RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W TY1B-DR3Q99231 1755 aa3.51□□□□□ -1.85
ROT1YMR200W MID2P36027 376 aa3.51□□□□□ -1.85
ROT1YMR200W MPM1P40364 252 aa3.51□□□□□ -1.85
ROT1YMR200W SAY1P53324 424 aa3.51□□□□□ -1.85
ROT1YMR200W YOR268CQ08734 132 aa3.51□□□□□ -1.85
ROT1YMR200W DUR1,2P32528 1835 aaKnown RBP3.51□□□□□ -1.85
ROT1YMR200W TY1B-DR5P0C2I2 1755 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-DR6P0C2I3 1755 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-LR2P0C2I5 1755 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-LR3P0C2I6 1755 aaKnown RBP3.51□□□□□ -1.85
ROT1YMR200W TY1B-PR1P0C2I9 1755 aaKnown RBP3.51□□□□□ -1.85
ROT1YMR200W TY1B-PR2P0C2J0 1756 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-PR3P0C2J1 1755 aaKnown RBP3.51□□□□□ -1.85
ROT1YMR200W TY1B-JR1P47098 1755 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-ML2Q03434 1755 aaKnown RBP3.51□□□□□ -1.85
ROT1YMR200W TY1B-ER1Q03612 1755 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-ML1Q04711 1755 aaKnown RBP3.51□□□□□ -1.85
ROT1YMR200W TY1B-GR2Q12269 1755 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-OLQ12273 1755 aa3.51□□□□□ -1.85
ROT1YMR200W TY1B-PLQ12414 1755 aaKnown RBP3.51□□□□□ -1.85
ROT1YMR200W ESC1Q03661 1658 aaKnown RBP3.5□□□□□ -1.85
ROT1YMR200W NUP159P40477 1460 aa3.5□□□□□ -1.85
ROT1YMR200W SDH4P37298 181 aa3.5□□□□□ -1.85
ROT1YMR200W YBR090CP38253 122 aa3.5□□□□□ -1.85
ROT1YMR200W YEL073CP39974 107 aa3.5□□□□□ -1.85
ROT1YMR200W DAD3P69850 94 aa3.5□□□□□ -1.85
ROT1YMR200W DML1Q03652 475 aa3.5□□□□□ -1.85
ROT1YMR200W DDP1Q99321 188 aaKnown RBP3.5□□□□□ -1.85
ROT1YMR200W MDH2P22133 377 aa3.49□□□□□ -1.85
ROT1YMR200W YCR050CP25630 102 aa3.49□□□□□ -1.85
ROT1YMR200W FZF1P32805 299 aa3.49□□□□□ -1.85
ROT1YMR200W YBR242WP38331 238 aa3.49□□□□□ -1.85
ROT1YMR200W YNL217WP40152 326 aa3.49□□□□□ -1.85
ROT1YMR200W YOR097CQ12274 175 aaPredicted RBP3.49□□□□□ -1.85
ROT1YMR200W VTH1P40438 1549 aa3.49□□□□□ -1.85
ROT1YMR200W VTH2P40890 1549 aa3.49□□□□□ -1.85
ROT1YMR200W MYO4P32492 1471 aa3.48□□□□□ -1.85
ROT1YMR200W GEA2P39993 1459 aaKnown RBP3.48□□□□□ -1.85
ROT1YMR200W SEC59P20048 519 aa3.48□□□□□ -1.85
ROT1YMR200W MRPL15P36523 253 aa3.48□□□□□ -1.85
ROT1YMR200W YHR180WP38868 163 aa3.48□□□□□ -1.85
ROT1YMR200W TVP23P38962 199 aa3.48□□□□□ -1.85
ROT1YMR200W YPI1P43587 155 aa3.48□□□□□ -1.85
ROT1YMR200W HAL1Q01766 294 aa3.48□□□□□ -1.85
ROT1YMR200W UPS1Q05776 175 aa3.48□□□□□ -1.85
ROT1YMR200W RAS2P01120 322 aaKnown RBP3.47□□□□□ -1.85
ROT1YMR200W UBC5P15732 148 aa3.47□□□□□ -1.85
ROT1YMR200W AIM18P38884 321 aa3.47□□□□□ -1.85
ROT1YMR200W YAR029WP39549 74 aa3.47□□□□□ -1.85
ROT1YMR200W GNA1P43577 159 aaPredicted RBP3.47□□□□□ -1.85
ROT1YMR200W DIE2P50076 525 aa3.47□□□□□ -1.85
ROT1YMR200W DOC1P53068 250 aa3.47□□□□□ -1.85
ROT1YMR200W YMR252CQ04814 134 aa3.47□□□□□ -1.85
ROT1YMR200W ATG10Q07879 167 aa3.47□□□□□ -1.85
ROT1YMR200W CSI2Q08054 341 aa3.47□□□□□ -1.85
ROT1YMR200W IRC23Q08416 157 aa3.47□□□□□ -1.85
ROT1YMR200W UIP4Q08926 304 aa3.47□□□□□ -1.85
ROT1YMR200W YPR063CQ12160 140 aa3.47□□□□□ -1.85
ROT1YMR200W BNI1P41832 1953 aa3.47□□□□□ -1.85
ROT1YMR200W YOL162WP0CF19 215 aa3.46□□□□□ -1.86
ROT1YMR200W YET1P35723 206 aa3.46□□□□□ -1.86
ROT1YMR200W GAA1P39012 614 aa3.46□□□□□ -1.86
ROT1YMR200W YEA6P39953 335 aa3.46□□□□□ -1.86
ROT1YMR200W GRX5Q02784 150 aa3.46□□□□□ -1.86
ROT1YMR200W RCE1Q03530 315 aa3.46□□□□□ -1.86
ROT1YMR200W YOR381W-AQ3E804 55 aa3.46□□□□□ -1.86
ROT1YMR200W YKL068W-AQ3E826 78 aa3.46□□□□□ -1.86
ROT1YMR200W KRE5P22023 1365 aa3.46□□□□□ -1.86
ROT1YMR200W VPS15P22219 1454 aa3.46□□□□□ -1.86
ROT1YMR200W FLX1P40464 311 aa3.45□□□□□ -1.86
ROT1YMR200W YIR035CP40579 254 aa3.45□□□□□ -1.86
ROT1YMR200W NSE4P43124 402 aa3.45□□□□□ -1.86
ROT1YMR200W YFL012WP43580 148 aa3.45□□□□□ -1.86
ROT1YMR200W LSM8P47093 109 aaKnown RBP3.45□□□□□ -1.86
ROT1YMR200W YGR164WP53291 111 aa3.45□□□□□ -1.86
ROT1YMR200W YNR077CP53758 84 aa3.45□□□□□ -1.86
ROT1YMR200W FKS1P38631 1876 aaKnown RBP3.45□□□□□ -1.86
ROT1YMR200W SNQ2P32568 1501 aaKnown RBP3.44□□□□□ -1.86
ROT1YMR200W YRF1-1P0CX20 1796 aa3.44□□□□□ -1.86
ROT1YMR200W YRF1-5P0CX21 1796 aa3.44□□□□□ -1.86
ROT1YMR200W YRF1-8P0CX22 1796 aa3.44□□□□□ -1.86
ROT1YMR200W TY1B-JR2P47100 1755 aaKnown RBP3.44□□□□□ -1.86
ROT1YMR200W TY1B-ER2Q03619 1755 aa3.44□□□□□ -1.86
ROT1YMR200W TY1B-MR1Q04214 1755 aa3.44□□□□□ -1.86
ROT1YMR200W TY1B-MR2Q04670 1755 aaKnown RBP3.44□□□□□ -1.86
ROT1YMR200W TY1B-LR1Q12088 1755 aaKnown RBP3.44□□□□□ -1.86
ROT1YMR200W TY1B-NL1Q12112 1755 aa3.44□□□□□ -1.86
ROT1YMR200W TY1B-GR1Q12141 1755 aa3.44□□□□□ -1.86
ROT1YMR200W TY1B-BLQ12490 1755 aa3.44□□□□□ -1.86
ROT1YMR200W YAL064WP39711 94 aa3.44□□□□□ -1.86
ROT1YMR200W BAT2P47176 376 aaKnown RBP3.44□□□□□ -1.86
ROT1YMR200W MPC1P53157 130 aaKnown RBP3.44□□□□□ -1.86
ROT1YMR200W FEX1Q08913 375 aa3.44□□□□□ -1.86
ROT1YMR200W FEX2Q08991 375 aa3.44□□□□□ -1.86
ROT1YMR200W SCS22Q6Q595 175 aa3.44□□□□□ -1.86
ROT1YMR200W MMS1Q06211 1407 aa3.44□□□□□ -1.86
ROT1YMR200W HAP3P13434 144 aa3.43□□□□□ -1.86
ROT1YMR200W HYP2P23301 157 aaKnown RBP3.43□□□□□ -1.86
ROT1YMR200W RPL33BP41056 107 aaKnown RBP3.43□□□□□ -1.86
ROT1YMR200W PAM16P42949 149 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms