RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A PRM8P53174 237 aa2.14□□□□□ -2.07
YSF3YNL138W-A MAK3Q03503 176 aa2.14□□□□□ -2.07
YSF3YNL138W-A LOA1Q06508 300 aa2.14□□□□□ -2.07
YSF3YNL138W-A FEX1Q08913 375 aa2.14□□□□□ -2.07
YSF3YNL138W-A YPL257WQ08974 193 aa2.14□□□□□ -2.07
YSF3YNL138W-A FEX2Q08991 375 aa2.14□□□□□ -2.07
YSF3YNL138W-A RDI1Q12434 202 aa2.14□□□□□ -2.07
YSF3YNL138W-A YBL008W-AQ3E821 79 aa2.14□□□□□ -2.07
YSF3YNL138W-A PET20Q99373 253 aa2.14□□□□□ -2.07
YSF3YNL138W-A CDC28P00546 298 aaKnown RBP2.13□□□□□ -2.07
YSF3YNL138W-A KIN28P06242 306 aa2.13□□□□□ -2.07
YSF3YNL138W-A MRS1P07266 363 aa2.13□□□□□ -2.07
YSF3YNL138W-A SEC4P07560 215 aaKnown RBP2.13□□□□□ -2.07
YSF3YNL138W-A RPS28BP0C0X0 67 aaKnown RBP2.13□□□□□ -2.07
YSF3YNL138W-A SNF4P12904 322 aa2.13□□□□□ -2.07
YSF3YNL138W-A SPS18P32572 300 aa2.13□□□□□ -2.07
YSF3YNL138W-A SRY1P36007 326 aa2.13□□□□□ -2.07
YSF3YNL138W-A YKR032WP36127 104 aa2.13□□□□□ -2.07
YSF3YNL138W-A IPT1P38954 527 aa2.13□□□□□ -2.07
YSF3YNL138W-A YGL034CP53186 121 aa2.13□□□□□ -2.07
YSF3YNL138W-A NQM1P53228 333 aaPredicted RBP2.13□□□□□ -2.07
YSF3YNL138W-A ALG9P53868 555 aaKnown RBP2.13□□□□□ -2.07
YSF3YNL138W-A ATG39Q06159 398 aa2.13□□□□□ -2.07
YSF3YNL138W-A ATG5Q12380 294 aa2.13□□□□□ -2.07
YSF3YNL138W-A RPS28AQ3E7X9 67 aaPredicted RBP2.13□□□□□ -2.07
YSF3YNL138W-A RPL25P04456 142 aaKnown RBP2.12□□□□□ -2.07
YSF3YNL138W-A SEN2P16658 377 aa2.12□□□□□ -2.07
YSF3YNL138W-A MAG1P22134 296 aaKnown RBP2.12□□□□□ -2.07
YSF3YNL138W-A ARO7P32178 256 aa2.12□□□□□ -2.07
YSF3YNL138W-A CPR5P35176 225 aa2.12□□□□□ -2.07
YSF3YNL138W-A VMA22P38784 181 aa2.12□□□□□ -2.07
YSF3YNL138W-A PEX17P40155 199 aa2.12□□□□□ -2.07
YSF3YNL138W-A LSM7P53905 115 aaKnown RBP2.12□□□□□ -2.07
YSF3YNL138W-A COG5P53951 403 aa2.12□□□□□ -2.07
YSF3YNL138W-A HSK3P69852 69 aa2.12□□□□□ -2.07
YSF3YNL138W-A PKR1Q03880 122 aaKnown RBP2.12□□□□□ -2.07
YSF3YNL138W-A UPS1Q05776 175 aa2.12□□□□□ -2.07
YSF3YNL138W-A YOR283WQ12040 230 aaKnown RBP2.12□□□□□ -2.07
YSF3YNL138W-A SMT3Q12306 101 aaKnown RBP2.12□□□□□ -2.07
YSF3YNL138W-A HUT1Q12520 339 aa2.12□□□□□ -2.07
YSF3YNL138W-A SEC22P22214 214 aa2.11□□□□□ -2.07
YSF3YNL138W-A UPS2P35200 230 aa2.11□□□□□ -2.07
YSF3YNL138W-A YKR045CP36138 183 aa2.11□□□□□ -2.07
YSF3YNL138W-A RPS20P38701 121 aaKnown RBP2.11□□□□□ -2.07
YSF3YNL138W-A TEM1P38987 245 aa2.11□□□□□ -2.07
YSF3YNL138W-A YJL218WP40892 196 aaKnown RBP2.11□□□□□ -2.07
YSF3YNL138W-A CIN5P40917 295 aa2.11□□□□□ -2.07
YSF3YNL138W-A RPL9BP51401 191 aaKnown RBP2.11□□□□□ -2.07
YSF3YNL138W-A YGL204CP53089 101 aa2.11□□□□□ -2.07
YSF3YNL138W-A YNL184CP53876 108 aa2.11□□□□□ -2.07
YSF3YNL138W-A TMA20P89886 181 aaPredicted RBP2.11□□□□□ -2.07
YSF3YNL138W-A DYN3Q04949 312 aa2.11□□□□□ -2.07
YSF3YNL138W-A YLR031WQ07978 186 aa2.11□□□□□ -2.07
YSF3YNL138W-A TIM22Q12328 207 aa2.11□□□□□ -2.07
YSF3YNL138W-A PBI2P0CT04 75 aaKnown RBP2.1□□□□□ -2.07
YSF3YNL138W-A ANB1P19211 157 aa2.1□□□□□ -2.07
YSF3YNL138W-A IDP1P21954 428 aaKnown RBP2.1□□□□□ -2.07
YSF3YNL138W-A CNB1P25296 175 aa2.1□□□□□ -2.07
YSF3YNL138W-A AHC2P25649 128 aa2.1□□□□□ -2.07
YSF3YNL138W-A OCH1P31755 480 aa2.1□□□□□ -2.07
YSF3YNL138W-A YKR041WP36134 250 aa2.1□□□□□ -2.07
YSF3YNL138W-A NVJ1P38881 321 aa2.1□□□□□ -2.07
YSF3YNL138W-A YNL200CP40165 246 aaKnown RBP2.1□□□□□ -2.07
YSF3YNL138W-A VMA10P48836 114 aaKnown RBP2.1□□□□□ -2.07
YSF3YNL138W-A UBC12P52491 188 aa2.1□□□□□ -2.07
YSF3YNL138W-A YMD8Q03697 442 aa2.1□□□□□ -2.07
YSF3YNL138W-A HNT1Q04344 158 aaKnown RBP2.1□□□□□ -2.07
YSF3YNL138W-A GAL83Q04739 417 aa2.1□□□□□ -2.07
YSF3YNL138W-A IRC23Q08416 157 aa2.1□□□□□ -2.07
YSF3YNL138W-A YPR013CQ12145 317 aa2.1□□□□□ -2.07
YSF3YNL138W-A ATP14Q12349 124 aa2.1□□□□□ -2.07
YSF3YNL138W-A ISD11Q6Q560 94 aa2.1□□□□□ -2.07
YSF3YNL138W-A IGO2Q9P305 131 aa2.1□□□□□ -2.07
YSF3YNL138W-A HIS3P06633 220 aa2.09□□□□□ -2.07
YSF3YNL138W-A ADK1P07170 222 aaKnown RBP2.09□□□□□ -2.07
YSF3YNL138W-A PET54P10834 293 aa2.09□□□□□ -2.07
YSF3YNL138W-A UBC8P28263 218 aa2.09□□□□□ -2.07
YSF3YNL138W-A OAC1P32332 324 aa2.09□□□□□ -2.07
YSF3YNL138W-A YER076CP40049 302 aa2.09□□□□□ -2.07
YSF3YNL138W-A HPM1P40481 377 aa2.09□□□□□ -2.07
YSF3YNL138W-A CAT5P41735 233 aa2.09□□□□□ -2.07
YSF3YNL138W-A RBL2P48606 106 aaKnown RBP2.09□□□□□ -2.07
YSF3YNL138W-A ERG25P53045 309 aa2.09□□□□□ -2.07
YSF3YNL138W-A YGR219WP53307 113 aa2.09□□□□□ -2.07
YSF3YNL138W-A PGA1P53896 198 aa2.09□□□□□ -2.07
YSF3YNL138W-A YOR020W-AQ3E824 90 aa2.09□□□□□ -2.07
YSF3YNL138W-A HTL1Q9URQ5 78 aa2.09□□□□□ -2.07
YSF3YNL138W-A CDC7P06243 507 aa2.08□□□□□ -2.08
YSF3YNL138W-A ADH3P07246 375 aaKnown RBP2.08□□□□□ -2.08
YSF3YNL138W-A FCY2P17064 533 aa2.08□□□□□ -2.08
YSF3YNL138W-A RNP1P32385 249 aa2.08□□□□□ -2.08
YSF3YNL138W-A DOG2P38773 246 aa2.08□□□□□ -2.08
YSF3YNL138W-A DOG1P38774 246 aa2.08□□□□□ -2.08
YSF3YNL138W-A RIO2P40160 425 aaKnown RBP2.08□□□□□ -2.08
YSF3YNL138W-A YJL028WP47062 111 aa2.08□□□□□ -2.08
YSF3YNL138W-A AIM25P47140 327 aa2.08□□□□□ -2.08
YSF3YNL138W-A YGR050CP53231 118 aa2.08□□□□□ -2.08
YSF3YNL138W-A SAY1P53324 424 aa2.08□□□□□ -2.08
YSF3YNL138W-A ERV29P53337 310 aa2.08□□□□□ -2.08
YSF3YNL138W-A RAV2Q03956 351 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms