RNA–Protein interactions for RNA: YNL250W

RAD50, Transcript of Subunit of MRX complex with Mre11p and Xrs2p, yeast

Gene RAD50, Length 3,939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD50	YNL250W	YHL042W	P38729	150 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	NSA2	P40078	261 aa	Known RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	CUP9	P41817	306 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	MPA43	P53583	542 aa	Predicted RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	YNL033W	P53964	284 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	YMR099C	Q03161	297 aa	Known RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	IRC23	Q08416	157 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	YOR015W	Q12169	119 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	SEC14	P24280	304 aa	Known RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	ARC19	P33204	171 aa	Known RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	YHL018W	P38744	120 aa	Predicted RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	HPA3	P39979	161 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	BRX1	Q08235	291 aa	Known RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	MDM35	O60200	86 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	MAK31	P23059	88 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
RAD50	YNL250W	PLP1	Q04004	230 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	YPR127W	Q06494	345 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	YLR053C	Q12026	108 aa		0.83	□□□□□ -2.28
RAD50	YNL250W	PST2	Q12335	198 aa	Known RBP	0.83	□□□□□ -2.28
RAD50	YNL250W	NUF2	P33895	451 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	CPR5	P35176	225 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	RRT1	P38192	103 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	SRP14	P38985	146 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	MPM1	P40364	252 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	SBH2	P52871	88 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	YPR174C	Q06616	221 aa	Predicted RBP	0.82	□□□□□ -2.28
RAD50	YNL250W	STF2	P16965	84 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	UBC6	P33296	250 aa	Predicted RBP	0.82	□□□□□ -2.28
RAD50	YNL250W	SRL3	P36167	246 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	PAC10	P48363	199 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	CWC27	Q02770	301 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	YMR253C	Q04835	414 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	NSL1	Q12143	216 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	YOR214C	Q12282	236 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	FLO9	P39712	1322 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	YOL162W	P0CF19	215 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	GPA2	P10823	449 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	UTP11	P34247	250 aa	Predicted RBP	0.82	□□□□□ -2.28
RAD50	YNL250W	YPL073C	P40323	161 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	YGL235W	P53071	178 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	YMR252C	Q04814	134 aa		0.82	□□□□□ -2.28
RAD50	YNL250W	PRP11	Q07350	266 aa	Predicted RBP	0.82	□□□□□ -2.28
RAD50	YNL250W	PAM17	P36147	197 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	CSH1	P38287	376 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	AME1	P38313	324 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	EDC3	P39998	551 aa	Known RBP	0.81	□□□□□ -2.28
RAD50	YNL250W	YFL065C	P43539	102 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	YFH7	P43591	353 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	DML1	Q03652	475 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	YHP1	Q04116	353 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	FYV12	Q08559	129 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	YPR013C	Q12145	317 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	EFG1	Q3E705	233 aa	Known RBP	0.81	□□□□□ -2.28
RAD50	YNL250W	ACC1	Q00955	2233 aa	Known RBP	0.81	□□□□□ -2.28
RAD50	YNL250W	UBR1	P19812	1950 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	CMD1	P06787	147 aa	Known RBP	0.81	□□□□□ -2.28
RAD50	YNL250W	RPB7	P34087	171 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	ORM1	P53224	222 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	THI74	Q04083	370 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	GAL83	Q04739	417 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	COX8	P04039	78 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	UBI4	P0CG63	381 aa	Known RBP	0.81	□□□□□ -2.28
RAD50	YNL250W	NSP1	P14907	823 aa	Known RBP	0.81	□□□□□ -2.28
RAD50	YNL250W	HSP30	P25619	332 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	NSE4	P43124	402 aa		0.81	□□□□□ -2.28
RAD50	YNL250W	ALB1	P47019	175 aa	Predicted RBP	0.81	□□□□□ -2.28
RAD50	YNL250W	SFK1	P35735	353 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	UBC7	Q02159	165 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	YDR102C	Q03864	110 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	YHR007C-A	Q07074	71 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	YLR046C	Q12253	270 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	PEX11	Q12462	236 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	FPR1	P20081	114 aa	Known RBP	0.8	□□□□□ -2.28
RAD50	YNL250W	YGL101W	P53144	215 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	AQY2	P0CD90	149 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	YCR023C	P25351	611 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	YEL073C	P39974	107 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	CCS1	P40202	249 aa	Known RBP	0.8	□□□□□ -2.28
RAD50	YNL250W	YKR005C	Q02203	525 aa		0.8	□□□□□ -2.28
RAD50	YNL250W	DIG2	Q03373	323 aa	Known RBP	0.8	□□□□□ -2.28
RAD50	YNL250W	CCC1	P47818	322 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	NQM1	P53228	333 aa	Predicted RBP	0.79	□□□□□ -2.28
RAD50	YNL250W	TMA20	P89886	181 aa	Predicted RBP	0.79	□□□□□ -2.28
RAD50	YNL250W	FIT2	Q08906	153 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	YNL146C-A	Q3E7Z1	64 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	QCR2	P07257	368 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	UBC8	P28263	218 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	YEL008W	P40001	126 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	RIO2	P40160	425 aa	Known RBP	0.79	□□□□□ -2.28
RAD50	YNL250W	HYR1	P40581	163 aa	Known RBP	0.79	□□□□□ -2.28
RAD50	YNL250W	RIM9	Q04734	239 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	UPS1	Q05776	175 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	TVP23	P38962	199 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	DLS1	P40366	167 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	RCE1	Q03530	315 aa		0.79	□□□□□ -2.28
RAD50	YNL250W	INO4	P13902	151 aa		0.78	□□□□□ -2.28
RAD50	YNL250W	STP22	P25604	385 aa		0.78	□□□□□ -2.28
RAD50	YNL250W	YBL010C	P32788	280 aa		0.78	□□□□□ -2.28
RAD50	YNL250W	GLC8	P41818	229 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms