□ -2.23
RPB11YOL005C YDR274CP87283 123 aa1.09□□□□□ -2.23
RPB11YOL005C YMR099CQ03161 297 aaKnown RBP1.09□□□□□ -2.23
RPB11YOL005C DIG2Q03373 323 aaKnown RBP1.09□□□□□ -2.23
RPB11YOL005C RNH1Q04740 348 aa1.09□□□□□ -2.23
RPB11YOL005C YMR252CQ04814 134 aa1.09□□□□□ -2.23
RPB11YOL005C ELP6Q04868 273 aa1.09□□□□□ -2.23
RPB11YOL005C PST2Q12335 198 aaKnown RBP1.09□□□□□ -2.23
RPB11YOL005C YMR105W-AQ8TGS8 64 aa1.09□□□□□ -2.23
RPB11YOL005C YFR032C-BQ8TGU2 87 aa1.09□□□□□ -2.23
RPB11YOL005C RIB3Q99258 208 aa1.09□□□□□ -2.23
RPB11YOL005C URA2P07259 2214 aaKnown RBP1.08□□□□□ -2.24
RPB11YOL005C ADK1P07170 222 aaKnown RBP1.08□□□□□ -2.24
RPB11YOL005C RPL2AP0CX45 254 aaKnown RBP1.08□□□□□ -2.24
RPB11YOL005C RPL2BP0CX46 254 aaKnown RBP1.08□□□□□ -2.24
RPB11YOL005C URA5P13298 226 aaKnown RBP1.08□□□□□ -2.24
RPB11YOL005C RPL30P14120 105 aaKnown RBP1.08□□□□□ -2.24
RPB11YOL005C ARO7P32178 256 aa1.08□□□□□ -2.24
RPB11YOL005C ASF2P32448 525 aaPredicted RBP1.08□□□□□ -2.24
RPB11YOL005C RPL13BP40212 199 aaKnown RBP1.08□□□□□ -2.24
RPB11YOL005C DLS1P40366 167 aa1.08□□□□□ -2.24
RPB11YOL005C ERJ5P43613 295 aaPredicted RBP1.08□□□□□ -2.24
RPB11YOL005C IRC18P47056 224 aa1.08□□□□□ -2.24
RPB11YOL005C XPT1P47165 209 aa1.08□□□□□ -2.24
RPB11YOL005C NRK1P53915 240 aa1.08□□□□□ -2.24
RPB11YOL005C YKR005CQ02203 525 aa1.08□□□□□ -2.24
RPB11YOL005C YDC1Q02896 317 aa1.08□□□□□ -2.24
RPB11YOL005C MAK3Q03503 176 aa1.08□□□□□ -2.24
RPB11YOL005C AIM36Q03798 255 aa1.08□□□□□ -2.24
RPB11YOL005C YDR391CQ04170 232 aa1.08□□□□□ -2.24
RPB11YOL005C PRP11Q07350 266 aaPredicted RBP1.08□□□□□ -2.24
RPB11YOL005C YOL160WQ08321 113 aa1.08□□□□□ -2.24
RPB11YOL005C GRE1Q08969 168 aa1.08□□□□□ -2.24
RPB11YOL005C RPL13AQ12690 199 aaPredicted RBP1.08□□□□□ -2.24
RPB11YOL005C YOR192C-CQ3E736 78 aa1.08□□□□□ -2.24
RPB11YOL005C YLR099W-AQ3E798 87 aa1.08□□□□□ -2.24
RPB11YOL005C IDP1P21954 428 aaKnown RBP1.07□□□□□ -2.24
RPB11YOL005C TMA19P35691 167 aaKnown RBP1.07□□□□□ -2.24
RPB11YOL005C GEP7P53171 287 aa1.07□□□□□ -2.24
RPB11YOL005C YGR042WP53227 271 aa1.07□□□□□ -2.24
RPB11YOL005C GAL83Q04739 417 aa1.07□□□□□ -2.24
RPB11YOL005C ANT1Q06497 328 aa1.07□□□□□ -2.24
RPB11YOL005C YOL118CQ08259 102 aa1.07□□□□□ -2.24
RPB11YOL005C YOR289WQ12012 251 aaPredicted RBP1.07□□□□□ -2.24
RPB11YOL005C MPD1Q12404 318 aaKnown RBP1.07□□□□□ -2.24
RPB11YOL005C HUT1Q12520 339 aa1.07□□□□□ -2.24
RPB11YOL005C YOS1Q3E834 85 aa1.07□□□□□ -2.24
RPB11YOL005C ODC2Q99297 307 aa1.07□□□□□ -2.24
RPB11YOL005C CKS1P20486 150 aaKnown RBP1.06□□□□□ -2.24
RPB11YOL005C BUD23P25627 275 aaPredicted RBP1.06□□□□□ -2.24
RPB11YOL005C YKL102CP34249 101 aa1.06□□□□□ -2.24
RPB11YOL005C YRA2P36036 203 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
RPB11YOL005C YBR285WP38354 144 aa1.06□□□□□ -2.24
RPB11YOL005C EGD2P38879 174 aaKnown RBP1.06□□□□□ -2.24
RPB11YOL005C FIP1P45976 327 aa1.06□□□□□ -2.24
RPB11YOL005C YGR050CP53231 118 aa1.06□□□□□ -2.24
RPB11YOL005C PAU12P53343 120 aa1.06□□□□□ -2.24
RPB11YOL005C LSM7P53905 115 aaKnown RBP1.06□□□□□ -2.24
RPB11YOL005C HSK3P69852 69 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms